EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000021958 (Gene tree)
Gene ID: 72400
Gene Symbol: Pinx1
Alias: 2210403I16Rik|2610028A01Rik|LPTS
Full Name: PIN2/TERF1 interacting%2C telomerase inhibitor 1
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 59496 bases
Position: chr14:63860364-63919859
Accession: 1919650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000022528	G-patch	PF01585.23	2.3e-15	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000022528	-	1295	XM_006519595	ENSMUSP00000022528	332 (aa)	XP_006519658	Q9CZX5
ENSMUST00000225644	-	488	-	-	- (aa)	-	-
ENSMUST00000225564	-	1210	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000021958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000021958's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000021958	Pinx1	97	71.692	ENSG00000254093	PINX1	98	93.893	Homo_sapiens
ENSMUSG00000021958	Pinx1	61	54.976	ENSAPOG00000019162	pinx1	54	55.825	Acanthochromis_polyacanthus
ENSMUSG00000021958	Pinx1	63	65.403	ENSACIG00000002565	pinx1	99	65.403	Amphilophus_citrinellus
ENSMUSG00000021958	Pinx1	62	62.736	ENSAPEG00000008823	pinx1	95	64.390	Amphiprion_percula
ENSMUSG00000021958	Pinx1	57	66.667	ENSATEG00000005291	pinx1	51	67.662	Anabas_testudineus
ENSMUSG00000021958	Pinx1	59	68.966	ENSACAG00000028950	PINX1	59	68.966	Anolis_carolinensis
ENSMUSG00000021958	Pinx1	97	64.110	ENSANAG00000029168	-	97	63.497	Aotus_nancymaae
ENSMUSG00000021958	Pinx1	64	64.732	ENSACLG00000011764	pinx1	58	64.732	Astatotilapia_calliptera
ENSMUSG00000021958	Pinx1	64	60.504	ENSAMXG00000019248	pinx1	53	64.815	Astyanax_mexicanus
ENSMUSG00000021958	Pinx1	98	68.502	ENSBTAG00000000500	PINX1	98	67.802	Bos_taurus
ENSMUSG00000021958	Pinx1	98	69.939	ENSCJAG00000047277	PINX1	84	87.671	Callithrix_jacchus
ENSMUSG00000021958	Pinx1	97	67.492	ENSCAFG00000008087	PINX1	98	66.975	Canis_familiaris
ENSMUSG00000021958	Pinx1	92	67.541	ENSCAFG00020012022	PINX1	96	67.320	Canis_lupus_dingo
ENSMUSG00000021958	Pinx1	97	68.308	ENSCHIG00000026485	PINX1	97	67.077	Capra_hircus
ENSMUSG00000021958	Pinx1	95	57.862	ENSCAPG00000017262	PINX1	95	59.119	Cavia_aperea
ENSMUSG00000021958	Pinx1	97	66.769	ENSCPOG00000038127	PINX1	96	68.000	Cavia_porcellus
ENSMUSG00000021958	Pinx1	80	69.697	ENSCCAG00000035196	-	72	78.049	Cebus_capucinus
ENSMUSG00000021958	Pinx1	97	69.659	ENSCCAG00000031868	-	76	93.233	Cebus_capucinus
ENSMUSG00000021958	Pinx1	97	68.615	ENSCCAG00000025092	-	96	68.308	Cebus_capucinus
ENSMUSG00000021958	Pinx1	97	71.517	ENSCATG00000043703	PINX1	96	70.898	Cercocebus_atys
ENSMUSG00000021958	Pinx1	95	70.476	ENSCLAG00000015490	PINX1	97	68.827	Chinchilla_lanigera
ENSMUSG00000021958	Pinx1	97	72.615	ENSCSAG00000016897	PINX1	97	71.779	Chlorocebus_sabaeus
ENSMUSG00000021958	Pinx1	94	61.635	ENSCSAG00000015668	-	95	59.813	Chlorocebus_sabaeus
ENSMUSG00000021958	Pinx1	97	51.543	ENSCHOG00000006874	PINX1	97	51.543	Choloepus_hoffmanni
ENSMUSG00000021958	Pinx1	57	66.837	ENSCPBG00000020140	PINX1	54	66.837	Chrysemys_picta_bellii
ENSMUSG00000021958	Pinx1	58	46.907	ENSCING00000019756	-	70	46.114	Ciona_intestinalis
ENSMUSG00000021958	Pinx1	97	72.000	ENSCANG00000042110	PINX1	96	71.472	Colobus_angolensis_palliatus
