EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021470 (Gene tree)
Gene ID: 76251
Gene Symbol: Ercc6l2
Alias: 0610007P08Rik|1700019D06Rik|9330134C04Rik
Full Name: excision repair cross-complementing rodent repair deficiency%2C complementation group 6 like 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 85063 bases
Position: chr13:63815240-63900302
Accession: 1923501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000069488	ResIII	PF04851.15	3.2e-11	1	1
ENSMUSP00000021925	ResIII	PF04851.15	2.2e-10	1	1
ENSMUSP00000021926	ResIII	PF04851.15	1.3e-09	1	1
ENSMUSP00000021925	DEAD	PF00270.29	6.1e-07	1	1
ENSMUSP00000069488	DEAD	PF00270.29	7.6e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000109776	-	963	-	-	- (aa)	-	-
ENSMUST00000222855	-	1889	-	-	- (aa)	-	-
ENSMUST00000159957	-	2117	-	ENSMUSP00000124912	205 (aa)	-	F6TW36
ENSMUST00000222300	-	3858	-	-	- (aa)	-	-
ENSMUST00000067821	-	2743	XM_006517451	ENSMUSP00000069488	699 (aa)	XP_006517514	Q9JIM3
ENSMUST00000143449	-	2866	-	-	- (aa)	-	-
ENSMUST00000095724	-	5879	XM_006517450	ENSMUSP00000093392	42 (aa)	XP_006517513	E9QPI9
ENSMUST00000162086	-	1309	-	-	- (aa)	-	-
ENSMUST00000142827	-	759	-	ENSMUSP00000115796	152 (aa)	-	F6SJP9
ENSMUST00000021925	-	1828	-	ENSMUSP00000021925	589 (aa)	-	G8JL31
ENSMUST00000144763	-	1820	-	ENSMUSP00000152142	273 (aa)	-	Q9JIM3
ENSMUST00000021926	-	1592	-	ENSMUSP00000021926	467 (aa)	-	Q9JIM3

Gene Model

Click here to download ENSMUSG00000021470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021470's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000021470	Ercc6l2	79	30.353	ENSMUSG00000031099	Smarca1	71	30.174
ENSMUSG00000021470	Ercc6l2	79	30.021	ENSMUSG00000028089	Chd1l	50	32.657

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000021470	Ercc6l2	100	89.158	ENSG00000182150	ERCC6L2	100	96.341	Homo_sapiens
ENSMUSG00000021470	Ercc6l2	100	82.899	ENSAMEG00000011657	ERCC6L2	100	86.179	Ailuropoda_melanoleuca
ENSMUSG00000021470	Ercc6l2	99	75.036	ENSAPLG00000006105	ERCC6L2	99	75.036	Anas_platyrhynchos
ENSMUSG00000021470	Ercc6l2	98	75.912	ENSACAG00000012947	ERCC6L2	100	75.912	Anolis_carolinensis
ENSMUSG00000021470	Ercc6l2	95	62.481	ENSACLG00000015088	ercc6l2	66	62.780	Astatotilapia_calliptera
ENSMUSG00000021470	Ercc6l2	100	88.857	ENSCJAG00000008862	ERCC6L2	98	88.857	Callithrix_jacchus
ENSMUSG00000021470	Ercc6l2	99	87.000	ENSCAFG00000001219	ERCC6L2	70	87.000	Canis_familiaris
ENSMUSG00000021470	Ercc6l2	100	88.143	ENSTSYG00000013871	ERCC6L2	99	88.143	Carlito_syrichta
ENSMUSG00000021470	Ercc6l2	91	80.562	ENSCAPG00000009212	ERCC6L2	100	80.562	Cavia_aperea
ENSMUSG00000021470	Ercc6l2	99	86.227	ENSCPOG00000004544	-	98	84.582	Cavia_porcellus
ENSMUSG00000021470	Ercc6l2	100	88.730	ENSCCAG00000026980	ERCC6L2	98	88.730	Cebus_capucinus
ENSMUSG00000021470	Ercc6l2	100	76.000	ENSCHOG00000006282	ERCC6L2	98	76.000	Choloepus_hoffmanni
