EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022300 (Gene tree)
Gene ID: 223499
Gene Symbol: Dcaf13
Alias: LOC223499|Wdsof1
Full Name: DDB1 and CUL4 associated factor 13
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 33992 bases
Position: chr15:39112865-39146856
Accession: 2684929
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000022909	Sof1	PF04158.14	2.4e-34	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000228436	-	3389	-	-	- (aa)	-	-
ENSMUST00000226224	-	6477	-	-	- (aa)	-	-
ENSMUST00000227219	-	480	-	-	- (aa)	-	-
ENSMUST00000022909	-	1551	-	ENSMUSP00000022909	445 (aa)	-	Q6PAC3

Gene Model

Click here to download ENSMUSG00000022300's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022300's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022300	Dcaf13	98	93.103	ENSG00000164934	DCAF13	100	94.118	Homo_sapiens
ENSMUSG00000022300	Dcaf13	100	78.876	ENSAPOG00000000524	dcaf13	100	78.876	Acanthochromis_polyacanthus
ENSMUSG00000022300	Dcaf13	100	93.258	ENSAMEG00000001595	DCAF13	99	93.258	Ailuropoda_melanoleuca
ENSMUSG00000022300	Dcaf13	100	78.652	ENSACIG00000003110	dcaf13	99	78.652	Amphilophus_citrinellus
ENSMUSG00000022300	Dcaf13	100	78.652	ENSAOCG00000011982	dcaf13	100	78.652	Amphiprion_ocellaris
ENSMUSG00000022300	Dcaf13	95	73.302	ENSAPEG00000021156	dcaf13	95	73.302	Amphiprion_percula
ENSMUSG00000022300	Dcaf13	100	79.551	ENSATEG00000024751	dcaf13	100	79.551	Anabas_testudineus
ENSMUSG00000022300	Dcaf13	100	83.632	ENSAPLG00000002811	DCAF13	100	83.632	Anas_platyrhynchos
ENSMUSG00000022300	Dcaf13	100	84.719	ENSACAG00000009465	DCAF13	100	84.719	Anolis_carolinensis
ENSMUSG00000022300	Dcaf13	100	74.607	ENSANAG00000023472	-	100	74.607	Aotus_nancymaae
ENSMUSG00000022300	Dcaf13	100	93.708	ENSANAG00000020798	DCAF13	100	93.708	Aotus_nancymaae
ENSMUSG00000022300	Dcaf13	100	78.427	ENSACLG00000025212	dcaf13	90	78.427	Astatotilapia_calliptera
ENSMUSG00000022300	Dcaf13	100	76.404	ENSAMXG00000037008	dcaf13	100	76.404	Astyanax_mexicanus
ENSMUSG00000022300	Dcaf13	98	92.874	ENSBTAG00000021449	DCAF13	100	92.809	Bos_taurus
ENSMUSG00000022300	Dcaf13	95	49.764	WBGene00022742	ZK430.7	95	49.764	Caenorhabditis_elegans
ENSMUSG00000022300	Dcaf13	98	94.023	ENSCJAG00000016181	DCAF13	100	93.933	Callithrix_jacchus
ENSMUSG00000022300	Dcaf13	100	94.607	ENSCAFG00000000663	DCAF13	100	94.607	Canis_familiaris
ENSMUSG00000022300	Dcaf13	100	94.607	ENSCAFG00020003044	DCAF13	100	94.607	Canis_lupus_dingo
ENSMUSG00000022300	Dcaf13	100	92.360	ENSCHIG00000020556	DCAF13	100	92.360	Capra_hircus
