EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022142 (Gene tree)
Gene ID: 170762
Gene Symbol: Nup155
Alias: D930027M19Rik
Full Name: nucleoporin 155
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 51975
Position: chr15: 8109273-8161247
Accession: 2181182
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000230337	-	762	-	-	- (aa)	-	-
ENSMUST00000229466	-	594	-	-	- (aa)	-	-
ENSMUST00000229039	-	558	-	-	- (aa)	-	-
ENSMUST00000163765	-	7832	-	ENSMUSP00000128819	1391 (aa)	-	Q99P88
ENSMUST00000230017	-	4391	XM_006519972	ENSMUSP00000155093	1346 (aa)	XP_006520035	A0A2R8VHH1
ENSMUST00000230647	-	2730	-	-	- (aa)	-	-
ENSMUST00000230925	-	2419	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000022142's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022142's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022142	Nup155	98	32.578	FBgn0021761	Nup154	99	32.512	Drosophila_melanogaster
ENSMUSG00000022142	Nup155	100	94.828	ENSG00000113569	NUP155	100	95.120	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000972	transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery	21873635.	IBA	Process
GO:0005634	nucleus	-	IEA	Component
GO:0005635	nuclear envelope	-	ISO	Component
GO:0005643	nuclear pore	-	IEA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006406	mRNA export from nucleus	19070573.	IMP	Process
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0006606	protein import into nucleus	19070573.	IMP	Process
GO:0006998	nuclear envelope organization	-	ISO	Process
GO:0015031	protein transport	-	IEA	Process
GO:0016020	membrane	-	IEA	Component
GO:0017056	structural constituent of nuclear pore	21873635.	IBA	Function
GO:0031965	nuclear membrane	-	ISO	Component
GO:0036228	protein localization to nuclear inner membrane	21873635.	IBA	Process
GO:0044611	nuclear pore inner ring	21873635.	IBA	Component
GO:0051028	mRNA transport	-	IEA	Process
GO:0086014	atrial cardiac muscle cell action potential	19070573.	IMP	Process