EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022019 (Gene tree)
Gene ID: 219249
Gene Symbol: Tdrd3
Alias: 4732418C03Rik
Full Name: tudor domain containing 3
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 128866 bases
Position: chr14:87416639-87545504
Accession: 2444023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000126189	TUDOR	PF00567.24	2.8e-08	1	1
ENSMUSP00000129019	TUDOR	PF00567.24	2.8e-08	1	1
ENSMUSP00000131542	TUDOR	PF00567.24	2.8e-08	1	1
ENSMUSP00000126189	SMN	PF06003.12	4e-09	1	1
ENSMUSP00000129019	SMN	PF06003.12	4e-09	1	1
ENSMUSP00000131542	SMN	PF06003.12	1.3e-08	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000170712	-	636	-	ENSMUSP00000126212	212 (aa)	-	F6ZI20
ENSMUST00000227304	-	669	-	-	- (aa)	-	-
ENSMUST00000168275	-	2657	XM_006518909	ENSMUSP00000129019	743 (aa)	XP_006518972	Q91W18
ENSMUST00000170865	-	2530	XM_006518910	ENSMUSP00000126189	737 (aa)	XP_006518973	Q91W18
ENSMUST00000163714	-	849	-	-	- (aa)	-	-
ENSMUST00000169504	-	5280	XM_011245039	ENSMUSP00000131542	716 (aa)	XP_011243341	Q91W18

Gene Model

Click here to download ENSMUSG00000022019's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022019's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022019	Tdrd3	100	84.946	ENSG00000083544	TDRD3	100	87.597	Homo_sapiens
ENSMUSG00000022019	Tdrd3	100	48.507	ENSAPOG00000016078	tdrd3	100	48.883	Acanthochromis_polyacanthus
ENSMUSG00000022019	Tdrd3	99	84.447	ENSAMEG00000000082	TDRD3	100	83.110	Ailuropoda_melanoleuca
ENSMUSG00000022019	Tdrd3	99	49.500	ENSACIG00000023900	tdrd3	99	49.812	Amphilophus_citrinellus
ENSMUSG00000022019	Tdrd3	99	49.310	ENSAOCG00000001410	tdrd3	99	49.064	Amphiprion_ocellaris
ENSMUSG00000022019	Tdrd3	99	47.588	ENSAPEG00000022810	tdrd3	99	47.021	Amphiprion_percula
ENSMUSG00000022019	Tdrd3	99	49.427	ENSATEG00000014570	tdrd3	99	49.810	Anabas_testudineus
ENSMUSG00000022019	Tdrd3	92	71.261	ENSAPLG00000014316	TDRD3	100	70.674	Anas_platyrhynchos
ENSMUSG00000022019	Tdrd3	100	68.322	ENSACAG00000004923	TDRD3	100	67.785	Anolis_carolinensis
ENSMUSG00000022019	Tdrd3	99	83.129	ENSANAG00000030827	-	99	83.129	Aotus_nancymaae
ENSMUSG00000022019	Tdrd3	84	69.256	ENSANAG00000027927	-	98	69.256	Aotus_nancymaae
ENSMUSG00000022019	Tdrd3	60	59.284	ENSACLG00000022962	tdrd3	100	49.375	Astatotilapia_calliptera
ENSMUSG00000022019	Tdrd3	100	48.944	ENSAMXG00000006847	tdrd3	100	49.315	Astyanax_mexicanus
