EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021731 (Gene tree)
Gene ID: 59054
Gene Symbol: Mrps30
Alias: 2610020A16Rik|Pdcd9
Full Name: mitochondrial ribosomal protein S30
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 8872 bases
Position: chr13:118378381-118387252
Accession: 1926237
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000022245	PDCD9	PF07147.12	1.4e-175	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000022245	-	3319	-	ENSMUSP00000022245	442 (aa)	-	Q9D0G0
ENSMUST00000225170	-	3803	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000021731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021731's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000021731	Mrps30	98	73.576	ENSG00000112996	MRPS30	99	72.998	Homo_sapiens
ENSMUSG00000021731	Mrps30	89	50.957	ENSAPOG00000005833	mrps30	85	49.761	Acanthochromis_polyacanthus
ENSMUSG00000021731	Mrps30	98	73.272	ENSAMEG00000000569	MRPS30	99	73.148	Ailuropoda_melanoleuca
ENSMUSG00000021731	Mrps30	86	51.938	ENSACIG00000024177	mrps30	92	51.163	Amphilophus_citrinellus
ENSMUSG00000021731	Mrps30	89	51.196	ENSAOCG00000018917	mrps30	97	50.000	Amphiprion_ocellaris
ENSMUSG00000021731	Mrps30	89	50.239	ENSAPEG00000012822	mrps30	89	49.761	Amphiprion_percula
ENSMUSG00000021731	Mrps30	88	49.140	ENSATEG00000001216	mrps30	94	48.403	Anabas_testudineus
ENSMUSG00000021731	Mrps30	96	61.502	ENSACAG00000011165	MRPS30	96	61.502	Anolis_carolinensis
ENSMUSG00000021731	Mrps30	98	73.903	ENSANAG00000036508	MRPS30	99	74.478	Aotus_nancymaae
ENSMUSG00000021731	Mrps30	86	52.577	ENSACLG00000020138	mrps30	92	51.546	Astatotilapia_calliptera
ENSMUSG00000021731	Mrps30	86	53.093	ENSAMXG00000016126	mrps30	90	52.538	Astyanax_mexicanus
ENSMUSG00000021731	Mrps30	98	74.771	ENSBTAG00000000084	MRPS30	100	74.483	Bos_taurus
ENSMUSG00000021731	Mrps30	98	74.134	ENSCJAG00000040653	MRPS30	99	74.710	Callithrix_jacchus
ENSMUSG00000021731	Mrps30	96	75.587	ENSCAFG00000018516	MRPS30	99	75.352	Canis_familiaris
ENSMUSG00000021731	Mrps30	96	75.176	ENSCAFG00020023088	MRPS30	99	75.176	Canis_lupus_dingo
ENSMUSG00000021731	Mrps30	98	74.943	ENSCHIG00000018591	MRPS30	100	74.483	Capra_hircus
ENSMUSG00000021731	Mrps30	98	75.115	ENSTSYG00000009384	MRPS30	99	75.000	Carlito_syrichta
ENSMUSG00000021731	Mrps30	98	72.979	ENSCPOG00000002067	MRPS30	100	72.517	Cavia_porcellus
ENSMUSG00000021731	Mrps30	98	72.082	ENSCCAG00000019340	MRPS30	99	72.874	Cebus_capucinus
ENSMUSG00000021731	Mrps30	98	74.483	ENSCATG00000044059	MRPS30	99	74.365	Cercocebus_atys
ENSMUSG00000021731	Mrps30	98	68.591	ENSCLAG00000007412	MRPS30	99	68.677	Chinchilla_lanigera
ENSMUSG00000021731	Mrps30	98	74.023	ENSCSAG00000016737	MRPS30	99	73.903	Chlorocebus_sabaeus
