EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021621 (Gene tree)
Gene ID: 69085
Gene Symbol: Zcchc9
Alias: 1810019C21Rik
Full Name: zinc finger%2C CCHC domain containing 9
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 11173 bases
Position: chr13:91796533-91807705
Accession: 1916335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000022121	zf-CCHC	PF00098.23	2.4e-14	1	2
ENSMUSP00000022121	zf-CCHC	PF00098.23	2.4e-14	2	2
ENSMUSP00000065158	zf-CCHC	PF00098.23	9.4e-08	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000179368	-	349	-	-	- (aa)	-	-
ENSMUST00000070886	-	929	-	ENSMUSP00000065158	108 (aa)	-	F7A6K2
ENSMUST00000178084	-	931	-	-	- (aa)	-	-
ENSMUST00000022121	-	1541	XM_006517361	ENSMUSP00000022121	271 (aa)	XP_006517424	Q8R1J3
ENSMUST00000178637	-	3421	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000021621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021621's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000021621	Zcchc9	100	83.395	ENSG00000131732	ZCCHC9	100	83.395	Homo_sapiens
ENSMUSG00000021621	Zcchc9	100	52.174	ENSAPOG00000010630	zcchc9	100	53.261	Acanthochromis_polyacanthus
ENSMUSG00000021621	Zcchc9	100	82.288	ENSAMEG00000015854	ZCCHC9	100	82.288	Ailuropoda_melanoleuca
ENSMUSG00000021621	Zcchc9	100	53.480	ENSACIG00000008121	zcchc9	100	53.480	Amphilophus_citrinellus
ENSMUSG00000021621	Zcchc9	100	52.672	ENSAOCG00000011664	zcchc9	100	52.669	Amphiprion_ocellaris
ENSMUSG00000021621	Zcchc9	100	53.237	ENSAPEG00000021681	zcchc9	95	53.237	Amphiprion_percula
ENSMUSG00000021621	Zcchc9	100	52.158	ENSATEG00000004480	zcchc9	100	52.158	Anabas_testudineus
ENSMUSG00000021621	Zcchc9	98	63.281	ENSAPLG00000005968	ZCCHC9	99	78.014	Anas_platyrhynchos
ENSMUSG00000021621	Zcchc9	100	70.438	ENSACAG00000010965	ZCCHC9	100	68.248	Anolis_carolinensis
ENSMUSG00000021621	Zcchc9	100	68.750	ENSANAG00000022269	-	100	68.750	Aotus_nancymaae
ENSMUSG00000021621	Zcchc9	100	82.288	ENSANAG00000021689	-	100	82.288	Aotus_nancymaae
ENSMUSG00000021621	Zcchc9	100	51.418	ENSACLG00000009042	zcchc9	95	51.943	Astatotilapia_calliptera
ENSMUSG00000021621	Zcchc9	88	49.587	ENSAMXG00000043747	zcchc9	87	49.587	Astyanax_mexicanus
ENSMUSG00000021621	Zcchc9	63	67.647	ENSAMXG00000008493	zcchc9	93	44.364	Astyanax_mexicanus
ENSMUSG00000021621	Zcchc9	100	81.919	ENSBTAG00000005265	ZCCHC9	100	81.919	Bos_taurus
ENSMUSG00000021621	Zcchc9	100	83.026	ENSCJAG00000042621	ZCCHC9	100	83.026	Callithrix_jacchus
ENSMUSG00000021621	Zcchc9	100	82.288	ENSCAFG00000008703	ZCCHC9	100	82.288	Canis_familiaris
ENSMUSG00000021621	Zcchc9	100	82.288	ENSCAFG00020002911	ZCCHC9	100	82.288	Canis_lupus_dingo
ENSMUSG00000021621	Zcchc9	100	81.550	ENSCHIG00000024514	ZCCHC9	100	81.550	Capra_hircus
ENSMUSG00000021621	Zcchc9	100	67.159	ENSTSYG00000034641	-	100	66.421	Carlito_syrichta
ENSMUSG00000021621	Zcchc9	100	79.336	ENSTSYG00000012423	-	99	79.336	Carlito_syrichta
