EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021374 (Gene tree)
Gene ID: 218210
Gene Symbol: Nup153
Alias: B130015D15Rik
Full Name: nucleoporin 153
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 48036 bases
Position: chr13:46679905-46727940
Accession: 2385621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000021803	zf-RanBP	PF00641.18	1.9e-40	1	4
ENSMUSP00000021803	zf-RanBP	PF00641.18	1.9e-40	2	4
ENSMUSP00000021803	zf-RanBP	PF00641.18	1.9e-40	3	4
ENSMUSP00000021803	zf-RanBP	PF00641.18	1.9e-40	4	4
ENSMUSP00000153686	zf-RanBP	PF00641.18	3.9e-32	1	3
ENSMUSP00000153686	zf-RanBP	PF00641.18	3.9e-32	2	3
ENSMUSP00000153686	zf-RanBP	PF00641.18	3.9e-32	3	3

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000182914	-	557	-	-	- (aa)	-	-
ENSMUST00000225894	-	610	-	ENSMUSP00000153196	203 (aa)	-	A0A286YCY7
ENSMUST00000182358	-	711	-	-	- (aa)	-	-
ENSMUST00000224186	-	554	-	-	- (aa)	-	-
ENSMUST00000182156	-	597	-	-	- (aa)	-	-
ENSMUST00000021803	-	6109	-	ENSMUSP00000021803	1462 (aa)	-	E9Q3G8
ENSMUST00000224062	-	766	-	ENSMUSP00000153069	256 (aa)	-	A0A286YCP2
ENSMUST00000183299	-	509	-	-	- (aa)	-	-
ENSMUST00000224203	-	909	-	ENSMUSP00000153686	303 (aa)	-	A0A286YE24

Gene Model

Click here to download ENSMUSG00000021374's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021374's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000021374	Nup153	99	82.023	ENSG00000124789	NUP153	99	81.887	Homo_sapiens
ENSMUSG00000021374	Nup153	59	47.034	ENSAPOG00000019495	nup153	99	40.853	Acanthochromis_polyacanthus
ENSMUSG00000021374	Nup153	99	79.292	ENSAMEG00000000721	NUP153	99	79.155	Ailuropoda_melanoleuca
ENSMUSG00000021374	Nup153	99	40.501	ENSACIG00000010784	nup153	85	42.264	Amphilophus_citrinellus
ENSMUSG00000021374	Nup153	59	48.998	ENSAOCG00000007098	nup153	99	39.484	Amphiprion_ocellaris
ENSMUSG00000021374	Nup153	99	39.263	ENSAPEG00000012075	nup153	99	40.090	Amphiprion_percula
ENSMUSG00000021374	Nup153	59	47.878	ENSATEG00000014134	nup153	99	41.505	Anabas_testudineus
ENSMUSG00000021374	Nup153	97	53.567	ENSACAG00000004118	NUP153	100	53.965	Anolis_carolinensis
ENSMUSG00000021374	Nup153	99	81.750	ENSANAG00000001808	NUP153	99	81.545	Aotus_nancymaae
ENSMUSG00000021374	Nup153	82	49.438	ENSACLG00000016592	nup153	99	40.155	Astatotilapia_calliptera
ENSMUSG00000021374	Nup153	85	54.167	ENSAMXG00000021025	nup153	99	41.513	Astyanax_mexicanus
ENSMUSG00000021374	Nup153	99	81.254	ENSBTAG00000017128	NUP153	100	80.904	Bos_taurus
ENSMUSG00000021374	Nup153	99	82.309	ENSCJAG00000006685	NUP153	99	81.626	Callithrix_jacchus
ENSMUSG00000021374	Nup153	99	80.573	ENSCAFG00000010146	NUP153	100	81.115	Canis_familiaris
ENSMUSG00000021374	Nup153	99	80.913	ENSCAFG00020010901	NUP153	99	81.322	Canis_lupus_dingo
ENSMUSG00000021374	Nup153	99	81.514	ENSCHIG00000023764	NUP153	100	81.094	Capra_hircus
ENSMUSG00000021374	Nup153	97	81.194	ENSTSYG00000001251	NUP153	98	80.777	Carlito_syrichta
ENSMUSG00000021374	Nup153	99	79.181	ENSCPOG00000004007	NUP153	99	78.620	Cavia_porcellus
ENSMUSG00000021374	Nup153	99	79.221	ENSCCAG00000024038	NUP153	100	79.892	Cebus_capucinus