ENSMUSG00000021731	Mrps30	98	60.970	ENSCHOG00000005579	MRPS30	99	61.021	Choloepus_hoffmanni
ENSMUSG00000021731	Mrps30	96	59.294	ENSCPBG00000007637	MRPS30	99	60.235	Chrysemys_picta_bellii
ENSMUSG00000021731	Mrps30	65	31.098	ENSCSAVG00000002974	-	78	31.098	Ciona_savignyi
ENSMUSG00000021731	Mrps30	98	73.903	ENSCANG00000034816	MRPS30	99	74.246	Colobus_angolensis_palliatus
ENSMUSG00000021731	Mrps30	100	84.163	ENSCGRG00001003133	Mrps30	100	83.710	Cricetulus_griseus_chok1gshd
ENSMUSG00000021731	Mrps30	83	84.110	ENSCGRG00000012001	Mrps30	97	81.152	Cricetulus_griseus_crigri
ENSMUSG00000021731	Mrps30	88	48.655	ENSCSEG00000018816	mrps30	95	48.166	Cynoglossus_semilaevis
ENSMUSG00000021731	Mrps30	86	51.421	ENSCVAG00000015707	mrps30	91	50.649	Cyprinodon_variegatus
ENSMUSG00000021731	Mrps30	89	52.500	ENSDARG00000104111	mrps30	95	52.750	Danio_rerio
ENSMUSG00000021731	Mrps30	98	74.246	ENSDNOG00000006691	MRPS30	99	74.246	Dasypus_novemcinctus
ENSMUSG00000021731	Mrps30	99	75.955	ENSDORG00000014828	Mrps30	99	75.955	Dipodomys_ordii
ENSMUSG00000021731	Mrps30	98	72.854	ENSETEG00000006266	MRPS30	99	72.854	Echinops_telfairi
ENSMUSG00000021731	Mrps30	95	47.897	ENSEBUG00000016559	mrps30	89	50.518	Eptatretus_burgeri
ENSMUSG00000021731	Mrps30	98	74.596	ENSEASG00005013467	MRPS30	99	74.942	Equus_asinus_asinus
ENSMUSG00000021731	Mrps30	98	72.414	ENSECAG00000009350	MRPS30	99	74.365	Equus_caballus
ENSMUSG00000021731	Mrps30	81	80.000	ENSEEUG00000013893	MRPS30	100	75.875	Erinaceus_europaeus
ENSMUSG00000021731	Mrps30	87	52.882	ENSELUG00000014642	mrps30	93	51.629	Esox_lucius
ENSMUSG00000021731	Mrps30	98	75.342	ENSFCAG00000028632	MRPS30	99	75.000	Felis_catus
ENSMUSG00000021731	Mrps30	86	52.914	ENSFALG00000011219	MRPS30	80	62.162	Ficedula_albicollis
ENSMUSG00000021731	Mrps30	98	76.674	ENSFDAG00000019454	MRPS30	99	76.334	Fukomys_damarensis
ENSMUSG00000021731	Mrps30	86	52.455	ENSFHEG00000004052	mrps30	91	52.196	Fundulus_heteroclitus
ENSMUSG00000021731	Mrps30	86	49.745	ENSGMOG00000012960	mrps30	92	48.724	Gadus_morhua
ENSMUSG00000021731	Mrps30	93	59.322	ENSGALG00000014874	MRPS30	86	59.184	Gallus_gallus
ENSMUSG00000021731	Mrps30	89	51.456	ENSGAFG00000016889	mrps30	96	51.214	Gambusia_affinis
ENSMUSG00000021731	Mrps30	86	48.507	ENSGACG00000013789	mrps30	91	48.628	Gasterosteus_aculeatus
ENSMUSG00000021731	Mrps30	86	62.797	ENSGAGG00000014136	MRPS30	93	62.694	Gopherus_agassizii
ENSMUSG00000021731	Mrps30	98	74.142	ENSGGOG00000016095	MRPS30	99	73.563	Gorilla_gorilla
ENSMUSG00000021731	Mrps30	86	52.320	ENSHBUG00000000852	mrps30	92	51.289	Haplochromis_burtoni
ENSMUSG00000021731	Mrps30	98	76.566	ENSHGLG00000007915	MRPS30	99	75.870	Heterocephalus_glaber_female
ENSMUSG00000021731	Mrps30	98	76.334	ENSHGLG00100015140	MRPS30	99	75.638	Heterocephalus_glaber_male
