EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000022313 (Gene tree)
Gene ID
78581
Gene Symbol
Utp23
Alias
1700010I21Rik|D530033C11Rik
Full Name
UTP23 small subunit processome component
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
7186 bases
Position
chr15:51877429-51884614
Accession
1925831
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000119261Fcf1PF04900.121.7e-2811
ENSMUSP00000124832Fcf1PF04900.122.8e-0911
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000137116-2921-ENSMUSP00000119261249 (aa)-Q9CX11
ENSMUST00000161651-582-ENSMUSP00000124157120 (aa)-E0CYI7
ENSMUST00000059599-740-ENSMUSP0000005060368 (aa)-G3X989
ENSMUST00000136129-779-ENSMUSP00000124832143 (aa)-G3XA22
Gene Model
Click here to download ENSMUSG00000022313's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022313's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000022313Utp2310087.149ENSG00000147679UTP239098.387Homo_sapiens
ENSMUSG00000022313Utp238460.766ENSAPOG00000004620utp238360.766Acanthochromis_polyacanthus
ENSMUSG00000022313Utp237254.369ENSAPOG00000013233UTP236258.904Acanthochromis_polyacanthus
ENSMUSG00000022313Utp237254.369ENSAPOG00000004608-6958.904Acanthochromis_polyacanthus
ENSMUSG00000022313Utp239989.837ENSAMEG00000010317UTP239989.837Ailuropoda_melanoleuca
ENSMUSG00000022313Utp238462.201ENSACIG00000013638utp237962.201Amphilophus_citrinellus
ENSMUSG00000022313Utp238462.201ENSAOCG00000016307utp238362.201Amphiprion_ocellaris
ENSMUSG00000022313Utp238462.201ENSAPEG00000018976utp238362.201Amphiprion_percula
ENSMUSG00000022313Utp238862.844ENSATEG00000007509utp238262.679Anabas_testudineus
ENSMUSG00000022313Utp238468.900ENSACAG00000011061UTP238268.900Anolis_carolinensis
ENSMUSG00000022313Utp2310086.345ENSANAG00000036252-9686.345Aotus_nancymaae
ENSMUSG00000022313Utp2310087.149ENSANAG00000025273-9987.149Aotus_nancymaae
ENSMUSG00000022313Utp239457.021ENSAMXG00000020989utp238258.373Astyanax_mexicanus
ENSMUSG00000022313Utp2310087.550ENSBTAG00000040422UTP2310087.550Bos_taurus
ENSMUSG00000022313Utp238639.908WBGene00016411C34E10.108439.810Caenorhabditis_elegans
ENSMUSG00000022313Utp2310087.550ENSCJAG00000005903UTP239987.550Callithrix_jacchus
ENSMUSG00000022313Utp239989.113ENSCAFG00000000821UTP2310089.113Canis_familiaris
ENSMUSG00000022313Utp239989.113ENSCAFG00020004174UTP2310089.113Canis_lupus_dingo
ENSMUSG00000022313Utp2310087.952ENSCHIG00000019828UTP2310087.952Capra_hircus
ENSMUSG00000022313Utp2310086.345ENSTSYG00000001644UTP2310086.345Carlito_syrichta
ENSMUSG00000022313Utp2310083.665ENSCPOG00000034561UTP239383.665Cavia_porcellus
ENSMUSG00000022313Utp2310087.149ENSCCAG00000030228UTP239987.149Cebus_capucinus
ENSMUSG00000022313Utp2310087.550ENSCATG00000035129UTP239987.550Cercocebus_atys
ENSMUSG00000022313Utp239089.732ENSCLAG00000005108-9089.732Chinchilla_lanigera
ENSMUSG00000022313Utp239281.140ENSCLAG00000000531-9880.804Chinchilla_lanigera