ENSMUSG00000022019	Tdrd3	100	83.199	ENSBTAG00000009308	TDRD3	100	83.199	Bos_taurus
ENSMUSG00000022019	Tdrd3	100	84.274	ENSCJAG00000003853	TDRD3	100	84.274	Callithrix_jacchus
ENSMUSG00000022019	Tdrd3	99	83.967	ENSCAFG00000023746	-	99	83.967	Canis_familiaris
ENSMUSG00000022019	Tdrd3	99	84.447	ENSCAFG00020018076	-	99	84.795	Canis_lupus_dingo
ENSMUSG00000022019	Tdrd3	67	77.172	ENSCAFG00020015271	-	94	77.172	Canis_lupus_dingo
ENSMUSG00000022019	Tdrd3	100	82.392	ENSCHIG00000020019	TDRD3	100	82.392	Capra_hircus
ENSMUSG00000022019	Tdrd3	98	83.862	ENSTSYG00000002254	TDRD3	100	83.862	Carlito_syrichta
ENSMUSG00000022019	Tdrd3	100	70.461	ENSCAPG00000012313	TDRD3	99	70.461	Cavia_aperea
ENSMUSG00000022019	Tdrd3	100	76.510	ENSCPOG00000010437	TDRD3	100	76.510	Cavia_porcellus
ENSMUSG00000022019	Tdrd3	100	84.677	ENSCCAG00000023831	TDRD3	100	84.677	Cebus_capucinus
ENSMUSG00000022019	Tdrd3	100	84.409	ENSCATG00000029498	TDRD3	100	84.409	Cercocebus_atys
ENSMUSG00000022019	Tdrd3	99	83.333	ENSCLAG00000002654	TDRD3	100	83.311	Chinchilla_lanigera
ENSMUSG00000022019	Tdrd3	100	84.274	ENSCSAG00000017640	TDRD3	100	84.274	Chlorocebus_sabaeus
ENSMUSG00000022019	Tdrd3	74	86.760	ENSCHOG00000012825	TDRD3	86	86.760	Choloepus_hoffmanni
ENSMUSG00000022019	Tdrd3	99	72.951	ENSCPBG00000026646	TDRD3	99	71.287	Chrysemys_picta_bellii
ENSMUSG00000022019	Tdrd3	99	84.247	ENSCANG00000034303	TDRD3	100	83.257	Colobus_angolensis_palliatus
ENSMUSG00000022019	Tdrd3	100	87.383	ENSCGRG00001011297	Tdrd3	100	87.383	Cricetulus_griseus_chok1gshd
ENSMUSG00000022019	Tdrd3	99	86.703	ENSCGRG00000015535	-	100	86.656	Cricetulus_griseus_crigri
ENSMUSG00000022019	Tdrd3	99	49.235	ENSCSEG00000000670	tdrd3	99	48.597	Cynoglossus_semilaevis
ENSMUSG00000022019	Tdrd3	95	47.844	ENSCVAG00000015641	tdrd3	75	60.671	Cyprinodon_variegatus
ENSMUSG00000022019	Tdrd3	100	51.042	ENSDARG00000025421	tdrd3	100	50.065	Danio_rerio
ENSMUSG00000022019	Tdrd3	100	81.452	ENSDNOG00000002011	TDRD3	100	81.452	Dasypus_novemcinctus
ENSMUSG00000022019	Tdrd3	100	83.602	ENSDORG00000008714	Tdrd3	100	83.602	Dipodomys_ordii
ENSMUSG00000022019	Tdrd3	99	36.159	ENSEBUG00000011812	tdrd3	91	37.022	Eptatretus_burgeri
ENSMUSG00000022019	Tdrd3	100	84.543	ENSEASG00005015575	TDRD3	100	84.543	Equus_asinus_asinus
ENSMUSG00000022019	Tdrd3	100	84.677	ENSECAG00000000550	TDRD3	100	84.677	Equus_caballus
ENSMUSG00000022019	Tdrd3	88	74.347	ENSEEUG00000002192	TDRD3	100	73.425	Erinaceus_europaeus