ENSMUSG00000021374	Nup153	99	82.297	ENSCATG00000041429	NUP153	99	81.955	Cercocebus_atys
ENSMUSG00000021374	Nup153	99	80.109	ENSCLAG00000001915	NUP153	100	80.108	Chinchilla_lanigera
ENSMUSG00000021374	Nup153	99	82.148	ENSCSAG00000007624	NUP153	99	81.806	Chlorocebus_sabaeus
ENSMUSG00000021374	Nup153	86	56.627	ENSCHOG00000008316	-	99	56.549	Choloepus_hoffmanni
ENSMUSG00000021374	Nup153	65	65.500	ENSCHOG00000009608	-	97	52.772	Choloepus_hoffmanni
ENSMUSG00000021374	Nup153	87	65.500	ENSCHOG00000007137	-	99	56.388	Choloepus_hoffmanni
ENSMUSG00000021374	Nup153	87	65.000	ENSCHOG00000003510	-	99	56.672	Choloepus_hoffmanni
ENSMUSG00000021374	Nup153	68	65.500	ENSCHOG00000013388	-	99	61.871	Choloepus_hoffmanni
ENSMUSG00000021374	Nup153	98	66.834	ENSCPBG00000008333	NUP153	99	63.023	Chrysemys_picta_bellii
ENSMUSG00000021374	Nup153	99	78.742	ENSCANG00000033390	NUP153	99	78.401	Colobus_angolensis_palliatus
ENSMUSG00000021374	Nup153	99	89.959	ENSCGRG00001021016	Nup153	99	89.883	Cricetulus_griseus_chok1gshd
ENSMUSG00000021374	Nup153	97	89.797	ENSCGRG00000009244	Nup153	100	89.720	Cricetulus_griseus_crigri
ENSMUSG00000021374	Nup153	99	40.670	ENSCSEG00000017912	nup153	98	41.299	Cynoglossus_semilaevis
ENSMUSG00000021374	Nup153	92	39.581	ENSCVAG00000020646	nup153	98	39.837	Cyprinodon_variegatus
ENSMUSG00000021374	Nup153	99	41.366	ENSDARG00000099972	nup153	99	41.462	Danio_rerio
ENSMUSG00000021374	Nup153	99	80.597	ENSDNOG00000001153	NUP153	99	80.123	Dasypus_novemcinctus
ENSMUSG00000021374	Nup153	99	81.160	ENSDORG00000001736	Nup153	99	81.160	Dipodomys_ordii
ENSMUSG00000021374	Nup153	99	77.723	ENSETEG00000010324	-	76	85.882	Echinops_telfairi
ENSMUSG00000021374	Nup153	99	81.011	ENSEASG00005009945	NUP153	99	80.943	Equus_asinus_asinus
ENSMUSG00000021374	Nup153	99	80.943	ENSECAG00000016010	NUP153	99	80.874	Equus_caballus
ENSMUSG00000021374	Nup153	73	86.395	ENSEEUG00000010183	NUP153	75	86.395	Erinaceus_europaeus
ENSMUSG00000021374	Nup153	99	40.841	ENSELUG00000019108	nup153	99	41.096	Esox_lucius
ENSMUSG00000021374	Nup153	99	80.667	ENSFCAG00000011583	NUP153	99	80.463	Felis_catus
ENSMUSG00000021374	Nup153	95	59.391	ENSFALG00000013388	NUP153	99	57.928	Ficedula_albicollis
ENSMUSG00000021374	Nup153	92	50.355	ENSFHEG00000013401	nup153	99	50.119	Fundulus_heteroclitus
ENSMUSG00000021374	Nup153	86	46.471	ENSGMOG00000010422	nup153	81	46.079	Gadus_morhua
ENSMUSG00000021374	Nup153	99	61.747	ENSGALG00000012720	NUP153	99	61.476	Gallus_gallus
ENSMUSG00000021374	Nup153	89	51.235	ENSGAFG00000010927	nup153	99	39.363	Gambusia_affinis
ENSMUSG00000021374	Nup153	99	40.039	ENSGACG00000005389	nup153	99	40.669	Gasterosteus_aculeatus
ENSMUSG00000021374	Nup153	98	66.834	ENSGAGG00000022386	NUP153	99	62.980	Gopherus_agassizii
ENSMUSG00000021374	Nup153	99	81.271	ENSGGOG00000014261	NUP153	99	80.930	Gorilla_gorilla
ENSMUSG00000021374	Nup153	99	41.257	ENSHBUG00000002944	nup153	98	41.306	Haplochromis_burtoni
ENSMUSG00000021374	Nup153	99	79.740	ENSHGLG00000007924	NUP153	99	79.535	Heterocephalus_glaber_female
ENSMUSG00000021374	Nup153	99	79.740	ENSHGLG00100001529	NUP153	99	79.535	Heterocephalus_glaber_male