ENSMUSG00000022300	Dcaf13	100	92.135	ENSTSYG00000003307	DCAF13	100	92.135	Carlito_syrichta
ENSMUSG00000022300	Dcaf13	96	81.733	ENSCAPG00000007305	DCAF13	100	80.998	Cavia_aperea
ENSMUSG00000022300	Dcaf13	100	92.135	ENSCPOG00000012291	DCAF13	100	92.135	Cavia_porcellus
ENSMUSG00000022300	Dcaf13	100	92.584	ENSCCAG00000033103	DCAF13	76	92.584	Cebus_capucinus
ENSMUSG00000022300	Dcaf13	100	65.393	ENSCATG00000037371	-	96	65.393	Cercocebus_atys
ENSMUSG00000022300	Dcaf13	100	94.157	ENSCATG00000032160	DCAF13	85	94.157	Cercocebus_atys
ENSMUSG00000022300	Dcaf13	100	93.034	ENSCLAG00000006565	DCAF13	100	93.034	Chinchilla_lanigera
ENSMUSG00000022300	Dcaf13	100	94.157	ENSCSAG00000011887	DCAF13	100	94.157	Chlorocebus_sabaeus
ENSMUSG00000022300	Dcaf13	72	81.191	ENSCHOG00000003007	-	74	81.191	Choloepus_hoffmanni
ENSMUSG00000022300	Dcaf13	100	85.843	ENSCPBG00000026050	DCAF13	100	85.843	Chrysemys_picta_bellii
ENSMUSG00000022300	Dcaf13	99	64.706	ENSCING00000005282	-	99	64.706	Ciona_intestinalis
ENSMUSG00000022300	Dcaf13	99	63.883	ENSCSAVG00000006538	-	99	63.883	Ciona_savignyi
ENSMUSG00000022300	Dcaf13	100	64.494	ENSCANG00000038828	-	96	64.494	Colobus_angolensis_palliatus
ENSMUSG00000022300	Dcaf13	100	85.393	ENSCANG00000043032	DCAF13	76	85.393	Colobus_angolensis_palliatus
ENSMUSG00000022300	Dcaf13	100	96.180	ENSCGRG00001023256	Dcaf13	100	96.180	Cricetulus_griseus_chok1gshd
ENSMUSG00000022300	Dcaf13	96	95.540	ENSCGRG00000004862	Dcaf13	92	95.540	Cricetulus_griseus_crigri
ENSMUSG00000022300	Dcaf13	100	78.652	ENSCSEG00000013595	dcaf13	100	78.652	Cynoglossus_semilaevis
ENSMUSG00000022300	Dcaf13	100	68.539	ENSCVAG00000010337	dcaf13	100	68.539	Cyprinodon_variegatus
ENSMUSG00000022300	Dcaf13	100	75.281	ENSDARG00000002267	dcaf13	100	75.281	Danio_rerio
ENSMUSG00000022300	Dcaf13	81	90.305	ENSDNOG00000044885	DCAF13	95	90.305	Dasypus_novemcinctus
ENSMUSG00000022300	Dcaf13	100	88.616	ENSDORG00000011873	Dcaf13	100	88.616	Dipodomys_ordii
ENSMUSG00000022300	Dcaf13	99	59.276	FBgn0036500	CG7275	99	59.276	Drosophila_melanogaster
ENSMUSG00000022300	Dcaf13	100	86.801	ENSETEG00000004777	DCAF13	77	86.801	Echinops_telfairi
ENSMUSG00000022300	Dcaf13	99	60.407	ENSEBUG00000008116	dcaf13	99	60.407	Eptatretus_burgeri
ENSMUSG00000022300	Dcaf13	100	93.483	ENSEASG00005001266	DCAF13	100	93.483	Equus_asinus_asinus
ENSMUSG00000022300	Dcaf13	100	93.483	ENSECAG00000009654	DCAF13	100	93.483	Equus_caballus
ENSMUSG00000022300	Dcaf13	100	80.537	ENSEEUG00000003286	DCAF13	77	80.537	Erinaceus_europaeus
ENSMUSG00000022300	Dcaf13	100	70.112	ENSELUG00000006191	dcaf13	99	77.586	Esox_lucius