ENSMUSG00000022019	Tdrd3	75	55.639	ENSELUG00000000994	tdrd3	66	55.639	Esox_lucius
ENSMUSG00000022019	Tdrd3	100	84.409	ENSFCAG00000022126	TDRD3	100	84.409	Felis_catus
ENSMUSG00000022019	Tdrd3	99	70.902	ENSFALG00000007927	TDRD3	98	70.492	Ficedula_albicollis
ENSMUSG00000022019	Tdrd3	99	83.447	ENSFDAG00000011552	TDRD3	100	83.447	Fukomys_damarensis
ENSMUSG00000022019	Tdrd3	99	48.784	ENSFHEG00000009513	tdrd3	55	61.021	Fundulus_heteroclitus
ENSMUSG00000022019	Tdrd3	59	68.627	ENSGMOG00000005733	tdrd3	74	62.500	Gadus_morhua
ENSMUSG00000022019	Tdrd3	100	70.777	ENSGALG00000016936	TDRD3	100	70.241	Gallus_gallus
ENSMUSG00000022019	Tdrd3	99	47.643	ENSGAFG00000012013	tdrd3	55	59.070	Gambusia_affinis
ENSMUSG00000022019	Tdrd3	59	59.497	ENSGACG00000015264	tdrd3	57	59.497	Gasterosteus_aculeatus
ENSMUSG00000022019	Tdrd3	100	71.716	ENSGAGG00000003173	TDRD3	100	71.716	Gopherus_agassizii
ENSMUSG00000022019	Tdrd3	99	84.658	ENSGGOG00000025560	TDRD3	100	84.658	Gorilla_gorilla
ENSMUSG00000022019	Tdrd3	99	46.745	ENSHBUG00000007081	tdrd3	100	49.375	Haplochromis_burtoni
ENSMUSG00000022019	Tdrd3	97	72.046	ENSHGLG00000010652	-	99	72.046	Heterocephalus_glaber_female
ENSMUSG00000022019	Tdrd3	88	75.460	ENSHGLG00000014119	-	100	75.460	Heterocephalus_glaber_female
ENSMUSG00000022019	Tdrd3	99	74.282	ENSHGLG00000009668	-	100	73.813	Heterocephalus_glaber_female
ENSMUSG00000022019	Tdrd3	100	83.893	ENSHGLG00000018707	-	100	83.893	Heterocephalus_glaber_female
ENSMUSG00000022019	Tdrd3	99	83.721	ENSHGLG00100010966	-	100	83.721	Heterocephalus_glaber_male
ENSMUSG00000022019	Tdrd3	77	85.315	ENSHGLG00100017738	-	100	85.315	Heterocephalus_glaber_male
ENSMUSG00000022019	Tdrd3	99	46.044	ENSHCOG00000002157	tdrd3	99	45.855	Hippocampus_comes
ENSMUSG00000022019	Tdrd3	100	49.248	ENSIPUG00000012320	tdrd3	100	50.126	Ictalurus_punctatus
ENSMUSG00000022019	Tdrd3	99	84.247	ENSSTOG00000028945	-	100	84.247	Ictidomys_tridecemlineatus
ENSMUSG00000022019	Tdrd3	98	82.548	ENSJJAG00000023665	Tdrd3	98	82.548	Jaculus_jaculus
ENSMUSG00000022019	Tdrd3	77	60.789	ENSKMAG00000021849	tdrd3	74	60.789	Kryptolebias_marmoratus
ENSMUSG00000022019	Tdrd3	97	46.988	ENSLBEG00000011777	tdrd3	99	47.942	Labrus_bergylta
ENSMUSG00000022019	Tdrd3	99	61.299	ENSLACG00000001412	TDRD3	99	60.691	Latimeria_chalumnae
ENSMUSG00000022019	Tdrd3	100	57.427	ENSLOCG00000004652	tdrd3	100	57.029	Lepisosteus_oculatus
ENSMUSG00000022019	Tdrd3	69	81.423	ENSLAFG00000002705	TDRD3	100	80.435	Loxodonta_africana