ENSMUSG00000021731	Mrps30	89	48.792	ENSHCOG00000008085	mrps30	93	48.309	Hippocampus_comes
ENSMUSG00000021731	Mrps30	88	52.821	ENSIPUG00000015530	mrps30	91	52.821	Ictalurus_punctatus
ENSMUSG00000021731	Mrps30	98	76.334	ENSSTOG00000015844	MRPS30	99	76.334	Ictidomys_tridecemlineatus
ENSMUSG00000021731	Mrps30	96	64.789	ENSJJAG00000007272	Mrps30	97	64.789	Jaculus_jaculus
ENSMUSG00000021731	Mrps30	89	53.218	ENSKMAG00000007615	mrps30	96	51.613	Kryptolebias_marmoratus
ENSMUSG00000021731	Mrps30	89	51.196	ENSLBEG00000026237	mrps30	97	50.718	Labrus_bergylta
ENSMUSG00000021731	Mrps30	90	49.296	ENSLACG00000000083	MRPS30	93	48.905	Latimeria_chalumnae
ENSMUSG00000021731	Mrps30	86	56.186	ENSLOCG00000011976	mrps30	91	55.928	Lepisosteus_oculatus
ENSMUSG00000021731	Mrps30	98	72.414	ENSLAFG00000005809	MRPS30	100	71.724	Loxodonta_africana
ENSMUSG00000021731	Mrps30	98	74.483	ENSMFAG00000037068	MRPS30	99	74.365	Macaca_fascicularis
ENSMUSG00000021731	Mrps30	98	74.253	ENSMMUG00000016180	MRPS30	99	74.134	Macaca_mulatta
ENSMUSG00000021731	Mrps30	98	74.253	ENSMNEG00000040760	MRPS30	99	74.134	Macaca_nemestrina
ENSMUSG00000021731	Mrps30	98	74.253	ENSMLEG00000029243	MRPS30	99	74.134	Mandrillus_leucophaeus
ENSMUSG00000021731	Mrps30	91	50.608	ENSMAMG00000006544	mrps30	96	50.617	Mastacembelus_armatus
ENSMUSG00000021731	Mrps30	86	52.577	ENSMZEG00005013678	mrps30	92	51.546	Maylandia_zebra
ENSMUSG00000021731	Mrps30	100	81.038	ENSMAUG00000013462	Mrps30	100	80.587	Mesocricetus_auratus
ENSMUSG00000021731	Mrps30	98	75.058	ENSMICG00000008017	MRPS30	99	75.406	Microcebus_murinus
ENSMUSG00000021731	Mrps30	99	84.127	ENSMOCG00000019175	Mrps30	99	84.127	Microtus_ochrogaster
ENSMUSG00000021731	Mrps30	86	51.515	ENSMMOG00000017960	mrps30	92	50.000	Mola_mola
ENSMUSG00000021731	Mrps30	98	63.510	ENSMODG00000020268	MRPS30	100	64.203	Monodelphis_domestica
ENSMUSG00000021731	Mrps30	86	51.128	ENSMALG00000005101	mrps30	92	50.627	Monopterus_albus
ENSMUSG00000021731	Mrps30	100	96.606	MGP_CAROLIEiJ_G0018921	Mrps30	100	96.606	Mus_caroli
ENSMUSG00000021731	Mrps30	100	93.213	MGP_PahariEiJ_G0015991	Mrps30	100	93.213	Mus_pahari
ENSMUSG00000021731	Mrps30	100	97.523	MGP_SPRETEiJ_G0019800	Mrps30	100	97.523	Mus_spretus
ENSMUSG00000021731	Mrps30	96	73.302	ENSMPUG00000014405	MRPS30	99	75.644	Mustela_putorius_furo
ENSMUSG00000021731	Mrps30	98	71.910	ENSMLUG00000006240	MRPS30	99	71.910	Myotis_lucifugus
ENSMUSG00000021731	Mrps30	99	77.727	ENSNGAG00000016518	Mrps30	100	77.727	Nannospalax_galili
ENSMUSG00000021731	Mrps30	86	52.320	ENSNBRG00000022896	mrps30	92	51.289	Neolamprologus_brichardi
ENSMUSG00000021731	Mrps30	98	72.540	ENSNLEG00000010605	MRPS30	99	72.414	Nomascus_leucogenys
