EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022204 (Gene tree)
Gene ID: 68966
Gene Symbol: Ngdn
Alias: 1500001L15Rik|Ngd|neuroguidin
Full Name: neuroguidin%2C EIF4E binding protein
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 8684 bases
Position: chr14:55015454-55024137
Accession: 1916216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000022815	Sas10_Utp3	PF04000.15	9.2e-15	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000226658	-	236	-	-	- (aa)	-	-
ENSMUST00000022815	-	1200	-	ENSMUSP00000022815	315 (aa)	-	Q9DB96
ENSMUST00000226258	-	427	-	-	- (aa)	-	-
ENSMUST00000227833	-	482	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000022204's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022204's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022204	Ngdn	98	88.710	ENSG00000129460	NGDN	95	88.814	Homo_sapiens
ENSMUSG00000022204	Ngdn	81	56.202	ENSAPOG00000016411	ngdn	91	54.682	Acanthochromis_polyacanthus
ENSMUSG00000022204	Ngdn	93	88.776	ENSAMEG00000016660	NGDN	92	88.776	Ailuropoda_melanoleuca
ENSMUSG00000022204	Ngdn	90	53.147	ENSACIG00000021676	ngdn	89	53.497	Amphilophus_citrinellus
ENSMUSG00000022204	Ngdn	90	54.861	ENSAOCG00000015818	ngdn	92	53.535	Amphiprion_ocellaris
ENSMUSG00000022204	Ngdn	83	55.513	ENSAPEG00000009589	ngdn	92	54.044	Amphiprion_percula
ENSMUSG00000022204	Ngdn	92	53.220	ENSATEG00000020513	ngdn	92	53.898	Anabas_testudineus
ENSMUSG00000022204	Ngdn	93	68.707	ENSACAG00000007340	NGDN	89	67.010	Anolis_carolinensis
ENSMUSG00000022204	Ngdn	93	88.776	ENSANAG00000037066	NGDN	94	88.475	Aotus_nancymaae
ENSMUSG00000022204	Ngdn	93	54.667	ENSACLG00000016289	ngdn	93	54.667	Astatotilapia_calliptera
ENSMUSG00000022204	Ngdn	87	53.069	ENSAMXG00000000514	ngdn	91	51.601	Astyanax_mexicanus
ENSMUSG00000022204	Ngdn	94	90.169	ENSBTAG00000009595	NGDN	93	91.481	Bos_taurus
ENSMUSG00000022204	Ngdn	75	36.287	WBGene00003059	lpd-2	70	36.626	Caenorhabditis_elegans
ENSMUSG00000022204	Ngdn	99	88.535	ENSCJAG00000007530	NGDN	94	88.814	Callithrix_jacchus
ENSMUSG00000022204	Ngdn	93	89.226	ENSCAFG00000011631	NGDN	94	88.926	Canis_familiaris
ENSMUSG00000022204	Ngdn	93	89.226	ENSCAFG00020004943	NGDN	94	88.926	Canis_lupus_dingo
ENSMUSG00000022204	Ngdn	94	89.831	ENSCHIG00000015780	NGDN	94	89.831	Capra_hircus
ENSMUSG00000022204	Ngdn	99	87.261	ENSTSYG00000009606	NGDN	94	87.458	Carlito_syrichta
ENSMUSG00000022204	Ngdn	80	86.166	ENSCAPG00000014742	NGDN	94	81.961	Cavia_aperea
ENSMUSG00000022204	Ngdn	93	88.055	ENSCPOG00000008240	NGDN	94	84.407	Cavia_porcellus
