EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000163955	-	432	-	ENSMUSP00000130934	144 (aa)	-	F7CFA5
ENSMUST00000162912	-	834	-	-	- (aa)	-	-
ENSMUST00000022322	-	3390	-	ENSMUSP00000022322	558 (aa)	-	P26443
ENSMUST00000161593	-	655	-	-	- (aa)	-	-
ENSMUST00000159784	-	699	-	-	- (aa)	-	-

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu00220	Arginine biosynthesis	KEGG
mmu00250	Alanine, aspartate and glutamate metabolism	KEGG
mmu00471	D-Glutamine and D-glutamate metabolism	KEGG
mmu00910	Nitrogen metabolism	KEGG
mmu01100	Metabolic pathways	KEGG
mmu01200	Carbon metabolism	KEGG
mmu04217	Necroptosis	KEGG
mmu04964	Proximal tubule bicarbonate reclamation	KEGG

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0004352	glutamate dehydrogenase (NAD+) activity	-	ISO	Function
GO:0004353	glutamate dehydrogenase [NAD(P)+] activity	11792727.16959573.23663782.26767982.	IDA	Function
GO:0004353	glutamate dehydrogenase [NAD(P)+] activity	-	ISO	Function
GO:0005515	protein binding	16959573.19498109.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005525	GTP binding	-	ISO	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	16959573.26767982.	IDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005743	mitochondrial inner membrane	12865426.	HDA	Component
GO:0005759	mitochondrial matrix	17923681.	IDA	Component
GO:0006520	cellular amino acid metabolic process	-	IEA	Process
GO:0006537	glutamate biosynthetic process	-	ISO	Process
GO:0006538	glutamate catabolic process	-	ISO	Process
GO:0006541	glutamine metabolic process	23663782.	IMP	Process
GO:0010044	response to aluminum ion	-	ISO	Process
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016639	oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	-	IEA	Function
GO:0019899	enzyme binding	-	ISO	Function
GO:0032024	positive regulation of insulin secretion	16959573.	IGI	Process
GO:0032024	positive regulation of insulin secretion	-	ISO	Process
GO:0043531	ADP binding	-	ISO	Function
GO:0055114	oxidation-reduction process	-	IEA	Process
GO:0070403	NAD+ binding	-	ISO	Function
GO:0070728	leucine binding	-	ISO	Function
GO:0072350	tricarboxylic acid metabolic process	23663782.	IMP	Process