ENSMUSG00000022300	Dcaf13	100	94.831	ENSFCAG00000027256	DCAF13	100	94.831	Felis_catus
ENSMUSG00000022300	Dcaf13	100	87.416	ENSFALG00000005982	DCAF13	100	87.416	Ficedula_albicollis
ENSMUSG00000022300	Dcaf13	100	92.360	ENSFDAG00000014869	DCAF13	100	92.360	Fukomys_damarensis
ENSMUSG00000022300	Dcaf13	99	78.153	ENSFHEG00000009965	dcaf13	99	78.153	Fundulus_heteroclitus
ENSMUSG00000022300	Dcaf13	100	77.528	ENSGMOG00000005753	dcaf13	100	77.528	Gadus_morhua
ENSMUSG00000022300	Dcaf13	100	87.416	ENSGALG00000034618	DCAF13	79	87.416	Gallus_gallus
ENSMUSG00000022300	Dcaf13	94	79.856	ENSGAFG00000000368	dcaf13	88	79.856	Gambusia_affinis
ENSMUSG00000022300	Dcaf13	100	77.978	ENSGACG00000004840	dcaf13	100	77.978	Gasterosteus_aculeatus
ENSMUSG00000022300	Dcaf13	100	85.169	ENSGAGG00000025283	DCAF13	100	85.169	Gopherus_agassizii
ENSMUSG00000022300	Dcaf13	93	93.689	ENSGGOG00000015124	DCAF13	79	93.602	Gorilla_gorilla
ENSMUSG00000022300	Dcaf13	100	78.427	ENSHBUG00000015794	dcaf13	90	78.427	Haplochromis_burtoni
ENSMUSG00000022300	Dcaf13	100	92.360	ENSHGLG00000008862	DCAF13	100	92.360	Heterocephalus_glaber_female
ENSMUSG00000022300	Dcaf13	100	92.135	ENSHGLG00100017157	DCAF13	100	92.135	Heterocephalus_glaber_male
ENSMUSG00000022300	Dcaf13	100	76.854	ENSHCOG00000014302	dcaf13	100	76.854	Hippocampus_comes
ENSMUSG00000022300	Dcaf13	100	76.854	ENSIPUG00000022430	dcaf13	100	76.854	Ictalurus_punctatus
ENSMUSG00000022300	Dcaf13	98	94.713	ENSSTOG00000008009	DCAF13	100	94.607	Ictidomys_tridecemlineatus
ENSMUSG00000022300	Dcaf13	81	94.444	ENSJJAG00000000742	-	94	94.444	Jaculus_jaculus
ENSMUSG00000022300	Dcaf13	100	84.719	ENSJJAG00000001990	-	100	84.719	Jaculus_jaculus
ENSMUSG00000022300	Dcaf13	100	79.551	ENSKMAG00000002350	dcaf13	100	79.551	Kryptolebias_marmoratus
ENSMUSG00000022300	Dcaf13	100	79.101	ENSLBEG00000002441	dcaf13	100	79.101	Labrus_bergylta
ENSMUSG00000022300	Dcaf13	100	84.944	ENSLACG00000013358	DCAF13	100	84.944	Latimeria_chalumnae
ENSMUSG00000022300	Dcaf13	100	82.022	ENSLOCG00000009498	dcaf13	100	82.022	Lepisosteus_oculatus
ENSMUSG00000022300	Dcaf13	100	93.483	ENSLAFG00000009807	DCAF13	100	93.483	Loxodonta_africana
ENSMUSG00000022300	Dcaf13	100	90.787	ENSMFAG00000043378	-	100	90.787	Macaca_fascicularis
ENSMUSG00000022300	Dcaf13	100	93.933	ENSMFAG00000008982	-	77	93.933	Macaca_fascicularis
ENSMUSG00000022300	Dcaf13	80	93.277	ENSMMUG00000019405	-	70	93.277	Macaca_mulatta
ENSMUSG00000022300	Dcaf13	100	93.708	ENSMMUG00000019594	-	100	93.708	Macaca_mulatta