ENSMUSG00000021374	Nup153	99	38.758	ENSHCOG00000019361	nup153	99	39.448	Hippocampus_comes
ENSMUSG00000021374	Nup153	99	42.389	ENSIPUG00000014605	nup153	99	41.640	Ictalurus_punctatus
ENSMUSG00000021374	Nup153	97	81.476	ENSSTOG00000005807	NUP153	100	80.780	Ictidomys_tridecemlineatus
ENSMUSG00000021374	Nup153	99	80.825	ENSJJAG00000016760	Nup153	100	81.088	Jaculus_jaculus
ENSMUSG00000021374	Nup153	99	39.689	ENSKMAG00000006344	nup153	99	40.149	Kryptolebias_marmoratus
ENSMUSG00000021374	Nup153	99	40.491	ENSLBEG00000002982	nup153	98	41.136	Labrus_bergylta
ENSMUSG00000021374	Nup153	97	45.168	ENSLACG00000006480	NUP153	100	45.192	Latimeria_chalumnae
ENSMUSG00000021374	Nup153	99	45.771	ENSLOCG00000008267	nup153	99	45.199	Lepisosteus_oculatus
ENSMUSG00000021374	Nup153	99	80.027	ENSLAFG00000015905	NUP153	99	79.414	Loxodonta_africana
ENSMUSG00000021374	Nup153	99	82.433	ENSMFAG00000045732	NUP153	99	82.092	Macaca_fascicularis
ENSMUSG00000021374	Nup153	99	82.365	ENSMMUG00000001993	NUP153	99	82.023	Macaca_mulatta
ENSMUSG00000021374	Nup153	99	82.433	ENSMNEG00000038011	NUP153	99	82.092	Macaca_nemestrina
ENSMUSG00000021374	Nup153	99	82.297	ENSMLEG00000030776	NUP153	99	81.955	Mandrillus_leucophaeus
ENSMUSG00000021374	Nup153	99	39.678	ENSMAMG00000013184	nup153	98	40.759	Mastacembelus_armatus
ENSMUSG00000021374	Nup153	82	49.405	ENSMZEG00005004371	nup153	99	39.962	Maylandia_zebra
ENSMUSG00000021374	Nup153	97	60.096	ENSMGAG00000003139	NUP153	100	60.729	Meleagris_gallopavo
ENSMUSG00000021374	Nup153	99	88.984	ENSMAUG00000007737	Nup153	100	89.269	Mesocricetus_auratus
ENSMUSG00000021374	Nup153	99	82.490	ENSMICG00000006089	NUP153	99	82.421	Microcebus_murinus
ENSMUSG00000021374	Nup153	99	88.843	ENSMOCG00000007623	Nup153	99	88.422	Microtus_ochrogaster
ENSMUSG00000021374	Nup153	99	38.136	ENSMMOG00000019049	nup153	99	38.616	Mola_mola
ENSMUSG00000021374	Nup153	97	69.897	ENSMODG00000010951	NUP153	99	69.236	Monodelphis_domestica
ENSMUSG00000021374	Nup153	62	50.588	ENSMALG00000013995	nup153	99	41.062	Monopterus_albus
ENSMUSG00000021374	Nup153	100	97.747	MGP_CAROLIEiJ_G0018483	Nup153	100	97.747	Mus_caroli
ENSMUSG00000021374	Nup153	100	97.131	MGP_PahariEiJ_G0019551	Nup153	100	97.131	Mus_pahari
ENSMUSG00000021374	Nup153	100	98.701	MGP_SPRETEiJ_G0019363	Nup153	100	98.701	Mus_spretus
ENSMUSG00000021374	Nup153	99	79.703	ENSMLUG00000004775	NUP153	99	77.881	Myotis_lucifugus
ENSMUSG00000021374	Nup153	99	88.325	ENSNGAG00000013817	Nup153	99	83.699	Nannospalax_galili
ENSMUSG00000021374	Nup153	82	49.405	ENSNBRG00000012456	nup153	99	39.502	Neolamprologus_brichardi
ENSMUSG00000021374	Nup153	99	82.104	ENSNLEG00000001141	NUP153	99	81.762	Nomascus_leucogenys
ENSMUSG00000021374	Nup153	96	75.000	ENSMEUG00000012874	NUP153	79	85.185	Notamacropus_eugenii
ENSMUSG00000021374	Nup153	97	77.941	ENSOPRG00000006221	NUP153	86	75.537	Ochotona_princeps
ENSMUSG00000021374	Nup153	99	75.992	ENSODEG00000005620	NUP153	99	75.992	Octodon_degus
ENSMUSG00000021374	Nup153	99	41.514	ENSONIG00000002524	nup153	99	42.112	Oreochromis_niloticus