ENSMUSG00000022019	Tdrd3	100	84.812	ENSMFAG00000007606	TDRD3	100	84.812	Macaca_fascicularis
ENSMUSG00000022019	Tdrd3	100	84.812	ENSMMUG00000007169	TDRD3	100	84.812	Macaca_mulatta
ENSMUSG00000022019	Tdrd3	100	84.543	ENSMNEG00000002038	TDRD3	100	84.543	Macaca_nemestrina
ENSMUSG00000022019	Tdrd3	55	81.235	ENSMLEG00000039737	TDRD3	98	81.061	Mandrillus_leucophaeus
ENSMUSG00000022019	Tdrd3	99	47.985	ENSMAMG00000003998	tdrd3	56	59.862	Mastacembelus_armatus
ENSMUSG00000022019	Tdrd3	60	59.284	ENSMZEG00005004551	tdrd3	100	49.375	Maylandia_zebra
ENSMUSG00000022019	Tdrd3	99	70.636	ENSMGAG00000014961	TDRD3	100	69.758	Meleagris_gallopavo
ENSMUSG00000022019	Tdrd3	100	89.530	ENSMAUG00000012562	Tdrd3	100	89.530	Mesocricetus_auratus
ENSMUSG00000022019	Tdrd3	100	84.543	ENSMICG00000009982	TDRD3	100	84.543	Microcebus_murinus
ENSMUSG00000022019	Tdrd3	100	89.113	ENSMOCG00000012962	Tdrd3	100	89.113	Microtus_ochrogaster
ENSMUSG00000022019	Tdrd3	99	48.622	ENSMMOG00000018156	tdrd3	56	60.137	Mola_mola
ENSMUSG00000022019	Tdrd3	85	65.472	ENSMODG00000006316	TDRD3	100	65.472	Monodelphis_domestica
ENSMUSG00000022019	Tdrd3	96	49.740	ENSMALG00000015327	tdrd3	53	61.314	Monopterus_albus
ENSMUSG00000022019	Tdrd3	100	96.505	MGP_CAROLIEiJ_G0019551	Tdrd3	100	96.505	Mus_caroli
ENSMUSG00000022019	Tdrd3	100	96.102	MGP_PahariEiJ_G0030569	Tdrd3	100	96.102	Mus_pahari
ENSMUSG00000022019	Tdrd3	100	98.250	MGP_SPRETEiJ_G0020448	Tdrd3	100	98.250	Mus_spretus
ENSMUSG00000022019	Tdrd3	86	82.276	ENSMPUG00000009630	TDRD3	91	81.240	Mustela_putorius_furo
ENSMUSG00000022019	Tdrd3	98	79.801	ENSMLUG00000000235	TDRD3	99	80.086	Myotis_lucifugus
ENSMUSG00000022019	Tdrd3	100	86.559	ENSNGAG00000004523	Tdrd3	100	86.559	Nannospalax_galili
ENSMUSG00000022019	Tdrd3	60	59.284	ENSNBRG00000018789	tdrd3	100	48.645	Neolamprologus_brichardi
ENSMUSG00000022019	Tdrd3	100	84.274	ENSNLEG00000015920	TDRD3	100	84.274	Nomascus_leucogenys
ENSMUSG00000022019	Tdrd3	88	65.491	ENSMEUG00000010114	TDRD3	100	65.491	Notamacropus_eugenii
ENSMUSG00000022019	Tdrd3	88	74.808	ENSOPRG00000007868	TDRD3	100	74.808	Ochotona_princeps
ENSMUSG00000022019	Tdrd3	99	81.259	ENSODEG00000000576	-	99	80.537	Octodon_degus
ENSMUSG00000022019	Tdrd3	99	69.324	ENSODEG00000014559	-	100	69.324	Octodon_degus
ENSMUSG00000022019	Tdrd3	59	60.682	ENSONIG00000003233	tdrd3	56	61.806	Oreochromis_niloticus
ENSMUSG00000022019	Tdrd3	50	66.125	ENSOANG00000011775	-	99	65.854	Ornithorhynchus_anatinus
