EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022285 (Gene tree)
Gene ID: 22631
Gene Symbol: Ywhaz
Alias: 1110013I11Rik|14-3-3 zeta
Full Name: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein%2C zeta polypeptide
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 26160
Position: chr15: 36770770-36796929
Accession: 109484
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000226851	-	628	-	ENSMUSP00000153983	166 (aa)	-	A0A2I3BQ03
ENSMUST00000110361	-	2285	-	ENSMUSP00000105990	245 (aa)	-	P63101
ENSMUST00000110362	-	2122	-	ENSMUSP00000105991	245 (aa)	-	P63101
ENSMUST00000022894	-	3288	XM_011245352	ENSMUSP00000022894	245 (aa)	XP_011243654	P63101
ENSMUST00000126184	-	580	-	ENSMUSP00000115928	88 (aa)	-	D3YXN6
ENSMUST00000110359	-	374	-	ENSMUSP00000105988	26 (aa)	-	D3YW45
ENSMUST00000227067	-	388	-	-	- (aa)	-	-
ENSMUST00000151635	-	188	-	ENSMUSP00000120610	44 (aa)	-	D3YXF4
ENSMUST00000154879	-	924	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000022285's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04110	Cell cycle	KEGG
mmu04114	Oocyte meiosis	KEGG
mmu04151	PI3K-Akt signaling pathway	KEGG
mmu04390	Hippo signaling pathway	KEGG
mmu05160	Hepatitis C	KEGG
mmu05161	Hepatitis B	KEGG
mmu05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022285's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022285	Ywhaz	97	88.235	WBGene00001502	ftt-2	98	80.658	Caenorhabditis_elegans
ENSMUSG00000022285	Ywhaz	100	84.091	FBgn0004907	14-3-3zeta	99	81.633	Drosophila_melanogaster
ENSMUSG00000022285	Ywhaz	100	100.000	ENSG00000164924	YWHAZ	100	100.000	Homo_sapiens
ENSMUSG00000022285	Ywhaz	100	92.308	ENSG00000166913	YWHAB	95	92.857	Homo_sapiens
ENSMUSG00000022285	Ywhaz	100	88.636	ENSG00000134308	YWHAQ	100	80.000	Homo_sapiens
ENSMUSG00000022285	Ywhaz	100	92.308	ENSMUSG00000018326	Ywhab	98	86.777	Mus_musculus
ENSMUSG00000022285	Ywhaz	100	88.636	ENSMUSG00000076432	Ywhaq	100	79.592	Mus_musculus
ENSMUSG00000022285	Ywhaz	100	73.077	ENSMUSG00000047281	Sfn	97	71.138	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002553	histamine secretion by mast cell	-	ISO	Process
GO:0005515	protein binding	11124266.12176995.17008314.18495661.19014373.19451227.21390248.21621563.22701344.	IPI	Function
GO:0005634	nucleus	15615787.	IDA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	14651853.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0006605	protein targeting	12446771.	IDA	Process
GO:0006626	protein targeting to mitochondrion	-	ISO	Process
GO:0008039	synaptic target recognition	22124272.	IDA	Process
GO:0008039	synaptic target recognition	22124272.	IMP	Process
GO:0008134	transcription factor binding	-	ISO	Function
GO:0010941	regulation of cell death	19451227.	IGI	Process
GO:0014069	postsynaptic density	-	ISO	Component
GO:0019901	protein kinase binding	-	ISO	Function
GO:0019904	protein domain specific binding	12176995.	IDA	Function
GO:0031252	cell leading edge	-	ISO	Component
GO:0031625	ubiquitin protein ligase binding	-	ISO	Function
GO:0032991	protein-containing complex	-	ISO	Component
GO:0042493	response to drug	-	ISO	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0044325	ion channel binding	-	ISO	Function
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0051683	establishment of Golgi localization	-	ISO	Process
GO:0090128	regulation of synapse maturation	-	ISO	Process
GO:0090168	Golgi reassembly	-	ISO	Process
GO:0098686	hippocampal mossy fiber to CA3 synapse	22124272.	IDA	Component
GO:0098686	hippocampal mossy fiber to CA3 synapse	22124272.	IMP	Component
GO:0098978	glutamatergic synapse	-	ISO	Component