ENSMUSG00000022204	Ngdn	93	88.776	ENSCCAG00000023047	NGDN	94	83.729	Cebus_capucinus
ENSMUSG00000022204	Ngdn	93	89.078	ENSCATG00000042790	NGDN	94	88.966	Cercocebus_atys
ENSMUSG00000022204	Ngdn	94	88.814	ENSCLAG00000012885	NGDN	94	84.407	Chinchilla_lanigera
ENSMUSG00000022204	Ngdn	93	89.078	ENSCSAG00000015952	NGDN	94	88.814	Chlorocebus_sabaeus
ENSMUSG00000022204	Ngdn	94	89.153	ENSCHOG00000009857	NGDN	95	89.153	Choloepus_hoffmanni
ENSMUSG00000022204	Ngdn	97	63.518	ENSCPBG00000025903	NGDN	70	61.034	Chrysemys_picta_bellii
ENSMUSG00000022204	Ngdn	93	89.761	ENSCANG00000031356	NGDN	94	89.492	Colobus_angolensis_palliatus
ENSMUSG00000022204	Ngdn	93	91.468	ENSCGRG00001024371	Ngdn	94	91.186	Cricetulus_griseus_chok1gshd
ENSMUSG00000022204	Ngdn	93	91.468	ENSCGRG00000018219	Ngdn	94	91.186	Cricetulus_griseus_crigri
ENSMUSG00000022204	Ngdn	89	54.770	ENSCSEG00000008801	ngdn	88	54.417	Cynoglossus_semilaevis
ENSMUSG00000022204	Ngdn	89	54.610	ENSDARG00000045372	ngdn	89	53.901	Danio_rerio
ENSMUSG00000022204	Ngdn	96	87.789	ENSDNOG00000005395	NGDN	93	88.055	Dasypus_novemcinctus
ENSMUSG00000022204	Ngdn	92	88.966	ENSDORG00000010731	Ngdn	93	88.966	Dipodomys_ordii
ENSMUSG00000022204	Ngdn	82	40.288	FBgn0031736	CG11030	88	40.000	Drosophila_melanogaster
ENSMUSG00000022204	Ngdn	94	80.678	ENSETEG00000007531	NGDN	95	80.678	Echinops_telfairi
ENSMUSG00000022204	Ngdn	93	46.512	ENSEBUG00000000664	ngdn	91	46.333	Eptatretus_burgeri
ENSMUSG00000022204	Ngdn	87	90.511	ENSEASG00005011793	NGDN	94	90.511	Equus_asinus_asinus
ENSMUSG00000022204	Ngdn	99	88.854	ENSECAG00000006081	NGDN	94	88.814	Equus_caballus
ENSMUSG00000022204	Ngdn	75	86.498	ENSEEUG00000011829	NGDN	100	86.498	Erinaceus_europaeus
ENSMUSG00000022204	Ngdn	92	54.608	ENSELUG00000022676	ngdn	86	53.242	Esox_lucius
ENSMUSG00000022204	Ngdn	99	87.261	ENSFCAG00000009093	NGDN	94	84.746	Felis_catus
ENSMUSG00000022204	Ngdn	94	89.492	ENSFDAG00000011611	NGDN	94	89.492	Fukomys_damarensis
ENSMUSG00000022204	Ngdn	92	55.593	ENSFHEG00000007207	ngdn	92	54.576	Fundulus_heteroclitus
ENSMUSG00000022204	Ngdn	89	54.093	ENSGMOG00000003876	ngdn	99	51.601	Gadus_morhua
ENSMUSG00000022204	Ngdn	92	55.593	ENSGAFG00000017102	ngdn	92	54.237	Gambusia_affinis
ENSMUSG00000022204	Ngdn	90	54.483	ENSGACG00000002164	ngdn	99	53.103	Gasterosteus_aculeatus
ENSMUSG00000022204	Ngdn	97	61.889	ENSGAGG00000016471	NGDN	93	58.741	Gopherus_agassizii
ENSMUSG00000022204	Ngdn	96	89.109	ENSGGOG00000005000	NGDN	94	89.492	Gorilla_gorilla
ENSMUSG00000022204	Ngdn	93	54.667	ENSHBUG00000019489	ngdn	93	54.667	Haplochromis_burtoni