ENSMUSG00000021958	Pinx1	97	84.211	ENSCGRG00001022710	Pinx1	98	84.520	Cricetulus_griseus_chok1gshd
ENSMUSG00000021958	Pinx1	97	84.211	ENSCGRG00000013834	Pinx1	98	84.520	Cricetulus_griseus_crigri
ENSMUSG00000021958	Pinx1	57	62.687	ENSCVAG00000023335	pinx1	52	62.687	Cyprinodon_variegatus
ENSMUSG00000021958	Pinx1	64	64.889	ENSDARG00000023532	pinx1	63	64.602	Danio_rerio
ENSMUSG00000021958	Pinx1	96	76.176	ENSDORG00000004065	Pinx1	95	76.176	Dipodomys_ordii
ENSMUSG00000021958	Pinx1	97	69.040	ENSEASG00005016402	PINX1	96	68.111	Equus_asinus_asinus
ENSMUSG00000021958	Pinx1	97	68.731	ENSECAG00000013778	PINX1	96	67.802	Equus_caballus
ENSMUSG00000021958	Pinx1	63	64.286	ENSELUG00000005680	pinx1	72	77.600	Esox_lucius
ENSMUSG00000021958	Pinx1	97	71.207	ENSFCAG00000004537	PINX1	97	70.898	Felis_catus
ENSMUSG00000021958	Pinx1	64	65.487	ENSFALG00000010926	PINX1	71	61.111	Ficedula_albicollis
ENSMUSG00000021958	Pinx1	97	69.255	ENSFDAG00000021284	PINX1	96	68.634	Fukomys_damarensis
ENSMUSG00000021958	Pinx1	59	65.385	ENSFHEG00000019078	pinx1	55	65.385	Fundulus_heteroclitus
ENSMUSG00000021958	Pinx1	63	63.134	ENSGMOG00000010002	pinx1	65	62.673	Gadus_morhua
ENSMUSG00000021958	Pinx1	59	66.010	ENSGALG00000041139	PINX1	57	66.010	Gallus_gallus
ENSMUSG00000021958	Pinx1	72	58.566	ENSGAFG00000003523	pinx1	58	64.593	Gambusia_affinis
ENSMUSG00000021958	Pinx1	64	61.364	ENSGACG00000010809	pinx1	64	61.364	Gasterosteus_aculeatus
ENSMUSG00000021958	Pinx1	97	72.308	ENSGGOG00000008531	PINX1	96	70.769	Gorilla_gorilla
ENSMUSG00000021958	Pinx1	92	67.974	ENSHGLG00000008063	PINX1	97	65.741	Heterocephalus_glaber_female
ENSMUSG00000021958	Pinx1	92	67.974	ENSHGLG00100015337	PINX1	97	65.741	Heterocephalus_glaber_male
ENSMUSG00000021958	Pinx1	59	61.972	ENSHCOG00000007428	pinx1	95	50.968	Hippocampus_comes
ENSMUSG00000021958	Pinx1	70	59.350	ENSIPUG00000016224	Pinx1	55	64.840	Ictalurus_punctatus
ENSMUSG00000021958	Pinx1	96	74.688	ENSSTOG00000010007	PINX1	90	74.375	Ictidomys_tridecemlineatus
ENSMUSG00000021958	Pinx1	97	76.235	ENSJJAG00000010795	Pinx1	96	75.926	Jaculus_jaculus
ENSMUSG00000021958	Pinx1	64	64.444	ENSKMAG00000012953	pinx1	61	64.444	Kryptolebias_marmoratus
ENSMUSG00000021958	Pinx1	59	65.550	ENSLBEG00000002014	pinx1	53	65.072	Labrus_bergylta
ENSMUSG00000021958	Pinx1	59	65.094	ENSLOCG00000016761	pinx1	60	66.981	Lepisosteus_oculatus
ENSMUSG00000021958	Pinx1	97	72.000	ENSMFAG00000030022	PINX1	97	71.472	Macaca_fascicularis
ENSMUSG00000021958	Pinx1	97	72.308	ENSMNEG00000034727	PINX1	97	71.779	Macaca_nemestrina
ENSMUSG00000021958	Pinx1	97	72.000	ENSMLEG00000041535	PINX1	97	71.472	Mandrillus_leucophaeus
ENSMUSG00000021958	Pinx1	64	65.611	ENSMAMG00000016984	pinx1	58	65.611	Mastacembelus_armatus
ENSMUSG00000021958	Pinx1	97	47.175	ENSMZEG00005016167	pinx1	57	64.055	Maylandia_zebra
ENSMUSG00000021958	Pinx1	100	84.639	ENSMAUG00000008214	Pinx1	100	84.639	Mesocricetus_auratus
ENSMUSG00000021958	Pinx1	97	67.791	ENSMICG00000044679	PINX1	95	67.485	Microcebus_murinus
ENSMUSG00000021958	Pinx1	94	86.174	ENSMOCG00000015963	Pinx1	98	85.231	Microtus_ochrogaster
ENSMUSG00000021958	Pinx1	62	70.531	ENSMODG00000008908	-	98	70.048	Monodelphis_domestica