ENSMUSG00000022300	Dcaf13	100	91.011	ENSMNEG00000035898	-	100	91.011	Macaca_nemestrina
ENSMUSG00000022300	Dcaf13	100	82.921	ENSMNEG00000033963	-	75	82.921	Macaca_nemestrina
ENSMUSG00000022300	Dcaf13	100	65.169	ENSMNEG00000030562	-	96	65.169	Macaca_nemestrina
ENSMUSG00000022300	Dcaf13	100	67.865	ENSMLEG00000039177	-	100	67.865	Mandrillus_leucophaeus
ENSMUSG00000022300	Dcaf13	100	94.157	ENSMLEG00000041996	DCAF13	100	94.157	Mandrillus_leucophaeus
ENSMUSG00000022300	Dcaf13	100	78.427	ENSMAMG00000003196	dcaf13	100	78.427	Mastacembelus_armatus
ENSMUSG00000022300	Dcaf13	100	78.427	ENSMZEG00005012249	dcaf13	90	78.427	Maylandia_zebra
ENSMUSG00000022300	Dcaf13	95	87.441	ENSMGAG00000012340	DCAF13	99	87.441	Meleagris_gallopavo
ENSMUSG00000022300	Dcaf13	100	84.270	ENSMAUG00000017580	Dcaf13	100	84.270	Mesocricetus_auratus
ENSMUSG00000022300	Dcaf13	98	93.563	ENSMICG00000006907	DCAF13	100	93.483	Microcebus_murinus
ENSMUSG00000022300	Dcaf13	100	94.831	ENSMOCG00000011609	Dcaf13	100	94.831	Microtus_ochrogaster
ENSMUSG00000022300	Dcaf13	100	78.876	ENSMMOG00000017905	dcaf13	100	78.876	Mola_mola
ENSMUSG00000022300	Dcaf13	100	87.191	ENSMODG00000005549	DCAF13	100	87.191	Monodelphis_domestica
ENSMUSG00000022300	Dcaf13	100	78.427	ENSMALG00000007415	dcaf13	100	78.427	Monopterus_albus
ENSMUSG00000022300	Dcaf13	100	99.101	MGP_CAROLIEiJ_G0019757	Dcaf13	100	99.101	Mus_caroli
ENSMUSG00000022300	Dcaf13	100	99.101	MGP_PahariEiJ_G0019766	Dcaf13	100	99.101	Mus_pahari
ENSMUSG00000022300	Dcaf13	100	99.775	MGP_SPRETEiJ_G0020654	Dcaf13	100	99.775	Mus_spretus
ENSMUSG00000022300	Dcaf13	91	84.158	ENSMPUG00000004976	-	98	84.158	Mustela_putorius_furo
ENSMUSG00000022300	Dcaf13	98	94.253	ENSMLUG00000007375	DCAF13	100	94.157	Myotis_lucifugus
ENSMUSG00000022300	Dcaf13	100	96.180	ENSNGAG00000021670	Dcaf13	100	96.180	Nannospalax_galili
ENSMUSG00000022300	Dcaf13	100	78.652	ENSNBRG00000007078	dcaf13	100	78.652	Neolamprologus_brichardi
ENSMUSG00000022300	Dcaf13	100	68.315	ENSNLEG00000032043	-	100	68.315	Nomascus_leucogenys
ENSMUSG00000022300	Dcaf13	98	93.793	ENSNLEG00000003791	DCAF13	75	93.708	Nomascus_leucogenys
ENSMUSG00000022300	Dcaf13	76	88.571	ENSMEUG00000014697	-	80	88.571	Notamacropus_eugenii
ENSMUSG00000022300	Dcaf13	100	91.910	ENSODEG00000000870	DCAF13	100	91.910	Octodon_degus
ENSMUSG00000022300	Dcaf13	100	78.202	ENSONIG00000000142	dcaf13	100	78.202	Oreochromis_niloticus
ENSMUSG00000022300	Dcaf13	100	94.607	ENSOCUG00000009197	DCAF13	100	94.607	Oryctolagus_cuniculus
ENSMUSG00000022300	Dcaf13	100	80.000	ENSORLG00000002363	dcaf13	100	80.000	Oryzias_latipes