ENSMUSG00000022204	Ngdn	94	88.814	ENSHGLG00000008896	NGDN	94	88.814	Heterocephalus_glaber_female
ENSMUSG00000022204	Ngdn	94	88.814	ENSHGLG00100014352	NGDN	94	88.814	Heterocephalus_glaber_male
ENSMUSG00000022204	Ngdn	91	53.448	ENSHCOG00000019913	ngdn	90	51.379	Hippocampus_comes
ENSMUSG00000022204	Ngdn	90	55.634	ENSIPUG00000008128	ngdn	89	53.521	Ictalurus_punctatus
ENSMUSG00000022204	Ngdn	94	91.525	ENSSTOG00000002637	NGDN	94	91.525	Ictidomys_tridecemlineatus
ENSMUSG00000022204	Ngdn	99	79.936	ENSJJAG00000010601	-	93	79.661	Jaculus_jaculus
ENSMUSG00000022204	Ngdn	93	54.515	ENSKMAG00000018719	ngdn	91	53.512	Kryptolebias_marmoratus
ENSMUSG00000022204	Ngdn	90	55.556	ENSLBEG00000027237	ngdn	93	54.296	Labrus_bergylta
ENSMUSG00000022204	Ngdn	84	59.707	ENSLACG00000005765	NGDN	91	59.707	Latimeria_chalumnae
ENSMUSG00000022204	Ngdn	93	90.816	ENSLAFG00000013953	NGDN	94	90.508	Loxodonta_africana
ENSMUSG00000022204	Ngdn	93	88.737	ENSMFAG00000033387	NGDN	94	88.475	Macaca_fascicularis
ENSMUSG00000022204	Ngdn	93	88.737	ENSMMUG00000014766	NGDN	94	88.475	Macaca_mulatta
ENSMUSG00000022204	Ngdn	93	88.737	ENSMNEG00000038334	NGDN	94	88.621	Macaca_nemestrina
ENSMUSG00000022204	Ngdn	93	89.078	ENSMLEG00000037525	NGDN	94	88.814	Mandrillus_leucophaeus
ENSMUSG00000022204	Ngdn	89	52.128	ENSMAMG00000007995	ngdn	83	50.175	Mastacembelus_armatus
ENSMUSG00000022204	Ngdn	93	54.667	ENSMZEG00005011874	ngdn	93	54.667	Maylandia_zebra
ENSMUSG00000022204	Ngdn	86	85.609	ENSMAUG00000011909	Ngdn	93	92.308	Mesocricetus_auratus
ENSMUSG00000022204	Ngdn	99	88.854	ENSMICG00000010111	NGDN	94	88.814	Microcebus_murinus
ENSMUSG00000022204	Ngdn	93	90.136	ENSMOCG00000021605	Ngdn	94	89.831	Microtus_ochrogaster
ENSMUSG00000022204	Ngdn	93	49.669	ENSMMOG00000005420	ngdn	92	48.173	Mola_mola
ENSMUSG00000022204	Ngdn	94	85.424	ENSMODG00000004257	NGDN	91	85.424	Monodelphis_domestica
ENSMUSG00000022204	Ngdn	93	52.159	ENSMALG00000019654	ngdn	93	51.495	Monopterus_albus
ENSMUSG00000022204	Ngdn	100	99.048	MGP_CAROLIEiJ_G0019285	Ngdn	100	99.048	Mus_caroli
ENSMUSG00000022204	Ngdn	99	96.497	MGP_PahariEiJ_G0030302	Ngdn	99	96.497	Mus_pahari
ENSMUSG00000022204	Ngdn	100	99.683	MGP_SPRETEiJ_G0020174	Ngdn	100	99.683	Mus_spretus
ENSMUSG00000022204	Ngdn	86	91.111	ENSMPUG00000006439	NGDN	93	91.111	Mustela_putorius_furo
ENSMUSG00000022204	Ngdn	92	88.927	ENSMLUG00000017232	NGDN	92	84.014	Myotis_lucifugus
ENSMUSG00000022204	Ngdn	93	90.444	ENSNGAG00000003165	Ngdn	94	90.169	Nannospalax_galili
ENSMUSG00000022204	Ngdn	83	59.259	ENSNBRG00000023962	ngdn	88	49.653	Neolamprologus_brichardi