ENSMUSG00000021374	Nup153	98	69.849	ENSOANG00000011858	NUP153	99	63.970	Ornithorhynchus_anatinus
ENSMUSG00000021374	Nup153	99	77.941	ENSOCUG00000003064	NUP153	99	77.285	Oryctolagus_cuniculus
ENSMUSG00000021374	Nup153	99	39.337	ENSORLG00000012674	nup153	99	40.681	Oryzias_latipes
ENSMUSG00000021374	Nup153	97	48.837	ENSORLG00020006026	nup153	98	39.875	Oryzias_latipes_hni
ENSMUSG00000021374	Nup153	97	48.256	ENSORLG00015013823	nup153	98	40.162	Oryzias_latipes_hsok
ENSMUSG00000021374	Nup153	99	39.850	ENSOMEG00000012062	nup153	99	40.463	Oryzias_melastigma
ENSMUSG00000021374	Nup153	99	80.240	ENSOGAG00000014899	NUP153	99	80.107	Otolemur_garnettii
ENSMUSG00000021374	Nup153	99	78.818	ENSOARG00000011514	NUP153	100	79.101	Ovis_aries
ENSMUSG00000021374	Nup153	99	82.228	ENSPPAG00000029729	NUP153	99	81.887	Pan_paniscus
ENSMUSG00000021374	Nup153	99	79.918	ENSPPRG00000006160	NUP153	99	80.259	Panthera_pardus
ENSMUSG00000021374	Nup153	99	79.442	ENSPTIG00000017212	NUP153	99	79.782	Panthera_tigris_altaica
ENSMUSG00000021374	Nup153	99	82.433	ENSPTRG00000017752	NUP153	99	82.092	Pan_troglodytes
ENSMUSG00000021374	Nup153	99	82.433	ENSPANG00000015139	NUP153	99	82.092	Papio_anubis
ENSMUSG00000021374	Nup153	99	40.773	ENSPKIG00000001734	nup153	99	40.000	Paramormyrops_kingsleyae
ENSMUSG00000021374	Nup153	97	63.136	ENSPSIG00000017226	NUP153	100	62.586	Pelodiscus_sinensis
ENSMUSG00000021374	Nup153	99	40.373	ENSPMGG00000001716	nup153	99	39.923	Periophthalmus_magnuspinnatus
ENSMUSG00000021374	Nup153	99	90.103	ENSPEMG00000020772	Nup153	99	90.303	Peromyscus_maniculatus_bairdii
ENSMUSG00000021374	Nup153	63	34.928	ENSPMAG00000002487	-	100	36.691	Petromyzon_marinus
ENSMUSG00000021374	Nup153	99	69.501	ENSPCIG00000029680	NUP153	99	69.703	Phascolarctos_cinereus
ENSMUSG00000021374	Nup153	98	46.500	ENSPFOG00000013146	nup153	99	41.112	Poecilia_formosa
ENSMUSG00000021374	Nup153	96	47.000	ENSPMEG00000021677	nup153	98	39.449	Poecilia_mexicana
ENSMUSG00000021374	Nup153	99	40.074	ENSPREG00000007463	nup153	98	39.838	Poecilia_reticulata
ENSMUSG00000021374	Nup153	99	79.563	ENSPPYG00000016259	NUP153	99	78.317	Pongo_abelii
ENSMUSG00000021374	Nup153	99	75.248	ENSPCAG00000010444	NUP153	74	95.833	Procavia_capensis
ENSMUSG00000021374	Nup153	99	82.673	ENSPCOG00000014488	NUP153	99	79.754	Propithecus_coquereli
ENSMUSG00000021374	Nup153	99	81.683	ENSPVAG00000012632	NUP153	99	77.907	Pteropus_vampyrus
ENSMUSG00000021374	Nup153	99	41.092	ENSPNYG00000011225	nup153	99	39.847	Pundamilia_nyererei
ENSMUSG00000021374	Nup153	99	41.561	ENSPNAG00000024377	nup153	99	41.513	Pygocentrus_nattereri
ENSMUSG00000021374	Nup153	99	93.668	ENSRNOG00000001456	Nup153	100	93.801	Rattus_norvegicus
ENSMUSG00000021374	Nup153	99	81.314	ENSRBIG00000041878	NUP153	99	81.040	Rhinopithecus_bieti
ENSMUSG00000021374	Nup153	98	81.717	ENSRROG00000029849	NUP153	99	81.812	Rhinopithecus_roxellana
ENSMUSG00000021374	Nup153	99	82.514	ENSSBOG00000024532	NUP153	99	82.172	Saimiri_boliviensis_boliviensis
ENSMUSG00000021374	Nup153	98	50.674	ENSSHAG00000016087	-	97	66.337	Sarcophilus_harrisii