ENSMUSG00000021621	Zcchc9	100	82.407	ENSCAPG00000005358	-	100	82.407	Cavia_aperea
ENSMUSG00000021621	Zcchc9	100	82.407	ENSCPOG00000003947	ZCCHC9	100	82.407	Cavia_porcellus
ENSMUSG00000021621	Zcchc9	100	83.395	ENSCCAG00000034082	ZCCHC9	100	83.395	Cebus_capucinus
ENSMUSG00000021621	Zcchc9	100	81.181	ENSCATG00000042586	-	100	81.181	Cercocebus_atys
ENSMUSG00000021621	Zcchc9	100	87.963	ENSCLAG00000005289	ZCCHC9	100	87.963	Chinchilla_lanigera
ENSMUSG00000021621	Zcchc9	100	80.812	ENSCSAG00000014955	-	100	80.812	Chlorocebus_sabaeus
ENSMUSG00000021621	Zcchc9	100	78.967	ENSCSAG00000019139	-	100	78.598	Chlorocebus_sabaeus
ENSMUSG00000021621	Zcchc9	100	81.550	ENSCHOG00000005268	ZCCHC9	100	81.550	Choloepus_hoffmanni
ENSMUSG00000021621	Zcchc9	100	75.646	ENSCPBG00000010819	ZCCHC9	100	75.646	Chrysemys_picta_bellii
ENSMUSG00000021621	Zcchc9	100	41.007	ENSCING00000008173	-	78	54.286	Ciona_intestinalis
ENSMUSG00000021621	Zcchc9	100	37.410	ENSCSAVG00000010478	-	83	47.872	Ciona_savignyi
ENSMUSG00000021621	Zcchc9	100	81.550	ENSCANG00000025716	-	100	81.550	Colobus_angolensis_palliatus
ENSMUSG00000021621	Zcchc9	100	85.609	ENSCGRG00001018367	Zcchc9	100	85.609	Cricetulus_griseus_chok1gshd
ENSMUSG00000021621	Zcchc9	100	86.111	ENSCGRG00000016428	Zcchc9	100	86.111	Cricetulus_griseus_crigri
ENSMUSG00000021621	Zcchc9	100	53.480	ENSCSEG00000007145	zcchc9	100	53.480	Cynoglossus_semilaevis
ENSMUSG00000021621	Zcchc9	100	52.536	ENSCVAG00000019704	zcchc9	100	52.536	Cyprinodon_variegatus
ENSMUSG00000021621	Zcchc9	98	52.060	ENSDARG00000007531	zcchc9	99	50.376	Danio_rerio
ENSMUSG00000021621	Zcchc9	100	81.550	ENSDNOG00000016708	ZCCHC9	100	81.550	Dasypus_novemcinctus
ENSMUSG00000021621	Zcchc9	100	87.963	ENSDORG00000001300	Zcchc9	100	87.963	Dipodomys_ordii
ENSMUSG00000021621	Zcchc9	100	67.159	ENSETEG00000003838	ZCCHC9	100	67.159	Echinops_telfairi
ENSMUSG00000021621	Zcchc9	64	57.971	ENSEBUG00000015943	zcchc9	84	45.894	Eptatretus_burgeri
ENSMUSG00000021621	Zcchc9	100	81.919	ENSEASG00005004088	ZCCHC9	100	81.919	Equus_asinus_asinus
ENSMUSG00000021621	Zcchc9	100	82.657	ENSECAG00000023186	ZCCHC9	100	82.657	Equus_caballus
ENSMUSG00000021621	Zcchc9	100	70.229	ENSEEUG00000010726	-	100	83.217	Erinaceus_europaeus
ENSMUSG00000021621	Zcchc9	93	43.972	ENSELUG00000005654	zcchc9	100	45.515	Esox_lucius
ENSMUSG00000021621	Zcchc9	100	82.288	ENSFCAG00000033419	ZCCHC9	100	82.288	Felis_catus
ENSMUSG00000021621	Zcchc9	100	84.259	ENSFDAG00000000163	-	100	84.259	Fukomys_damarensis
ENSMUSG00000021621	Zcchc9	100	51.399	ENSFHEG00000012337	zcchc9	100	52.555	Fundulus_heteroclitus
ENSMUSG00000021621	Zcchc9	100	62.963	ENSGMOG00000016323	zcchc9	97	60.194	Gadus_morhua
ENSMUSG00000021621	Zcchc9	100	75.000	ENSGALG00000015603	ZCCHC9	100	57.934	Gallus_gallus
ENSMUSG00000021621	Zcchc9	100	50.916	ENSGACG00000015540	zcchc9	100	51.282	Gasterosteus_aculeatus
ENSMUSG00000021621	Zcchc9	87	74.043	ENSGAGG00000014018	ZCCHC9	96	74.043	Gopherus_agassizii
