EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021798 (Gene tree)
Gene ID: 24131
Gene Symbol: Ldb3
Alias: ZASP|cypher
Full Name: LIM domain binding 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 62080
Position: chr14: 34526603-34588682
Accession: 1344412
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000022327	-	5119	XM_017316019	ENSMUSP00000022327	723 (aa)	XP_017171508	Q9JKS4
ENSMUST00000228044	-	1883	-	ENSMUSP00000154758	622 (aa)	-	Q9JKS4
ENSMUST00000022330	-	1586	-	ENSMUSP00000022330	327 (aa)	-	Q9JKS4
ENSMUST00000022328	-	2468	-	ENSMUSP00000022328	661 (aa)	-	Q9JKS4
ENSMUST00000064098	-	2299	XM_006519018	ENSMUSP00000066784	679 (aa)	XP_006519081	E9PYJ9
ENSMUST00000226226	-	17	-	-	- (aa)	-	-
ENSMUST00000227819	-	1499	XM_006519019	ENSMUSP00000154119	288 (aa)	XP_006519082	Q9JKS4
ENSMUST00000090040	-	4981	XM_006519017	ENSMUSP00000087494	684 (aa)	XP_006519080	Q9JKS4

Gene Model

Click here to download ENSMUSG00000021798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021798's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005080	protein kinase C binding	10391924.	IDA	Function
GO:0005515	protein binding	10391924.11842093.	IPI	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005856	cytoskeleton	-	ISO	Component
GO:0008092	cytoskeletal protein binding	-	ISO	Function
GO:0030018	Z disc	16481394.19047374.	IDA	Component
GO:0030018	Z disc	10427098.	ISO	Component
GO:0042995	cell projection	-	IEA	Component
GO:0045214	sarcomere organization	11696561.	IMP	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051371	muscle alpha-actinin binding	11696561.	IDA	Function
GO:0051371	muscle alpha-actinin binding	10391924.	IPI	Function