EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021576 (Gene tree)
Gene ID: 18570
Gene Symbol: Pdcd6
Alias: Alg2|MA-3|PS2|alg-2
Full Name: programmed cell death 6
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 14072
Position: chr13: 74303509-74317580
Accession: 109283
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000222759	-	1376	XM_006517156	ENSMUSP00000152458	189 (aa)	XP_006517219	P12815
ENSMUST00000220861	-	1262	-	-	- (aa)	-	-
ENSMUST00000222993	-	625	-	-	- (aa)	-	-
ENSMUST00000022060	-	1131	-	ENSMUSP00000022060	191 (aa)	-	P12815
ENSMUST00000223386	-	571	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000021576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021576's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000287	magnesium ion binding	27541325.	IDA	Function
GO:0001525	angiogenesis	-	IEA	Process
GO:0001938	positive regulation of endothelial cell proliferation	-	ISO	Process
GO:0005509	calcium ion binding	17214967.	IMP	Function
GO:0005509	calcium ion binding	-	ISO	Function
GO:0005515	protein binding	11591653.11606059.12522145.14561754.17889823.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	17214967.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005768	endosome	-	IEA	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0006886	intracellular protein transport	-	ISO	Process
GO:0006888	ER to Golgi vesicle-mediated transport	-	ISO	Process
GO:0006915	apoptotic process	8560270.	IDA	Process
GO:0006919	activation of cysteine-type endopeptidase activity involved in apoptotic process	14561754.	IDA	Process
GO:0010595	positive regulation of endothelial cell migration	-	ISO	Process
GO:0014029	neural crest formation	-	ISO	Process
GO:0014032	neural crest cell development	-	ISO	Process
GO:0016020	membrane	-	IEA	Component
GO:0030127	COPII vesicle coat	-	ISO	Component
GO:0030948	negative regulation of vascular endothelial growth factor receptor signaling pathway	-	ISO	Process
GO:0031410	cytoplasmic vesicle	-	ISO	Component
GO:0031463	Cul3-RING ubiquitin ligase complex	-	ISO	Component
GO:0032007	negative regulation of TOR signaling	-	ISO	Process
GO:0034605	cellular response to heat	-	ISO	Process
GO:0036324	vascular endothelial growth factor receptor-2 signaling pathway	-	ISO	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0042803	protein homodimerization activity	27541325.	IDA	Function
GO:0042803	protein homodimerization activity	10200558.	IPI	Function
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0043280	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process	-	ISO	Process
GO:0043495	protein membrane anchor	-	ISO	Function
GO:0045766	positive regulation of angiogenesis	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0046983	protein dimerization activity	10200558.	IPI	Function
GO:0046983	protein dimerization activity	-	ISO	Function
GO:0048208	COPII vesicle coating	-	ISO	Process
GO:0048306	calcium-dependent protein binding	17214967.	IPI	Function
GO:0048306	calcium-dependent protein binding	-	ISO	Function
GO:0051592	response to calcium ion	17214967.	IDA	Process
GO:0051898	negative regulation of protein kinase B signaling	-	ISO	Process
GO:0060090	molecular adaptor activity	-	ISO	Function
GO:0070971	endoplasmic reticulum exit site	-	ISO	Component
GO:1902527	positive regulation of protein monoubiquitination	-	ISO	Process