EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021660 (Gene tree)
Gene ID: 218490
Gene Symbol: Btf3
Alias: 1700054E11Rik
Full Name: basic transcription factor 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 7111
Position: chr13: 98309896-98317006
Accession: 1202875
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000152704	-	888	-	ENSMUSP00000118093	162 (aa)	-	Q64152
ENSMUST00000133461	-	839	-	-	- (aa)	-	-
ENSMUST00000134542	-	780	-	ENSMUSP00000115500	162 (aa)	-	Q64152
ENSMUST00000022163	-	1091	-	ENSMUSP00000022163	204 (aa)	-	Q64152
ENSMUST00000133826	-	569	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000021660's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021660's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000021660	Btf3	94	65.806	WBGene00002045	icd-1	92	65.806	Caenorhabditis_elegans

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001701	in utero embryonic development	7655515.	IMP	Process
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0015031	protein transport	-	IEA	Process