ENSMUSG00000021621	Zcchc9	100	83.395	ENSGGOG00000013790	ZCCHC9	100	83.395	Gorilla_gorilla
ENSMUSG00000021621	Zcchc9	100	49.618	ENSHBUG00000007612	zcchc9	98	58.974	Haplochromis_burtoni
ENSMUSG00000021621	Zcchc9	100	86.111	ENSHGLG00000005793	-	100	86.111	Heterocephalus_glaber_female
ENSMUSG00000021621	Zcchc9	100	86.111	ENSHGLG00100001090	-	100	86.111	Heterocephalus_glaber_male
ENSMUSG00000021621	Zcchc9	100	51.648	ENSHCOG00000001696	zcchc9	100	52.941	Hippocampus_comes
ENSMUSG00000021621	Zcchc9	96	48.077	ENSIPUG00000008877	zcchc9	99	48.148	Ictalurus_punctatus
ENSMUSG00000021621	Zcchc9	100	84.259	ENSSTOG00000001407	ZCCHC9	100	84.259	Ictidomys_tridecemlineatus
ENSMUSG00000021621	Zcchc9	100	88.889	ENSJJAG00000015479	Zcchc9	100	88.889	Jaculus_jaculus
ENSMUSG00000021621	Zcchc9	100	51.087	ENSKMAG00000008955	zcchc9	100	52.518	Kryptolebias_marmoratus
ENSMUSG00000021621	Zcchc9	100	52.174	ENSLBEG00000007610	zcchc9	100	52.536	Labrus_bergylta
ENSMUSG00000021621	Zcchc9	100	61.232	ENSLACG00000009223	ZCCHC9	100	61.232	Latimeria_chalumnae
ENSMUSG00000021621	Zcchc9	100	54.244	ENSLOCG00000005331	zcchc9	100	54.244	Lepisosteus_oculatus
ENSMUSG00000021621	Zcchc9	100	81.550	ENSLAFG00000012763	ZCCHC9	100	81.550	Loxodonta_africana
ENSMUSG00000021621	Zcchc9	100	81.181	ENSMFAG00000001943	ZCCHC9	100	81.181	Macaca_fascicularis
ENSMUSG00000021621	Zcchc9	100	81.181	ENSMMUG00000020655	ZCCHC9	100	80.812	Macaca_mulatta
ENSMUSG00000021621	Zcchc9	100	81.181	ENSMNEG00000040582	-	100	81.181	Macaca_nemestrina
ENSMUSG00000021621	Zcchc9	100	81.181	ENSMLEG00000038748	-	100	81.181	Mandrillus_leucophaeus
ENSMUSG00000021621	Zcchc9	100	52.174	ENSMAMG00000011669	zcchc9	100	52.536	Mastacembelus_armatus
ENSMUSG00000021621	Zcchc9	100	51.773	ENSMZEG00005011747	zcchc9	94	52.297	Maylandia_zebra
ENSMUSG00000021621	Zcchc9	89	58.506	ENSMGAG00000006841	ZCCHC9	100	58.506	Meleagris_gallopavo
ENSMUSG00000021621	Zcchc9	100	82.657	ENSMAUG00000022026	Zcchc9	100	82.657	Mesocricetus_auratus
ENSMUSG00000021621	Zcchc9	100	80.443	ENSMICG00000029554	-	100	80.443	Microcebus_murinus
ENSMUSG00000021621	Zcchc9	100	70.339	ENSMICG00000016266	-	100	66.790	Microcebus_murinus
ENSMUSG00000021621	Zcchc9	100	87.963	ENSMOCG00000012433	Zcchc9	100	87.963	Microtus_ochrogaster
ENSMUSG00000021621	Zcchc9	100	53.929	ENSMMOG00000010601	zcchc9	100	53.929	Mola_mola
ENSMUSG00000021621	Zcchc9	72	56.436	ENSMODG00000004970	-	99	77.000	Monodelphis_domestica
ENSMUSG00000021621	Zcchc9	100	71.587	ENSMODG00000020261	-	100	70.480	Monodelphis_domestica
ENSMUSG00000021621	Zcchc9	100	49.587	ENSMALG00000004220	zcchc9	100	50.178	Monopterus_albus
ENSMUSG00000021621	Zcchc9	100	98.148	MGP_CAROLIEiJ_G0018764	Zcchc9	100	98.148	Mus_caroli
ENSMUSG00000021621	Zcchc9	100	99.074	MGP_PahariEiJ_G0015843	Zcchc9	100	99.074	Mus_pahari
ENSMUSG00000021621	Zcchc9	100	99.074	MGP_SPRETEiJ_G0019648	Zcchc9	100	99.074	Mus_spretus
ENSMUSG00000021621	Zcchc9	86	81.897	ENSMPUG00000008276	ZCCHC9	90	81.897	Mustela_putorius_furo