ENSMUSG00000021374	Nup153	99	40.764	ENSSFOG00015011040	nup153	99	41.568	Scleropages_formosus
ENSMUSG00000021374	Nup153	99	38.852	ENSSMAG00000008418	nup153	98	40.494	Scophthalmus_maximus
ENSMUSG00000021374	Nup153	64	51.220	ENSSDUG00000010779	nup153	99	40.753	Seriola_dumerili
ENSMUSG00000021374	Nup153	64	51.220	ENSSLDG00000012692	nup153	99	40.381	Seriola_lalandi_dorsalis
ENSMUSG00000021374	Nup153	97	72.033	ENSSARG00000013269	NUP153	100	72.241	Sorex_araneus
ENSMUSG00000021374	Nup153	99	61.538	ENSSPUG00000016687	NUP153	98	60.931	Sphenodon_punctatus
ENSMUSG00000021374	Nup153	63	46.977	ENSSPAG00000014945	nup153	98	40.335	Stegastes_partitus
ENSMUSG00000021374	Nup153	99	81.750	ENSSSCG00000026034	NUP153	99	81.408	Sus_scrofa
ENSMUSG00000021374	Nup153	95	60.804	ENSTGUG00000005917	NUP153	100	58.533	Taeniopygia_guttata
ENSMUSG00000021374	Nup153	99	38.297	ENSTRUG00000010163	nup153	99	39.358	Takifugu_rubripes
ENSMUSG00000021374	Nup153	99	39.309	ENSTNIG00000009182	nup153	99	39.375	Tetraodon_nigroviridis
ENSMUSG00000021374	Nup153	90	76.744	ENSTBEG00000004161	NUP153	68	80.170	Tupaia_belangeri
ENSMUSG00000021374	Nup153	88	78.049	ENSTTRG00000007060	NUP153	88	79.509	Tursiops_truncatus
ENSMUSG00000021374	Nup153	99	79.412	ENSUAMG00000015215	NUP153	98	75.497	Ursus_americanus
ENSMUSG00000021374	Nup153	99	79.412	ENSUMAG00000017135	NUP153	99	76.141	Ursus_maritimus
ENSMUSG00000021374	Nup153	99	82.178	ENSVPAG00000002072	NUP153	99	81.750	Vicugna_pacos
ENSMUSG00000021374	Nup153	99	81.118	ENSVVUG00000003265	NUP153	100	80.818	Vulpes_vulpes
ENSMUSG00000021374	Nup153	99	46.941	ENSXETG00000014197	nup153	99	46.841	Xenopus_tropicalis
ENSMUSG00000021374	Nup153	99	39.644	ENSXCOG00000020098	nup153	99	39.962	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000278	mitotic cell cycle	-	ISO	Process
GO:0003682	chromatin binding	-	ISO	Function
GO:0003690	double-stranded DNA binding	-	ISO	Function
GO:0005515	protein binding	10891500.	IPI	Function
GO:0005642	annulate lamellae	-	ISO	Component
GO:0005643	nuclear pore	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0008139	nuclear localization sequence binding	21873635.	IBA	Function
GO:0008139	nuclear localization sequence binding	-	ISO	Function
GO:0008270	zinc ion binding	-	ISO	Function
GO:0008536	Ran GTPase binding	-	ISO	Function
GO:0017056	structural constituent of nuclear pore	21873635.	IBA	Function
GO:0017056	structural constituent of nuclear pore	-	ISO	Function
GO:0031965	nuclear membrane	-	ISO	Component
GO:0032991	protein-containing complex	-	ISO	Component
GO:0034399	nuclear periphery	-	ISO	Component
GO:0042405	nuclear inclusion body	-	ISO	Component
GO:0042802	identical protein binding	-	ISO	Function
GO:0043495	protein membrane anchor	-	ISO	Function
GO:0044613	nuclear pore central transport channel	21873635.	IBA	Component
GO:0044615	nuclear pore nuclear basket	21873635.	IBA	Component
GO:0044615	nuclear pore nuclear basket	-	ISO	Component
GO:0046832	negative regulation of RNA export from nucleus	-	ISO	Process
GO:0051292	nuclear pore complex assembly	-	ISO	Process
GO:1990875	nucleoplasmic side of nuclear pore	-	ISO	Component