ENSMUSG00000022019	Tdrd3	100	84.812	ENSOCUG00000014261	TDRD3	100	84.812	Oryctolagus_cuniculus
ENSMUSG00000022019	Tdrd3	99	48.015	ENSORLG00000004502	tdrd3	95	46.533	Oryzias_latipes
ENSMUSG00000022019	Tdrd3	99	47.464	ENSORLG00020017271	tdrd3	55	59.574	Oryzias_latipes_hni
ENSMUSG00000022019	Tdrd3	99	48.258	ENSORLG00015015519	tdrd3	98	47.625	Oryzias_latipes_hsok
ENSMUSG00000022019	Tdrd3	99	48.504	ENSOMEG00000015668	tdrd3	99	48.250	Oryzias_melastigma
ENSMUSG00000022019	Tdrd3	100	83.468	ENSOGAG00000005898	TDRD3	100	83.468	Otolemur_garnettii
ENSMUSG00000022019	Tdrd3	99	82.763	ENSOARG00000006244	TDRD3	99	82.877	Ovis_aries
ENSMUSG00000022019	Tdrd3	100	84.812	ENSPPAG00000010477	TDRD3	100	84.812	Pan_paniscus
ENSMUSG00000022019	Tdrd3	99	84.247	ENSPPRG00000008512	TDRD3	100	84.247	Panthera_pardus
ENSMUSG00000022019	Tdrd3	99	84.110	ENSPTIG00000002537	TDRD3	100	84.110	Panthera_tigris_altaica
ENSMUSG00000022019	Tdrd3	100	84.677	ENSPTRG00000005918	TDRD3	100	84.690	Pan_troglodytes
ENSMUSG00000022019	Tdrd3	100	84.543	ENSPANG00000019138	TDRD3	100	84.543	Papio_anubis
ENSMUSG00000022019	Tdrd3	99	49.398	ENSPKIG00000008894	tdrd3	99	49.264	Paramormyrops_kingsleyae
ENSMUSG00000022019	Tdrd3	88	69.832	ENSPSIG00000013821	TDRD3	100	69.832	Pelodiscus_sinensis
ENSMUSG00000022019	Tdrd3	100	47.516	ENSPMGG00000015263	tdrd3	84	58.065	Periophthalmus_magnuspinnatus
ENSMUSG00000022019	Tdrd3	100	89.247	ENSPEMG00000004287	Tdrd3	100	89.247	Peromyscus_maniculatus_bairdii
ENSMUSG00000022019	Tdrd3	100	78.418	ENSPCIG00000011476	-	100	78.418	Phascolarctos_cinereus
ENSMUSG00000022019	Tdrd3	99	49.100	ENSPFOG00000012450	tdrd3	99	49.359	Poecilia_formosa
ENSMUSG00000022019	Tdrd3	92	47.779	ENSPLAG00000016397	tdrd3	51	60.417	Poecilia_latipinna
ENSMUSG00000022019	Tdrd3	92	47.211	ENSPMEG00000019048	tdrd3	52	59.843	Poecilia_mexicana
ENSMUSG00000022019	Tdrd3	99	48.477	ENSPREG00000021145	tdrd3	55	60.000	Poecilia_reticulata
ENSMUSG00000022019	Tdrd3	100	84.409	ENSPPYG00000005401	TDRD3	100	84.409	Pongo_abelii
ENSMUSG00000022019	Tdrd3	88	74.962	ENSPCAG00000014959	TDRD3	100	74.808	Procavia_capensis
ENSMUSG00000022019	Tdrd3	75	88.542	ENSPCOG00000019937	TDRD3	100	88.542	Propithecus_coquereli
ENSMUSG00000022019	Tdrd3	88	82.642	ENSPVAG00000010549	TDRD3	100	82.642	Pteropus_vampyrus
ENSMUSG00000022019	Tdrd3	60	59.284	ENSPNYG00000001569	tdrd3	100	49.250	Pundamilia_nyererei