ENSMUSG00000021621	Zcchc9	100	80.812	ENSMLUG00000001886	ZCCHC9	100	80.812	Myotis_lucifugus
ENSMUSG00000021621	Zcchc9	100	87.963	ENSNGAG00000017736	Zcchc9	100	87.963	Nannospalax_galili
ENSMUSG00000021621	Zcchc9	100	49.618	ENSNBRG00000005258	zcchc9	92	60.000	Neolamprologus_brichardi
ENSMUSG00000021621	Zcchc9	100	81.919	ENSNLEG00000029214	ZCCHC9	100	81.919	Nomascus_leucogenys
ENSMUSG00000021621	Zcchc9	100	68.864	ENSMEUG00000011005	ZCCHC9	100	68.864	Notamacropus_eugenii
ENSMUSG00000021621	Zcchc9	100	73.801	ENSOPRG00000004474	ZCCHC9	100	73.432	Ochotona_princeps
ENSMUSG00000021621	Zcchc9	100	85.185	ENSODEG00000004349	-	100	85.185	Octodon_degus
ENSMUSG00000021621	Zcchc9	100	52.297	ENSONIG00000011366	zcchc9	90	52.650	Oreochromis_niloticus
ENSMUSG00000021621	Zcchc9	100	76.015	ENSOANG00000014769	ZCCHC9	100	76.015	Ornithorhynchus_anatinus
ENSMUSG00000021621	Zcchc9	100	77.491	ENSOCUG00000011215	ZCCHC9	100	77.491	Oryctolagus_cuniculus
ENSMUSG00000021621	Zcchc9	100	51.838	ENSORLG00000020135	zcchc9	100	52.747	Oryzias_latipes
ENSMUSG00000021621	Zcchc9	100	51.838	ENSORLG00020018090	zcchc9	100	52.747	Oryzias_latipes_hni
ENSMUSG00000021621	Zcchc9	100	52.206	ENSORLG00015005137	zcchc9	100	53.114	Oryzias_latipes_hsok
ENSMUSG00000021621	Zcchc9	100	52.399	ENSOMEG00000004423	zcchc9	100	52.920	Oryzias_melastigma
ENSMUSG00000021621	Zcchc9	100	81.181	ENSOGAG00000002543	-	100	81.181	Otolemur_garnettii
ENSMUSG00000021621	Zcchc9	100	68.266	ENSOGAG00000026127	-	100	68.266	Otolemur_garnettii
ENSMUSG00000021621	Zcchc9	100	70.221	ENSOGAG00000026324	-	100	70.221	Otolemur_garnettii
ENSMUSG00000021621	Zcchc9	99	82.022	ENSOARG00000015219	ZCCHC9	98	82.022	Ovis_aries
ENSMUSG00000021621	Zcchc9	100	82.288	ENSPPAG00000041281	ZCCHC9	100	82.288	Pan_paniscus
ENSMUSG00000021621	Zcchc9	100	81.919	ENSPPRG00000023474	ZCCHC9	100	81.919	Panthera_pardus
ENSMUSG00000021621	Zcchc9	100	81.181	ENSPTIG00000017303	ZCCHC9	100	81.181	Panthera_tigris_altaica
ENSMUSG00000021621	Zcchc9	100	82.657	ENSPTRG00000017047	ZCCHC9	100	82.657	Pan_troglodytes
ENSMUSG00000021621	Zcchc9	100	81.181	ENSPANG00000013570	-	100	81.181	Papio_anubis
ENSMUSG00000021621	Zcchc9	100	55.882	ENSPKIG00000006659	zcchc9	100	55.882	Paramormyrops_kingsleyae
ENSMUSG00000021621	Zcchc9	100	71.587	ENSPSIG00000015854	ZCCHC9	100	72.325	Pelodiscus_sinensis
ENSMUSG00000021621	Zcchc9	100	51.648	ENSPMGG00000000044	zcchc9	100	51.282	Periophthalmus_magnuspinnatus
ENSMUSG00000021621	Zcchc9	100	91.667	ENSPEMG00000016614	Zcchc9	100	91.667	Peromyscus_maniculatus_bairdii
ENSMUSG00000021621	Zcchc9	100	70.480	ENSPCIG00000013208	ZCCHC9	95	69.742	Phascolarctos_cinereus
ENSMUSG00000021621	Zcchc9	100	54.244	ENSPFOG00000004364	zcchc9	100	54.244	Poecilia_formosa
ENSMUSG00000021621	Zcchc9	100	54.244	ENSPMEG00000007672	zcchc9	100	54.244	Poecilia_mexicana
ENSMUSG00000021621	Zcchc9	100	54.244	ENSPREG00000013644	zcchc9	100	54.244	Poecilia_reticulata