ENSMUSG00000022204	Ngdn	93	89.761	ENSNLEG00000027739	NGDN	94	89.492	Nomascus_leucogenys
ENSMUSG00000022204	Ngdn	94	84.068	ENSMEUG00000010596	NGDN	95	84.068	Notamacropus_eugenii
ENSMUSG00000022204	Ngdn	95	88.591	ENSOPRG00000016594	NGDN	94	84.746	Ochotona_princeps
ENSMUSG00000022204	Ngdn	93	88.396	ENSODEG00000002730	NGDN	93	89.399	Octodon_degus
ENSMUSG00000022204	Ngdn	93	54.667	ENSONIG00000008106	ngdn	93	55.000	Oreochromis_niloticus
ENSMUSG00000022204	Ngdn	94	82.095	ENSOANG00000013060	NGDN	94	80.743	Ornithorhynchus_anatinus
ENSMUSG00000022204	Ngdn	95	86.242	ENSOCUG00000013973	NGDN	94	85.763	Oryctolagus_cuniculus
ENSMUSG00000022204	Ngdn	88	52.313	ENSORLG00000006124	ngdn	84	50.345	Oryzias_latipes
ENSMUSG00000022204	Ngdn	88	51.957	ENSORLG00020004656	ngdn	90	50.690	Oryzias_latipes_hni
ENSMUSG00000022204	Ngdn	88	52.669	ENSORLG00015001467	ngdn	90	50.345	Oryzias_latipes_hsok
ENSMUSG00000022204	Ngdn	88	53.025	ENSOMEG00000016586	ngdn	90	51.379	Oryzias_melastigma
ENSMUSG00000022204	Ngdn	93	89.078	ENSOGAG00000008735	NGDN	94	88.814	Otolemur_garnettii
ENSMUSG00000022204	Ngdn	94	89.492	ENSOARG00000019301	NGDN	94	89.492	Ovis_aries
ENSMUSG00000022204	Ngdn	96	89.109	ENSPPAG00000039327	NGDN	94	89.492	Pan_paniscus
ENSMUSG00000022204	Ngdn	93	87.713	ENSPPRG00000020120	NGDN	94	84.746	Panthera_pardus
ENSMUSG00000022204	Ngdn	93	87.372	ENSPTIG00000012462	NGDN	94	84.746	Panthera_tigris_altaica
ENSMUSG00000022204	Ngdn	96	88.779	ENSPTRG00000006177	NGDN	94	89.153	Pan_troglodytes
ENSMUSG00000022204	Ngdn	93	89.078	ENSPANG00000026138	NGDN	94	88.814	Papio_anubis
ENSMUSG00000022204	Ngdn	90	55.517	ENSPKIG00000008183	ngdn	87	52.824	Paramormyrops_kingsleyae
ENSMUSG00000022204	Ngdn	92	50.000	ENSPMGG00000022036	ngdn	93	49.495	Periophthalmus_magnuspinnatus
ENSMUSG00000022204	Ngdn	93	91.468	ENSPEMG00000010734	Ngdn	94	91.525	Peromyscus_maniculatus_bairdii
ENSMUSG00000022204	Ngdn	97	55.449	ENSPMAG00000004469	ngdn	91	53.767	Petromyzon_marinus
ENSMUSG00000022204	Ngdn	93	84.354	ENSPCIG00000012961	NGDN	93	84.354	Phascolarctos_cinereus
ENSMUSG00000022204	Ngdn	92	55.932	ENSPFOG00000010423	ngdn	92	54.576	Poecilia_formosa
ENSMUSG00000022204	Ngdn	92	56.271	ENSPLAG00000022684	ngdn	92	54.915	Poecilia_latipinna
ENSMUSG00000022204	Ngdn	92	56.610	ENSPMEG00000020850	ngdn	92	55.254	Poecilia_mexicana
ENSMUSG00000022204	Ngdn	92	55.593	ENSPREG00000011208	ngdn	92	54.237	Poecilia_reticulata
ENSMUSG00000022204	Ngdn	99	89.389	ENSPPYG00000005670	NGDN	94	89.831	Pongo_abelii
ENSMUSG00000022204	Ngdn	61	85.965	ENSPCAG00000007252	-	63	85.965	Procavia_capensis