ENSMUSG00000021958	Pinx1	59	68.780	ENSMALG00000003416	pinx1	60	80.000	Monopterus_albus
ENSMUSG00000021958	Pinx1	100	97.590	MGP_CAROLIEiJ_G0019409	Pinx1	100	97.590	Mus_caroli
ENSMUSG00000021958	Pinx1	100	96.084	MGP_PahariEiJ_G0030427	Pinx1	100	96.084	Mus_pahari
ENSMUSG00000021958	Pinx1	100	87.349	MGP_SPRETEiJ_G0020301	Pinx1	100	87.349	Mus_spretus
ENSMUSG00000021958	Pinx1	95	67.405	ENSMLUG00000003309	PINX1	95	67.089	Myotis_lucifugus
ENSMUSG00000021958	Pinx1	97	78.086	ENSNGAG00000023442	Pinx1	96	78.086	Nannospalax_galili
ENSMUSG00000021958	Pinx1	97	71.692	ENSNLEG00000027321	PINX1	98	71.385	Nomascus_leucogenys
ENSMUSG00000021958	Pinx1	95	66.981	ENSODEG00000010312	PINX1	96	65.723	Octodon_degus
ENSMUSG00000021958	Pinx1	59	67.788	ENSONIG00000015338	pinx1	56	67.788	Oreochromis_niloticus
ENSMUSG00000021958	Pinx1	98	71.951	ENSOCUG00000029598	PINX1	96	71.341	Oryctolagus_cuniculus
ENSMUSG00000021958	Pinx1	59	64.929	ENSORLG00000027082	pinx1	59	66.346	Oryzias_latipes
ENSMUSG00000021958	Pinx1	59	65.403	ENSORLG00020004528	pinx1	59	66.827	Oryzias_latipes_hni
ENSMUSG00000021958	Pinx1	59	65.403	ENSORLG00015023021	pinx1	59	66.827	Oryzias_latipes_hsok
ENSMUSG00000021958	Pinx1	66	63.675	ENSOMEG00000015931	pinx1	57	68.269	Oryzias_melastigma
ENSMUSG00000021958	Pinx1	97	65.015	ENSOGAG00000001021	-	97	65.741	Otolemur_garnettii
ENSMUSG00000021958	Pinx1	96	57.500	ENSOGAG00000030473	-	66	70.936	Otolemur_garnettii
ENSMUSG00000021958	Pinx1	95	67.405	ENSOARG00000015141	PINX1	95	66.456	Ovis_aries
ENSMUSG00000021958	Pinx1	97	72.308	ENSPPAG00000030738	PINX1	96	70.769	Pan_paniscus
ENSMUSG00000021958	Pinx1	97	71.207	ENSPPRG00000011818	PINX1	97	70.898	Panthera_pardus
ENSMUSG00000021958	Pinx1	97	71.517	ENSPTIG00000004845	PINX1	97	71.207	Panthera_tigris_altaica
ENSMUSG00000021958	Pinx1	97	72.615	ENSPTRG00000019980	PINX1	96	71.077	Pan_troglodytes
ENSMUSG00000021958	Pinx1	88	74.150	ENSPANG00000011251	PINX1	95	71.875	Papio_anubis
ENSMUSG00000021958	Pinx1	59	64.904	ENSPKIG00000004453	pinx1	55	65.865	Paramormyrops_kingsleyae
ENSMUSG00000021958	Pinx1	63	64.706	ENSPMGG00000018147	pinx1	83	64.253	Periophthalmus_magnuspinnatus
ENSMUSG00000021958	Pinx1	97	85.358	ENSPEMG00000022225	Pinx1	97	85.358	Peromyscus_maniculatus_bairdii
ENSMUSG00000021958	Pinx1	61	73.632	ENSPCIG00000004800	PINX1	71	69.264	Phascolarctos_cinereus
ENSMUSG00000021958	Pinx1	61	64.651	ENSPFOG00000009972	pinx1	59	65.581	Poecilia_formosa
ENSMUSG00000021958	Pinx1	61	64.651	ENSPLAG00000015081	pinx1	58	65.581	Poecilia_latipinna
ENSMUSG00000021958	Pinx1	59	64.115	ENSPMEG00000020309	pinx1	57	65.072	Poecilia_mexicana
ENSMUSG00000021958	Pinx1	57	63.861	ENSPREG00000019021	pinx1	56	62.100	Poecilia_reticulata
ENSMUSG00000021958	Pinx1	97	58.769	ENSPPYG00000016935	-	97	57.276	Pongo_abelii
ENSMUSG00000021958	Pinx1	97	72.308	ENSPPYG00000018361	PINX1	97	70.769	Pongo_abelii
ENSMUSG00000021958	Pinx1	84	60.854	ENSPCAG00000002496	PINX1	84	60.854	Procavia_capensis
ENSMUSG00000021958	Pinx1	97	61.059	ENSPVAG00000010440	PINX1	96	61.059	Pteropus_vampyrus
ENSMUSG00000021958	Pinx1	59	66.829	ENSPNAG00000005570	pinx1	57	63.801	Pygocentrus_nattereri
ENSMUSG00000021958	Pinx1	100	90.964	ENSRNOG00000012012	Pinx1	98	91.022	Rattus_norvegicus