ENSMUSG00000021621	Zcchc9	100	83.026	ENSPPYG00000015604	ZCCHC9	100	83.026	Pongo_abelii
ENSMUSG00000021621	Zcchc9	100	68.702	ENSPCOG00000018504	ZCCHC9	100	83.916	Propithecus_coquereli
ENSMUSG00000021621	Zcchc9	100	51.625	ENSPNYG00000011001	zcchc9	100	51.613	Pundamilia_nyererei
ENSMUSG00000021621	Zcchc9	99	48.201	ENSPNAG00000008675	zcchc9	88	48.201	Pygocentrus_nattereri
ENSMUSG00000021621	Zcchc9	100	92.620	ENSRNOG00000051682	Zcchc9	100	92.620	Rattus_norvegicus
ENSMUSG00000021621	Zcchc9	100	74.170	ENSRBIG00000036904	-	99	74.170	Rhinopithecus_bieti
ENSMUSG00000021621	Zcchc9	100	81.181	ENSRBIG00000040955	-	100	80.812	Rhinopithecus_bieti
ENSMUSG00000021621	Zcchc9	100	82.288	ENSRROG00000042005	-	100	81.919	Rhinopithecus_roxellana
ENSMUSG00000021621	Zcchc9	100	81.319	ENSRROG00000029012	-	100	80.952	Rhinopithecus_roxellana
ENSMUSG00000021621	Zcchc9	86	75.966	ENSRROG00000045436	-	100	75.966	Rhinopithecus_roxellana
ENSMUSG00000021621	Zcchc9	100	81.618	ENSSBOG00000034293	-	100	82.353	Saimiri_boliviensis_boliviensis
ENSMUSG00000021621	Zcchc9	100	70.438	ENSSHAG00000014504	ZCCHC9	100	69.708	Sarcophilus_harrisii
ENSMUSG00000021621	Zcchc9	100	51.908	ENSSFOG00015011594	zcchc9	100	50.538	Scleropages_formosus
ENSMUSG00000021621	Zcchc9	100	54.545	ENSSMAG00000009572	zcchc9	100	54.545	Scophthalmus_maximus
ENSMUSG00000021621	Zcchc9	100	54.212	ENSSDUG00000006368	zcchc9	100	54.945	Seriola_dumerili
ENSMUSG00000021621	Zcchc9	100	54.310	ENSSLDG00000022676	zcchc9	100	52.015	Seriola_lalandi_dorsalis
ENSMUSG00000021621	Zcchc9	100	80.443	ENSSARG00000008580	ZCCHC9	100	80.443	Sorex_araneus
ENSMUSG00000021621	Zcchc9	100	62.037	ENSSPUG00000004588	ZCCHC9	99	60.000	Sphenodon_punctatus
ENSMUSG00000021621	Zcchc9	100	53.285	ENSSPAG00000022883	zcchc9	100	52.920	Stegastes_partitus
ENSMUSG00000021621	Zcchc9	100	81.550	ENSSSCG00000014129	ZCCHC9	100	81.550	Sus_scrofa
ENSMUSG00000021621	Zcchc9	100	57.895	ENSTGUG00000006994	ZCCHC9	100	71.098	Taeniopygia_guttata
ENSMUSG00000021621	Zcchc9	100	52.174	ENSTRUG00000018600	zcchc9	100	52.174	Takifugu_rubripes
ENSMUSG00000021621	Zcchc9	100	54.710	ENSTNIG00000013571	zcchc9	100	54.710	Tetraodon_nigroviridis
ENSMUSG00000021621	Zcchc9	100	81.550	ENSTTRG00000013796	ZCCHC9	100	81.550	Tursiops_truncatus
ENSMUSG00000021621	Zcchc9	100	82.657	ENSUAMG00000021778	ZCCHC9	100	82.657	Ursus_americanus
ENSMUSG00000021621	Zcchc9	100	82.657	ENSUMAG00000003264	ZCCHC9	100	82.657	Ursus_maritimus
ENSMUSG00000021621	Zcchc9	100	80.443	ENSVPAG00000009423	ZCCHC9	100	80.443	Vicugna_pacos
ENSMUSG00000021621	Zcchc9	100	82.288	ENSVVUG00000023331	ZCCHC9	100	82.288	Vulpes_vulpes
ENSMUSG00000021621	Zcchc9	100	62.308	ENSXETG00000027804	zcchc9	100	52.364	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	IEA	Component
GO:0008270	zinc ion binding	-	IEA	Function
GO:0010923	negative regulation of phosphatase activity	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function