EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021838 (Gene tree)
Gene ID: 74480
Gene Symbol: Samd4
Alias: 1700024G08Rik|1700111L17Rik|4933436G17Rik|Smaug|sunk
Full Name: sterile alpha motif domain containing 4
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 222962
Position: chr14: 46882854-47105815
Accession: 1921730
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000227848	-	505	-	ENSMUSP00000154727	114 (aa)	-	A0A2I3BRV2
ENSMUST00000141767	-	385	-	-	- (aa)	-	-
ENSMUST00000125688	-	1773	XM_006519631	ENSMUSP00000115569	302 (aa)	XP_006519694	Q8CBY1
ENSMUST00000137543	-	6874	-	ENSMUSP00000114621	623 (aa)	-	Q8CBY1
ENSMUST00000226684	-	383	-	-	- (aa)	-	-
ENSMUST00000100672	-	4165	-	ENSMUSP00000098237	623 (aa)	-	Q8CBY1
ENSMUST00000022386	-	4564	XM_006519627	ENSMUSP00000022386	711 (aa)	XP_006519690	Q8CBY1
ENSMUST00000228404	-	3039	-	ENSMUSP00000153846	522 (aa)	-	A0A2I3BPM7
ENSMUST00000125113	-	2442	XM_006519628	ENSMUSP00000122833	610 (aa)	XP_006519691	Q8CBY1
ENSMUST00000130046	-	527	-	-	- (aa)	-	-
ENSMUST00000140571	-	552	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000021838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021838's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000289	nuclear-transcribed mRNA poly(A) tail shortening	21873635.	IBA	Process
GO:0000932	P-body	21873635.	IBA	Component
GO:0001650	fibrillar center	-	ISO	Component
GO:0003723	RNA binding	-	IEA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006417	regulation of translation	-	IEA	Process
GO:0017148	negative regulation of translation	21873635.	IBA	Process
GO:0030054	cell junction	-	ISO	Component
GO:0030371	translation repressor activity	21873635.	IBA	Function
GO:0030371	translation repressor activity	-	ISO	Function
GO:0042995	cell projection	-	IEA	Component
GO:0043005	neuron projection	-	IEA	Component
GO:0043488	regulation of mRNA stability	21873635.	IBA	Process
GO:0045202	synapse	16221671.	IDA	Component
GO:0045727	positive regulation of translation	-	ISO	Process