ENSMUSG00000021958	Pinx1	97	72.308	ENSRBIG00000041410	PINX1	97	71.472	Rhinopithecus_bieti
ENSMUSG00000021958	Pinx1	97	72.308	ENSRROG00000044493	PINX1	98	71.166	Rhinopithecus_roxellana
ENSMUSG00000021958	Pinx1	97	67.791	ENSSBOG00000026142	PINX1	97	66.871	Saimiri_boliviensis_boliviensis
ENSMUSG00000021958	Pinx1	60	66.667	ENSSFOG00015009356	pinx1	53	65.094	Scleropages_formosus
ENSMUSG00000021958	Pinx1	59	68.269	ENSSMAG00000011442	pinx1	90	48.611	Scophthalmus_maximus
ENSMUSG00000021958	Pinx1	59	67.464	ENSSDUG00000013586	pinx1	53	66.986	Seriola_dumerili
ENSMUSG00000021958	Pinx1	56	70.000	ENSSPUG00000002809	PINX1	87	68.783	Sphenodon_punctatus
ENSMUSG00000021958	Pinx1	61	63.348	ENSSPAG00000018262	pinx1	61	65.158	Stegastes_partitus
ENSMUSG00000021958	Pinx1	88	70.890	ENSSSCG00000009692	-	97	66.563	Sus_scrofa
ENSMUSG00000021958	Pinx1	76	70.518	ENSSSCG00000031622	-	97	60.062	Sus_scrofa
ENSMUSG00000021958	Pinx1	59	68.500	ENSTGUG00000013313	PINX1	100	69.192	Taeniopygia_guttata
ENSMUSG00000021958	Pinx1	59	64.322	ENSTNIG00000016334	pinx1	57	64.322	Tetraodon_nigroviridis
ENSMUSG00000021958	Pinx1	97	66.978	ENSTTRG00000001679	PINX1	96	66.355	Tursiops_truncatus
ENSMUSG00000021958	Pinx1	95	67.722	ENSUAMG00000015238	PINX1	93	67.296	Ursus_americanus
ENSMUSG00000021958	Pinx1	97	68.421	ENSUMAG00000021812	PINX1	96	68.000	Ursus_maritimus
ENSMUSG00000021958	Pinx1	95	68.987	ENSVVUG00000002273	-	68	69.085	Vulpes_vulpes
ENSMUSG00000021958	Pinx1	97	67.492	ENSVVUG00000024459	-	96	66.975	Vulpes_vulpes
ENSMUSG00000021958	Pinx1	59	62.201	ENSXETG00000000688	pinx1	69	62.679	Xenopus_tropicalis
ENSMUSG00000021958	Pinx1	59	62.673	ENSXCOG00000005224	pinx1	58	63.426	Xiphophorus_couchianus
ENSMUSG00000021958	Pinx1	59	66.029	ENSXMAG00000027197	pinx1	62	66.029	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000228	nuclear chromosome	-	ISO	Component
GO:0000775	chromosome, centromeric region	-	IEA	Component
GO:0000776	kinetochore	-	ISO	Component
GO:0000781	chromosome, telomeric region	11701125.	ISO	Component
GO:0000784	nuclear chromosome, telomeric region	-	ISO	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005730	nucleolus	11701125.	ISO	Component
GO:0005819	spindle	-	ISO	Component
GO:0007004	telomere maintenance via telomerase	11701125.	ISO	Process
GO:0007080	mitotic metaphase plate congression	-	ISO	Process
GO:0010521	telomerase inhibitor activity	-	ISO	Function
GO:0010972	negative regulation of G2/M transition of mitotic cell cycle	-	ISO	Process
GO:0031397	negative regulation of protein ubiquitination	-	ISO	Process
GO:0031647	regulation of protein stability	-	ISO	Process
GO:0032211	negative regulation of telomere maintenance via telomerase	-	ISO	Process
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0051974	negative regulation of telomerase activity	-	ISO	Process
GO:0070034	telomerase RNA binding	-	ISO	Function
GO:0070198	protein localization to chromosome, telomeric region	-	ISO	Process
GO:1902570	protein localization to nucleolus	-	ISO	Process
GO:1904744	positive regulation of telomeric DNA binding	-	ISO	Process
GO:1904751	positive regulation of protein localization to nucleolus	-	ISO	Process