ENSMUSG00000022300	Dcaf13	100	80.000	ENSORLG00020001143	dcaf13	100	80.000	Oryzias_latipes_hni
ENSMUSG00000022300	Dcaf13	100	79.551	ENSORLG00015015911	dcaf13	100	79.551	Oryzias_latipes_hsok
ENSMUSG00000022300	Dcaf13	100	80.899	ENSOMEG00000006040	dcaf13	100	80.899	Oryzias_melastigma
ENSMUSG00000022300	Dcaf13	98	93.563	ENSOGAG00000002277	DCAF13	100	93.483	Otolemur_garnettii
ENSMUSG00000022300	Dcaf13	100	92.135	ENSOARG00000016227	DCAF13	100	92.135	Ovis_aries
ENSMUSG00000022300	Dcaf13	98	93.333	ENSPPAG00000029408	DCAF13	75	93.258	Pan_paniscus
ENSMUSG00000022300	Dcaf13	100	94.382	ENSPPRG00000005766	DCAF13	100	94.382	Panthera_pardus
ENSMUSG00000022300	Dcaf13	100	94.831	ENSPTIG00000016790	DCAF13	100	94.831	Panthera_tigris_altaica
ENSMUSG00000022300	Dcaf13	98	93.563	ENSPTRG00000020493	DCAF13	75	93.483	Pan_troglodytes
ENSMUSG00000022300	Dcaf13	100	91.236	ENSPANG00000026479	-	100	91.236	Papio_anubis
ENSMUSG00000022300	Dcaf13	100	94.157	ENSPANG00000010643	-	77	94.157	Papio_anubis
ENSMUSG00000022300	Dcaf13	100	76.854	ENSPKIG00000017471	dcaf13	100	76.854	Paramormyrops_kingsleyae
ENSMUSG00000022300	Dcaf13	100	82.472	ENSPSIG00000016768	DCAF13	100	82.472	Pelodiscus_sinensis
ENSMUSG00000022300	Dcaf13	100	75.506	ENSPMGG00000022144	dcaf13	100	75.506	Periophthalmus_magnuspinnatus
ENSMUSG00000022300	Dcaf13	100	96.180	ENSPEMG00000011958	Dcaf13	100	96.180	Peromyscus_maniculatus_bairdii
ENSMUSG00000022300	Dcaf13	100	87.416	ENSPCIG00000026186	DCAF13	100	87.416	Phascolarctos_cinereus
ENSMUSG00000022300	Dcaf13	100	79.101	ENSPFOG00000019444	dcaf13	100	79.101	Poecilia_formosa
ENSMUSG00000022300	Dcaf13	100	79.101	ENSPLAG00000015924	dcaf13	100	79.101	Poecilia_latipinna
ENSMUSG00000022300	Dcaf13	100	79.101	ENSPMEG00000004022	dcaf13	100	79.101	Poecilia_mexicana
ENSMUSG00000022300	Dcaf13	100	79.101	ENSPREG00000016063	dcaf13	100	79.101	Poecilia_reticulata
ENSMUSG00000022300	Dcaf13	98	94.253	ENSPPYG00000018809	-	100	94.157	Pongo_abelii
ENSMUSG00000022300	Dcaf13	98	88.276	ENSPCAG00000007620	DCAF13	75	88.315	Procavia_capensis
ENSMUSG00000022300	Dcaf13	97	89.327	ENSPCOG00000028064	-	100	89.342	Propithecus_coquereli
ENSMUSG00000022300	Dcaf13	100	94.382	ENSPVAG00000017178	DCAF13	76	94.382	Pteropus_vampyrus
ENSMUSG00000022300	Dcaf13	100	78.652	ENSPNYG00000003861	dcaf13	100	78.652	Pundamilia_nyererei
ENSMUSG00000022300	Dcaf13	100	76.404	ENSPNAG00000010091	dcaf13	100	76.404	Pygocentrus_nattereri
ENSMUSG00000022300	Dcaf13	100	97.079	ENSRNOG00000004301	Dcaf13	100	97.079	Rattus_norvegicus
ENSMUSG00000022300	Dcaf13	100	93.933	ENSRBIG00000032300	DCAF13	85	93.933	Rhinopithecus_bieti
