EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021811 (Gene tree)
Gene ID: 108671
Gene Symbol: Dnajc9
Alias: 5330419I01Rik
Full Name: DnaJ heat shock protein family (Hsp40) member C9
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 4273
Position: chr14: 20384638-20388910
Accession: 1915326
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000223950	-	1164	-	-	- (aa)	-	-
ENSMUST00000022345	-	1631	-	ENSMUSP00000022345	259 (aa)	-	Q91WN1
ENSMUST00000223844	-	713	-	-	- (aa)	-	-
ENSMUST00000223889	-	781	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000021811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021811's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000021811	Dnajc9	93	38.095	FBgn0037878	CG6693	84	38.095	Drosophila_melanogaster
ENSMUSG00000021811	Dnajc9	94	88.477	ENSG00000213551	DNAJC9	100	87.692	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005615	extracellular space	-	ISO	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0016020	membrane	-	IEA	Component
GO:0031072	heat shock protein binding	21873635.	IBA	Function
GO:0031072	heat shock protein binding	-	ISO	Function
GO:0032781	positive regulation of ATPase activity	-	ISO	Process