EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022186 (Gene tree)
Gene ID: 67041
Gene Symbol: Oxct1
Alias: 2610008O03Rik|Scot-s
Full Name: 3-oxoacid CoA transferase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 128962
Position: chr15: 4026383-4155344
Accession: 1914291
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000124591	-	480	-	-	- (aa)	-	-
ENSMUST00000110690	-	3527	-	ENSMUSP00000106318	520 (aa)	-	Q9D0K2
ENSMUST00000133130	-	471	-	-	- (aa)	-	-
ENSMUST00000131240	-	699	-	-	- (aa)	-	-
ENSMUST00000138927	-	1743	-	ENSMUSP00000116343	486 (aa)	-	Q3UJQ9

Gene Model

Click here to download ENSMUSG00000022186's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00072	Synthesis and degradation of ketone bodies	KEGG
mmu00280	Valine, leucine and isoleucine degradation	KEGG
mmu00650	Butanoate metabolism	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022186's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022186	Oxct1	93	65.164	WBGene00007330	C05C10.3	93	64.549	Caenorhabditis_elegans

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0008260	3-oxoacid CoA-transferase activity	12534938.	IDA	Function
GO:0008260	3-oxoacid CoA-transferase activity	-	ISO	Function
GO:0008410	CoA-transferase activity	-	IEA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0035774	positive regulation of insulin secretion involved in cellular response to glucose stimulus	-	ISO	Process
GO:0042182	ketone catabolic process	21209089.	IMP	Process
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0046950	cellular ketone body metabolic process	12534938.	IDA	Process
GO:0046950	cellular ketone body metabolic process	-	ISO	Process
GO:0046952	ketone body catabolic process	21209089.	IMP	Process