ENSMUSG00000022204	Ngdn	94	89.153	ENSPCOG00000027627	NGDN	94	89.153	Propithecus_coquereli
ENSMUSG00000022204	Ngdn	94	88.475	ENSPVAG00000005178	NGDN	95	84.068	Pteropus_vampyrus
ENSMUSG00000022204	Ngdn	93	54.333	ENSPNYG00000013193	ngdn	91	54.333	Pundamilia_nyererei
ENSMUSG00000022204	Ngdn	90	52.962	ENSPNAG00000005995	ngdn	89	52.962	Pygocentrus_nattereri
ENSMUSG00000022204	Ngdn	94	94.915	ENSRNOG00000018069	Ngdn	94	94.915	Rattus_norvegicus
ENSMUSG00000022204	Ngdn	93	89.078	ENSRBIG00000035850	NGDN	94	88.814	Rhinopithecus_bieti
ENSMUSG00000022204	Ngdn	93	89.078	ENSRROG00000031932	NGDN	94	88.814	Rhinopithecus_roxellana
ENSMUSG00000022204	Ngdn	93	89.116	ENSSBOG00000029466	NGDN	99	88.966	Saimiri_boliviensis_boliviensis
ENSMUSG00000022204	Ngdn	94	84.068	ENSSHAG00000015351	NGDN	94	84.068	Sarcophilus_harrisii
ENSMUSG00000022204	Ngdn	88	56.228	ENSSFOG00015012601	ngdn	88	54.965	Scleropages_formosus
ENSMUSG00000022204	Ngdn	93	53.177	ENSSMAG00000020166	ngdn	93	52.843	Scophthalmus_maximus
ENSMUSG00000022204	Ngdn	92	54.576	ENSSDUG00000020600	ngdn	92	53.559	Seriola_dumerili
ENSMUSG00000022204	Ngdn	92	54.915	ENSSLDG00000007140	ngdn	92	53.898	Seriola_lalandi_dorsalis
ENSMUSG00000022204	Ngdn	93	82.313	ENSSARG00000000643	NGDN	95	82.034	Sorex_araneus
ENSMUSG00000022204	Ngdn	91	50.690	ENSSPAG00000021672	ngdn	88	49.655	Stegastes_partitus
ENSMUSG00000022204	Ngdn	93	89.078	ENSSSCG00000002020	-	93	89.078	Sus_scrofa
ENSMUSG00000022204	Ngdn	90	51.379	ENSTRUG00000006677	ngdn	90	51.034	Takifugu_rubripes
ENSMUSG00000022204	Ngdn	91	51.890	ENSTNIG00000018972	ngdn	91	50.172	Tetraodon_nigroviridis
ENSMUSG00000022204	Ngdn	99	89.490	ENSTTRG00000010655	NGDN	95	90.102	Tursiops_truncatus
ENSMUSG00000022204	Ngdn	93	88.776	ENSUAMG00000007475	NGDN	93	90.741	Ursus_americanus
ENSMUSG00000022204	Ngdn	93	89.116	ENSUMAG00000014789	NGDN	80	89.116	Ursus_maritimus
ENSMUSG00000022204	Ngdn	93	89.116	ENSVPAG00000010012	NGDN	95	89.116	Vicugna_pacos
ENSMUSG00000022204	Ngdn	93	88.552	ENSVVUG00000025104	NGDN	95	88.255	Vulpes_vulpes
ENSMUSG00000022204	Ngdn	92	63.230	ENSXETG00000014562	ngdn	92	63.230	Xenopus_tropicalis
ENSMUSG00000022204	Ngdn	92	52.397	ENSXCOG00000005102	ngdn	90	51.568	Xiphophorus_couchianus
ENSMUSG00000022204	Ngdn	92	55.932	ENSXMAG00000006206	ngdn	92	54.576	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0000775	chromosome, centromeric region	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0006417	regulation of translation	-	IEA	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0042995	cell projection	-	IEA	Component