ENSMUSG00000021731	Mrps30	64	53.684	ENSMEUG00000016135	-	64	52.128	Notamacropus_eugenii
ENSMUSG00000021731	Mrps30	98	63.109	ENSOPRG00000013365	-	99	63.109	Ochotona_princeps
ENSMUSG00000021731	Mrps30	86	51.804	ENSONIG00000016926	mrps30	92	50.773	Oreochromis_niloticus
ENSMUSG00000021731	Mrps30	54	71.130	ENSOANG00000001659	-	99	71.130	Ornithorhynchus_anatinus
ENSMUSG00000021731	Mrps30	88	74.680	ENSOCUG00000004207	MRPS30	95	74.425	Oryctolagus_cuniculus
ENSMUSG00000021731	Mrps30	89	50.122	ENSORLG00000001227	mrps30	96	49.392	Oryzias_latipes
ENSMUSG00000021731	Mrps30	89	50.608	ENSORLG00020009592	mrps30	96	49.878	Oryzias_latipes_hni
ENSMUSG00000021731	Mrps30	89	50.608	ENSORLG00015018671	mrps30	96	49.878	Oryzias_latipes_hsok
ENSMUSG00000021731	Mrps30	54	57.261	ENSORLG00015018948	mrps30	55	57.261	Oryzias_latipes_hsok
ENSMUSG00000021731	Mrps30	59	53.232	ENSORLG00015018978	mrps30	98	53.232	Oryzias_latipes_hsok
ENSMUSG00000021731	Mrps30	88	51.990	ENSOMEG00000012836	mrps30	94	51.244	Oryzias_melastigma
ENSMUSG00000021731	Mrps30	76	72.781	ENSOGAG00000001149	-	99	72.781	Otolemur_garnettii
ENSMUSG00000021731	Mrps30	98	72.644	ENSOARG00000008516	MRPS30	100	72.414	Ovis_aries
ENSMUSG00000021731	Mrps30	98	73.576	ENSPPAG00000030590	MRPS30	99	72.998	Pan_paniscus
ENSMUSG00000021731	Mrps30	98	76.389	ENSPPRG00000001754	MRPS30	99	76.389	Panthera_pardus
ENSMUSG00000021731	Mrps30	83	78.689	ENSPTIG00000016940	MRPS30	93	79.000	Panthera_tigris_altaica
ENSMUSG00000021731	Mrps30	98	73.576	ENSPTRG00000016854	MRPS30	99	72.998	Pan_troglodytes
ENSMUSG00000021731	Mrps30	98	74.253	ENSPANG00000004116	MRPS30	99	74.134	Papio_anubis
ENSMUSG00000021731	Mrps30	86	52.152	ENSPKIG00000024011	mrps30	91	51.646	Paramormyrops_kingsleyae
ENSMUSG00000021731	Mrps30	96	58.080	ENSPSIG00000004270	MRPS30	98	58.548	Pelodiscus_sinensis
ENSMUSG00000021731	Mrps30	88	51.724	ENSPMGG00000006586	mrps30	93	50.995	Periophthalmus_magnuspinnatus
ENSMUSG00000021731	Mrps30	56	89.837	ENSPEMG00000019509	Mrps30	99	89.837	Peromyscus_maniculatus_bairdii
ENSMUSG00000021731	Mrps30	86	54.663	ENSPMAG00000001635	mrps30	96	52.742	Petromyzon_marinus
ENSMUSG00000021731	Mrps30	88	68.718	ENSPCIG00000023080	-	99	64.583	Phascolarctos_cinereus
ENSMUSG00000021731	Mrps30	89	51.095	ENSPFOG00000007213	mrps30	96	50.122	Poecilia_formosa
ENSMUSG00000021731	Mrps30	89	51.095	ENSPLAG00000004649	mrps30	96	49.392	Poecilia_latipinna
ENSMUSG00000021731	Mrps30	89	51.095	ENSPMEG00000017497	mrps30	96	49.878	Poecilia_mexicana
ENSMUSG00000021731	Mrps30	89	51.699	ENSPREG00000008014	mrps30	96	50.485	Poecilia_reticulata
ENSMUSG00000021731	Mrps30	98	69.773	ENSPPYG00000015445	MRPS30	99	70.091	Pongo_abelii
ENSMUSG00000021731	Mrps30	96	74.648	ENSPCAG00000001587	MRPS30	98	74.178	Procavia_capensis