ENSMUSG00000021470	Ercc6l2	100	88.445	ENSCANG00000039934	ERCC6L2	98	88.445	Colobus_angolensis_palliatus
ENSMUSG00000021470	Ercc6l2	100	92.704	ENSCGRG00001022738	Ercc6l2	99	92.704	Cricetulus_griseus_chok1gshd
ENSMUSG00000021470	Ercc6l2	91	93.443	ENSCGRG00000015854	Ercc6l2	66	94.727	Cricetulus_griseus_crigri
ENSMUSG00000021470	Ercc6l2	98	86.433	ENSDORG00000010788	Ercc6l2	99	86.871	Dipodomys_ordii
ENSMUSG00000021470	Ercc6l2	99	83.429	ENSETEG00000010686	ERCC6L2	98	83.429	Echinops_telfairi
ENSMUSG00000021470	Ercc6l2	85	90.323	ENSEEUG00000009341	ERCC6L2	99	69.900	Erinaceus_europaeus
ENSMUSG00000021470	Ercc6l2	99	76.778	ENSFALG00000003400	ERCC6L2	64	76.778	Ficedula_albicollis
ENSMUSG00000021470	Ercc6l2	99	86.981	ENSFDAG00000000805	ERCC6L2	99	86.981	Fukomys_damarensis
ENSMUSG00000021470	Ercc6l2	92	63.256	ENSGMOG00000007751	ercc6l2	63	63.256	Gadus_morhua
ENSMUSG00000021470	Ercc6l2	91	65.888	ENSGACG00000006992	ercc6l2	56	68.352	Gasterosteus_aculeatus
ENSMUSG00000021470	Ercc6l2	100	88.730	ENSGGOG00000002705	ERCC6L2	98	88.730	Gorilla_gorilla
ENSMUSG00000021470	Ercc6l2	80	94.915	ENSHGLG00000009488	ERCC6L2	95	93.370	Heterocephalus_glaber_female
ENSMUSG00000021470	Ercc6l2	100	87.019	ENSJJAG00000018150	Ercc6l2	100	87.019	Jaculus_jaculus
ENSMUSG00000021470	Ercc6l2	100	86.486	ENSLAFG00000013092	ERCC6L2	100	86.486	Loxodonta_africana
ENSMUSG00000021470	Ercc6l2	100	88.017	ENSMNEG00000035630	ERCC6L2	98	88.017	Macaca_nemestrina
ENSMUSG00000021470	Ercc6l2	100	88.302	ENSMLEG00000019530	ERCC6L2	98	88.302	Mandrillus_leucophaeus
ENSMUSG00000021470	Ercc6l2	98	94.006	ENSMAUG00000004820	-	66	94.909	Mesocricetus_auratus
ENSMUSG00000021470	Ercc6l2	100	89.872	ENSMICG00000029160	ERCC6L2	98	89.872	Microcebus_murinus
ENSMUSG00000021470	Ercc6l2	100	92.934	ENSMOCG00000019362	-	100	92.934	Microtus_ochrogaster
ENSMUSG00000021470	Ercc6l2	98	61.416	ENSMMOG00000001419	ercc6l2	59	61.416	Mola_mola
ENSMUSG00000021470	Ercc6l2	98	63.453	ENSMALG00000016933	ercc6l2	60	67.468	Monopterus_albus
ENSMUSG00000021470	Ercc6l2	100	98.856	MGP_CAROLIEiJ_G0018635	-	100	98.856	Mus_caroli
ENSMUSG00000021470	Ercc6l2	100	98.140	MGP_PahariEiJ_G0019699	-	100	98.392	Mus_pahari
ENSMUSG00000021470	Ercc6l2	100	99.572	MGP_SPRETEiJ_G0019515	-	100	99.572	Mus_spretus
ENSMUSG00000021470	Ercc6l2	91	89.461	ENSMPUG00000006738	ERCC6L2	68	87.695	Mustela_putorius_furo
ENSMUSG00000021470	Ercc6l2	100	85.328	ENSMLUG00000000845	ERCC6L2	98	85.328	Myotis_lucifugus
ENSMUSG00000021470	Ercc6l2	100	90.143	ENSNGAG00000016174	Ercc6l2	99	90.143	Nannospalax_galili
ENSMUSG00000021470	Ercc6l2	100	89.016	ENSNLEG00000016784	ERCC6L2	98	89.016	Nomascus_leucogenys
ENSMUSG00000021470	Ercc6l2	92	87.879	ENSOPRG00000011647	ERCC6L2	100	88.264	Ochotona_princeps
ENSMUSG00000021470	Ercc6l2	99	87.088	ENSODEG00000016588	ERCC6L2	98	89.486	Octodon_degus
ENSMUSG00000021470	Ercc6l2	99	60.169	ENSONIG00000015139	ercc6l2	100	60.311	Oreochromis_niloticus
ENSMUSG00000021470	Ercc6l2	100	88.160	ENSOCUG00000000442	-	100	88.160	Oryctolagus_cuniculus