ENSMUSG00000022313Utp2310086.747ENSCSAG00000010933UTP239986.747Chlorocebus_sabaeus
ENSMUSG00000022313Utp239988.353ENSCHOG00000003145UTP239988.353Choloepus_hoffmanni
ENSMUSG00000022313Utp238972.973ENSCPBG00000001634UTP238972.646Chrysemys_picta_bellii
ENSMUSG00000022313Utp238446.411ENSCING00000012577-9446.411Ciona_intestinalis
ENSMUSG00000022313Utp238445.933ENSCSAVG00000003273-9545.455Ciona_savignyi
ENSMUSG00000022313Utp239986.640ENSCANG00000028461UTP239286.640Colobus_angolensis_palliatus
ENSMUSG00000022313Utp2310091.566ENSCGRG00001005218Utp2310091.566Cricetulus_griseus_chok1gshd
ENSMUSG00000022313Utp238665.116ENSCSEG00000011409utp238164.593Cynoglossus_semilaevis
ENSMUSG00000022313Utp239058.036ENSCVAG00000003180utp238758.036Cyprinodon_variegatus
ENSMUSG00000022313Utp238459.809ENSDARG00000105012utp238159.330Danio_rerio
ENSMUSG00000022313Utp239987.449ENSDNOG00000033602UTP239887.449Dasypus_novemcinctus
ENSMUSG00000022313Utp2310077.108ENSDORG00000029054-9277.108Dipodomys_ordii
ENSMUSG00000022313Utp2310081.818ENSDORG00000005950-9981.818Dipodomys_ordii
ENSMUSG00000022313Utp239737.551FBgn0031361CG176528339.423Drosophila_melanogaster
ENSMUSG00000022313Utp2310084.400ENSETEG00000015401-9980.321Echinops_telfairi
ENSMUSG00000022313Utp2310058.730ENSETEG00000017109-9956.972Echinops_telfairi
ENSMUSG00000022313Utp238652.804ENSEBUG00000009876utp239051.675Eptatretus_burgeri
ENSMUSG00000022313Utp2310085.542ENSEASG00005023141UTP2310085.542Equus_asinus_asinus
ENSMUSG00000022313Utp2310086.345ENSECAG00000026844UTP2310086.345Equus_caballus
ENSMUSG00000022313Utp2310087.550ENSEEUG00000004503UTP239987.550Erinaceus_europaeus
ENSMUSG00000022313Utp235130.159ENSEEUG00000007173FCF16830.159Erinaceus_europaeus
ENSMUSG00000022313Utp238460.287ENSELUG00000005602utp238360.287Esox_lucius
ENSMUSG00000022313Utp239989.113ENSFCAG00000036051UTP2310089.113Felis_catus
ENSMUSG00000022313Utp239067.556ENSFALG00000002299UTP239067.556Ficedula_albicollis
ENSMUSG00000022313Utp2310086.853ENSFDAG00000021034UTP2310087.251Fukomys_damarensis
ENSMUSG00000022313Utp238861.927ENSFHEG00000008581utp238661.009Fundulus_heteroclitus
ENSMUSG00000022313Utp239456.838ENSGMOG00000015495utp238759.809Gadus_morhua
ENSMUSG00000022313Utp238968.018ENSGALG00000032400UTP239067.411Gallus_gallus
ENSMUSG00000022313Utp238460.766ENSGAFG00000002063utp238060.766Gambusia_affinis
ENSMUSG00000022313Utp239057.778ENSGACG00000002979utp239058.036Gasterosteus_aculeatus
ENSMUSG00000022313Utp235130.159ENSGAGG00000005074FCF16330.159Gopherus_agassizii
ENSMUSG00000022313Utp2310086.747ENSGGOG00000013203UTP239986.747Gorilla_gorilla
ENSMUSG00000022313Utp238862.844ENSHBUG00000023376utp238262.679Haplochromis_burtoni
ENSMUSG00000022313Utp239084.821ENSHGLG00000020901-9382.072Heterocephalus_glaber_female
ENSMUSG00000022313Utp238383.051ENSHGLG00000017539-8583.051Heterocephalus_glaber_female
ENSMUSG00000022313Utp239089.286ENSHGLG00000004025UTP2310086.056Heterocephalus_glaber_female