ENSMUSG00000021731	Mrps30	98	75.289	ENSPCOG00000018431	MRPS30	99	75.638	Propithecus_coquereli
ENSMUSG00000021731	Mrps30	98	75.058	ENSPVAG00000002302	MRPS30	99	75.406	Pteropus_vampyrus
ENSMUSG00000021731	Mrps30	86	52.062	ENSPNYG00000016992	mrps30	92	51.031	Pundamilia_nyererei
ENSMUSG00000021731	Mrps30	90	50.732	ENSPNAG00000029888	mrps30	81	51.908	Pygocentrus_nattereri
ENSMUSG00000021731	Mrps30	100	88.914	ENSRNOG00000012136	Mrps30	100	88.688	Rattus_norvegicus
ENSMUSG00000021731	Mrps30	55	65.306	ENSRBIG00000043339	MRPS30	100	65.306	Rhinopithecus_bieti
ENSMUSG00000021731	Mrps30	98	73.333	ENSRROG00000033687	MRPS30	99	73.441	Rhinopithecus_roxellana
ENSMUSG00000021731	Mrps30	98	73.394	ENSSBOG00000034220	MRPS30	99	73.272	Saimiri_boliviensis_boliviensis
ENSMUSG00000021731	Mrps30	98	64.434	ENSSHAG00000005755	MRPS30	99	64.203	Sarcophilus_harrisii
ENSMUSG00000021731	Mrps30	61	54.779	ENSSFOG00015001570	mrps30	99	54.779	Scleropages_formosus
ENSMUSG00000021731	Mrps30	89	48.946	ENSSMAG00000008392	mrps30	97	48.712	Scophthalmus_maximus
ENSMUSG00000021731	Mrps30	86	49.752	ENSSDUG00000022416	mrps30	90	49.257	Seriola_dumerili
ENSMUSG00000021731	Mrps30	89	49.043	ENSSLDG00000004595	mrps30	97	48.565	Seriola_lalandi_dorsalis
ENSMUSG00000021731	Mrps30	78	79.605	ENSSARG00000009420	MRPS30	80	79.605	Sorex_araneus
ENSMUSG00000021731	Mrps30	96	56.674	ENSSPUG00000014071	MRPS30	99	56.706	Sphenodon_punctatus
ENSMUSG00000021731	Mrps30	86	51.523	ENSSPAG00000013705	mrps30	86	51.269	Stegastes_partitus
ENSMUSG00000021731	Mrps30	90	75.439	ENSSSCG00000032275	MRPS30	99	75.439	Sus_scrofa
ENSMUSG00000021731	Mrps30	86	57.881	ENSTGUG00000002337	MRPS30	100	56.848	Taeniopygia_guttata
ENSMUSG00000021731	Mrps30	86	52.926	ENSTRUG00000025594	mrps30	92	52.163	Takifugu_rubripes
ENSMUSG00000021731	Mrps30	90	52.334	ENSTNIG00000015579	mrps30	96	51.861	Tetraodon_nigroviridis
ENSMUSG00000021731	Mrps30	98	76.267	ENSTBEG00000005825	MRPS30	100	76.267	Tupaia_belangeri
ENSMUSG00000021731	Mrps30	98	75.000	ENSTTRG00000008025	MRPS30	100	74.771	Tursiops_truncatus
ENSMUSG00000021731	Mrps30	98	67.898	ENSUAMG00000007035	MRPS30	99	67.898	Ursus_americanus
ENSMUSG00000021731	Mrps30	60	80.377	ENSUMAG00000005883	MRPS30	99	80.377	Ursus_maritimus
ENSMUSG00000021731	Mrps30	98	74.142	ENSVPAG00000007070	MRPS30	99	74.371	Vicugna_pacos
ENSMUSG00000021731	Mrps30	77	72.566	ENSVVUG00000025454	MRPS30	100	72.485	Vulpes_vulpes
ENSMUSG00000021731	Mrps30	86	51.554	ENSXETG00000017716	mrps30	92	50.518	Xenopus_tropicalis
ENSMUSG00000021731	Mrps30	89	50.971	ENSXCOG00000009616	mrps30	96	50.728	Xiphophorus_couchianus
ENSMUSG00000021731	Mrps30	90	50.721	ENSXMAG00000003123	mrps30	96	50.728	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0008150	biological_process	-	ND	Process