ENSMUSG00000021470	Ercc6l2	97	62.958	ENSORLG00000004287	ercc6l2	63	62.958	Oryzias_latipes
ENSMUSG00000021470	Ercc6l2	91	65.421	ENSORLG00015010250	ercc6l2	58	68.301	Oryzias_latipes_hsok
ENSMUSG00000021470	Ercc6l2	91	91.589	ENSOGAG00000003146	ERCC6L2	66	91.980	Otolemur_garnettii
ENSMUSG00000021470	Ercc6l2	99	89.436	ENSOARG00000008546	ERCC6L2	71	88.841	Ovis_aries
ENSMUSG00000021470	Ercc6l2	100	89.158	ENSPPAG00000035061	ERCC6L2	98	89.158	Pan_paniscus
ENSMUSG00000021470	Ercc6l2	100	87.571	ENSPPRG00000019238	ERCC6L2	98	87.571	Panthera_pardus
ENSMUSG00000021470	Ercc6l2	100	87.143	ENSPTIG00000009148	ERCC6L2	98	87.143	Panthera_tigris_altaica
ENSMUSG00000021470	Ercc6l2	100	89.016	ENSPTRG00000048689	ERCC6L2	98	89.016	Pan_troglodytes
ENSMUSG00000021470	Ercc6l2	98	79.708	ENSPSIG00000010627	ERCC6L2	100	79.708	Pelodiscus_sinensis
ENSMUSG00000021470	Ercc6l2	98	92.679	ENSPEMG00000006631	-	66	94.000	Peromyscus_maniculatus_bairdii
ENSMUSG00000021470	Ercc6l2	98	81.871	ENSPCIG00000020095	-	58	81.871	Phascolarctos_cinereus
ENSMUSG00000021470	Ercc6l2	100	85.429	ENSPCOG00000026714	ERCC6L2	98	85.429	Propithecus_coquereli
ENSMUSG00000021470	Ercc6l2	92	88.345	ENSPVAG00000003926	ERCC6L2	98	80.171	Pteropus_vampyrus
ENSMUSG00000021470	Ercc6l2	95	62.519	ENSPNYG00000015347	ercc6l2	63	62.819	Pundamilia_nyererei
ENSMUSG00000021470	Ercc6l2	100	84.857	ENSRBIG00000018434	ERCC6L2	98	84.857	Rhinopithecus_bieti
ENSMUSG00000021470	Ercc6l2	100	88.302	ENSRROG00000029000	ERCC6L2	98	88.302	Rhinopithecus_roxellana
ENSMUSG00000021470	Ercc6l2	82	79.070	ENSSHAG00000000781	-	100	79.070	Sarcophilus_harrisii
ENSMUSG00000021470	Ercc6l2	99	61.702	ENSSLDG00000018663	ercc6l2	61	63.554	Seriola_lalandi_dorsalis
ENSMUSG00000021470	Ercc6l2	98	76.676	ENSSPUG00000004336	ERCC6L2	54	75.225	Sphenodon_punctatus
ENSMUSG00000021470	Ercc6l2	98	60.489	ENSSPAG00000004484	ercc6l2	60	60.632	Stegastes_partitus
ENSMUSG00000021470	Ercc6l2	98	76.608	ENSTGUG00000000524	ERCC6L2	100	76.608	Taeniopygia_guttata
ENSMUSG00000021470	Ercc6l2	98	59.568	ENSTRUG00000014634	ercc6l2	64	59.568	Takifugu_rubripes
ENSMUSG00000021470	Ercc6l2	82	88.083	ENSTBEG00000014213	ERCC6L2	87	94.231	Tupaia_belangeri
ENSMUSG00000021470	Ercc6l2	100	82.739	ENSTTRG00000005372	ERCC6L2	98	82.739	Tursiops_truncatus
ENSMUSG00000021470	Ercc6l2	92	90.676	ENSVPAG00000004701	ERCC6L2	99	89.082	Vicugna_pacos
ENSMUSG00000021470	Ercc6l2	97	72.018	ENSXETG00000014835	ercc6l2	63	72.018	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005813	centrosome	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0006281	DNA repair	-	IEA	Process
GO:0006974	cellular response to DNA damage stimulus	-	IEA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0019901	protein kinase binding	-	ISO	Function
GO:0032991	protein-containing complex	-	ISO	Component
GO:0034614	cellular response to reactive oxygen species	-	ISO	Process
GO:0036297	interstrand cross-link repair	-	ISO	Process