ENSMUSG00000022313Utp2310074.502ENSHGLG00000008717-8977.679Heterocephalus_glaber_female
ENSMUSG00000022313Utp238279.512ENSHGLG00100012817-9379.904Heterocephalus_glaber_male
ENSMUSG00000022313Utp238383.051ENSHGLG00100011465-8583.051Heterocephalus_glaber_male
ENSMUSG00000022313Utp239089.286ENSHGLG00100018875UTP2310086.056Heterocephalus_glaber_male
ENSMUSG00000022313Utp237660.847ENSHCOG00000007006utp238460.287Hippocampus_comes
ENSMUSG00000022313Utp238959.729ENSIPUG00000014437utp238260.287Ictalurus_punctatus
ENSMUSG00000022313Utp2310088.755ENSSTOG00000001411UTP2310088.755Ictidomys_tridecemlineatus
ENSMUSG00000022313Utp239954.724ENSKMAG00000002262utp238259.330Kryptolebias_marmoratus
ENSMUSG00000022313Utp239457.438ENSLBEG00000012819utp238159.524Labrus_bergylta
ENSMUSG00000022313Utp239166.079ENSLACG00000014611UTP238966.071Latimeria_chalumnae
ENSMUSG00000022313Utp239662.500ENSLOCG00000003289utp238864.732Lepisosteus_oculatus
ENSMUSG00000022313Utp2310088.400ENSLAFG00000001282UTP2310088.400Loxodonta_africana
ENSMUSG00000022313Utp2310087.149ENSMFAG00000003374UTP239987.149Macaca_fascicularis
ENSMUSG00000022313Utp2310086.747ENSMMUG00000020284UTP239986.747Macaca_mulatta
ENSMUSG00000022313Utp2310087.149ENSMNEG00000028668UTP239987.149Macaca_nemestrina
ENSMUSG00000022313Utp2310086.747ENSMLEG00000032668UTP239386.747Mandrillus_leucophaeus
ENSMUSG00000022313Utp239958.065ENSMAMG00000003259utp238360.766Mastacembelus_armatus
ENSMUSG00000022313Utp238862.844ENSMZEG00005026398utp238262.679Maylandia_zebra
ENSMUSG00000022313Utp238968.018ENSMGAG00000012472UTP239067.411Meleagris_gallopavo
ENSMUSG00000022313Utp239990.845ENSMAUG00000017455Utp239990.845Mesocricetus_auratus
ENSMUSG00000022313Utp239989.113ENSMICG00000034720UTP2310089.113Microcebus_murinus
ENSMUSG00000022313Utp239058.929ENSMMOG00000014498utp238461.722Mola_mola
ENSMUSG00000022313Utp238782.028ENSMODG00000004140UTP238682.028Monodelphis_domestica
ENSMUSG00000022313Utp239958.704ENSMALG00000010867utp238562.679Monopterus_albus
ENSMUSG00000022313Utp2310097.590MGP_CAROLIEiJ_G0019781Utp2310097.590Mus_caroli
ENSMUSG00000022313Utp2310099.197MGP_SPRETEiJ_G0020678Utp239799.197Mus_spretus
ENSMUSG00000022313Utp239888.163ENSMPUG00000000987UTP239987.805Mustela_putorius_furo
ENSMUSG00000022313Utp2310086.747ENSMLUG00000004345UTP2310086.747Myotis_lucifugus
ENSMUSG00000022313Utp238863.303ENSNBRG00000012946utp238263.158Neolamprologus_brichardi
ENSMUSG00000022313Utp2310087.149ENSNLEG00000032995UTP239287.149Nomascus_leucogenys
ENSMUSG00000022313Utp239079.372ENSMEUG00000001566UTP239680.000Notamacropus_eugenii
ENSMUSG00000022313Utp2310081.928ENSOPRG00000011227UTP239981.928Ochotona_princeps
ENSMUSG00000022313Utp2310081.673ENSODEG00000018881-10081.275Octodon_degus
ENSMUSG00000022313Utp235130.159ENSODEG00000018964-6330.159Octodon_degus
ENSMUSG00000022313Utp235130.159ENSODEG00000019416-6330.159Octodon_degus