ENSMUSG00000022019	Tdrd3	100	50.803	ENSPNAG00000026219	tdrd3	100	49.566	Pygocentrus_nattereri
ENSMUSG00000022019	Tdrd3	88	89.862	ENSRNOG00000009034	Tdrd3	100	89.862	Rattus_norvegicus
ENSMUSG00000022019	Tdrd3	99	81.943	ENSRBIG00000031218	TDRD3	99	81.511	Rhinopithecus_bieti
ENSMUSG00000022019	Tdrd3	99	84.247	ENSRROG00000044516	TDRD3	100	83.410	Rhinopithecus_roxellana
ENSMUSG00000022019	Tdrd3	99	84.795	ENSSBOG00000022790	TDRD3	100	84.795	Saimiri_boliviensis_boliviensis
ENSMUSG00000022019	Tdrd3	99	75.341	ENSSHAG00000011994	TDRD3	100	75.341	Sarcophilus_harrisii
ENSMUSG00000022019	Tdrd3	99	47.769	ENSSFOG00015005175	tdrd3	96	47.403	Scleropages_formosus
ENSMUSG00000022019	Tdrd3	59	58.810	ENSSMAG00000011677	tdrd3	58	58.810	Scophthalmus_maximus
ENSMUSG00000022019	Tdrd3	78	60.641	ENSSDUG00000004594	tdrd3	75	60.641	Seriola_dumerili
ENSMUSG00000022019	Tdrd3	99	45.876	ENSSLDG00000002918	tdrd3	74	56.051	Seriola_lalandi_dorsalis
ENSMUSG00000022019	Tdrd3	88	81.595	ENSSARG00000003028	TDRD3	100	81.288	Sorex_araneus
ENSMUSG00000022019	Tdrd3	99	72.245	ENSSPUG00000001191	TDRD3	98	72.109	Sphenodon_punctatus
ENSMUSG00000022019	Tdrd3	99	49.873	ENSSPAG00000005342	tdrd3	99	49.561	Stegastes_partitus
ENSMUSG00000022019	Tdrd3	100	84.295	ENSSSCG00000009449	TDRD3	100	84.295	Sus_scrofa
ENSMUSG00000022019	Tdrd3	100	71.486	ENSTGUG00000012476	-	100	71.084	Taeniopygia_guttata
ENSMUSG00000022019	Tdrd3	60	59.732	ENSTRUG00000017194	tdrd3	57	59.732	Takifugu_rubripes
ENSMUSG00000022019	Tdrd3	100	48.834	ENSTNIG00000005230	tdrd3	100	48.834	Tetraodon_nigroviridis
ENSMUSG00000022019	Tdrd3	88	77.077	ENSTTRG00000010071	TDRD3	99	77.077	Tursiops_truncatus
ENSMUSG00000022019	Tdrd3	92	84.265	ENSUAMG00000017369	-	98	84.265	Ursus_americanus
ENSMUSG00000022019	Tdrd3	97	81.907	ENSUMAG00000014526	TDRD3	100	83.871	Ursus_maritimus
ENSMUSG00000022019	Tdrd3	88	83.717	ENSVPAG00000011763	TDRD3	100	83.717	Vicugna_pacos
ENSMUSG00000022019	Tdrd3	99	84.417	ENSVVUG00000029140	TDRD3	98	83.644	Vulpes_vulpes
ENSMUSG00000022019	Tdrd3	99	48.302	ENSXCOG00000001875	tdrd3	97	48.615	Xiphophorus_couchianus
ENSMUSG00000022019	Tdrd3	99	48.535	ENSXMAG00000005103	tdrd3	99	48.799	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003682	chromatin binding	-	ISO	Function
GO:0003713	transcription coactivator activity	-	ISO	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0035064	methylated histone binding	-	ISO	Function
GO:0035145	exon-exon junction complex	-	ISO	Component