ENSMUSG00000022300	Dcaf13	99	66.667	ENSRROG00000032221	-	100	66.667	Rhinopithecus_roxellana
ENSMUSG00000022300	Dcaf13	100	93.708	ENSRROG00000040442	DCAF13	100	93.708	Rhinopithecus_roxellana
ENSMUSG00000022300	Dcaf13	99	46.253	YLL011W	-	95	46.253	Saccharomyces_cerevisiae
ENSMUSG00000022300	Dcaf13	100	93.483	ENSSBOG00000025597	DCAF13	100	93.483	Saimiri_boliviensis_boliviensis
ENSMUSG00000022300	Dcaf13	100	87.191	ENSSHAG00000006588	DCAF13	100	87.191	Sarcophilus_harrisii
ENSMUSG00000022300	Dcaf13	99	78.604	ENSSFOG00015006138	dcaf13	99	78.604	Scleropages_formosus
ENSMUSG00000022300	Dcaf13	100	78.876	ENSSMAG00000009568	dcaf13	100	78.876	Scophthalmus_maximus
ENSMUSG00000022300	Dcaf13	100	78.202	ENSSLDG00000010517	dcaf13	100	78.202	Seriola_lalandi_dorsalis
ENSMUSG00000022300	Dcaf13	100	84.494	ENSSPUG00000009148	DCAF13	100	84.494	Sphenodon_punctatus
ENSMUSG00000022300	Dcaf13	100	78.652	ENSSPAG00000019890	dcaf13	100	78.652	Stegastes_partitus
ENSMUSG00000022300	Dcaf13	100	91.236	ENSSSCG00000006048	DCAF13	100	91.236	Sus_scrofa
ENSMUSG00000022300	Dcaf13	95	88.152	ENSTGUG00000012152	DCAF13	100	88.152	Taeniopygia_guttata
ENSMUSG00000022300	Dcaf13	100	78.876	ENSTRUG00000007438	dcaf13	100	78.876	Takifugu_rubripes
ENSMUSG00000022300	Dcaf13	94	77.938	ENSTNIG00000008215	dcaf13	84	77.938	Tetraodon_nigroviridis
ENSMUSG00000022300	Dcaf13	51	92.920	ENSTBEG00000015812	-	50	92.920	Tupaia_belangeri
ENSMUSG00000022300	Dcaf13	98	82.989	ENSTTRG00000014906	DCAF13	75	82.921	Tursiops_truncatus
ENSMUSG00000022300	Dcaf13	100	94.157	ENSUAMG00000017931	DCAF13	100	94.157	Ursus_americanus
ENSMUSG00000022300	Dcaf13	99	86.682	ENSUMAG00000019830	DCAF13	76	86.682	Ursus_maritimus
ENSMUSG00000022300	Dcaf13	100	93.933	ENSVPAG00000006725	DCAF13	76	93.933	Vicugna_pacos
ENSMUSG00000022300	Dcaf13	94	95.444	ENSVVUG00000016884	DCAF13	89	95.444	Vulpes_vulpes
ENSMUSG00000022300	Dcaf13	82	80.220	ENSXETG00000004092	dcaf13	100	80.220	Xenopus_tropicalis
ENSMUSG00000022300	Dcaf13	100	74.157	ENSXCOG00000017005	dcaf13	100	74.157	Xiphophorus_couchianus
ENSMUSG00000022300	Dcaf13	100	79.551	ENSXMAG00000026809	dcaf13	100	79.551	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005813	centrosome	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0030054	cell junction	-	ISO	Component
GO:0030331	estrogen receptor binding	-	ISO	Function
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0080008	Cul4-RING E3 ubiquitin ligase complex	21873635.	IBA	Component
GO:0080008	Cul4-RING E3 ubiquitin ligase complex	-	ISO	Component