ENSMUSG00000022313Utp237855.357ENSONIG00000013525utp238062.733Oreochromis_niloticus
ENSMUSG00000022313Utp2310061.224ENSOANG00000004878UTP238760.377Ornithorhynchus_anatinus
ENSMUSG00000022313Utp2310086.747ENSOCUG00000007541UTP239986.747Oryctolagus_cuniculus
ENSMUSG00000022313Utp239456.962ENSORLG00000001784utp238258.852Oryzias_latipes
ENSMUSG00000022313Utp239457.806ENSORLG00020009731utp238259.330Oryzias_latipes_hni
ENSMUSG00000022313Utp239457.806ENSORLG00015016970utp238259.809Oryzias_latipes_hsok
ENSMUSG00000022313Utp238859.633ENSOMEG00000008767utp238259.330Oryzias_melastigma
ENSMUSG00000022313Utp239986.290ENSOGAG00000017024UTP2310086.290Otolemur_garnettii
ENSMUSG00000022313Utp239975.352ENSOGAG00000033060-10074.648Otolemur_garnettii
ENSMUSG00000022313Utp2310087.952ENSOARG00000010483UTP2310087.952Ovis_aries
ENSMUSG00000022313Utp2310086.747ENSPPAG00000028660UTP239986.747Pan_paniscus
ENSMUSG00000022313Utp239989.113ENSPPRG00000024902UTP2310089.113Panthera_pardus
ENSMUSG00000022313Utp239989.113ENSPTIG00000019925UTP2310089.113Panthera_tigris_altaica
ENSMUSG00000022313Utp2310086.747ENSPTRG00000020521UTP239286.747Pan_troglodytes
ENSMUSG00000022313Utp2310086.747ENSPANG00000011559UTP239986.747Papio_anubis
ENSMUSG00000022313Utp239661.925ENSPKIG00000018790utp238863.636Paramormyrops_kingsleyae
ENSMUSG00000022313Utp239071.749ENSPSIG00000013132UTP238971.749Pelodiscus_sinensis
ENSMUSG00000022313Utp239057.589ENSPMGG00000019770utp238957.589Periophthalmus_magnuspinnatus
ENSMUSG00000022313Utp239078.924ENSPCIG00000018598UTP238678.924Phascolarctos_cinereus
ENSMUSG00000022313Utp238860.000ENSPFOG00000003590utp238260.287Poecilia_formosa
ENSMUSG00000022313Utp238860.550ENSPLAG00000017925utp238260.287Poecilia_latipinna
ENSMUSG00000022313Utp238860.550ENSPMEG00000006728utp238260.287Poecilia_mexicana
ENSMUSG00000022313Utp238460.287ENSPREG00000002478utp238260.287Poecilia_reticulata
ENSMUSG00000022313Utp2310087.149ENSPPYG00000018831UTP239987.149Pongo_abelii
ENSMUSG00000022313Utp239985.141ENSPCAG00000009093UTP239985.141Procavia_capensis
ENSMUSG00000022313Utp239984.507ENSPCOG00000015084-10084.507Propithecus_coquereli
ENSMUSG00000022313Utp2310087.952ENSPVAG00000002661UTP239987.952Pteropus_vampyrus
ENSMUSG00000022313Utp238862.385ENSPNYG00000017636utp238262.201Pundamilia_nyererei
ENSMUSG00000022313Utp238259.512ENSPNAG00000024538utp238660.287Pygocentrus_nattereri
ENSMUSG00000022313Utp2310093.625ENSRNOG00000004387Utp2310094.422Rattus_norvegicus
ENSMUSG00000022313Utp2310087.149ENSRBIG00000026267UTP239987.149Rhinopithecus_bieti
ENSMUSG00000022313Utp2310087.149ENSRROG00000028593UTP239987.149Rhinopithecus_roxellana
ENSMUSG00000022313Utp239230.472YOR004W-7130.055Saccharomyces_cerevisiae
ENSMUSG00000022313Utp2310086.345ENSSBOG00000018914UTP239986.345Saimiri_boliviensis_boliviensis
ENSMUSG00000022313Utp237869.643ENSSHAG00000015399UTP238073.248Sarcophilus_harrisii
ENSMUSG00000022313Utp238662.617ENSSFOG00015009226utp239161.722Scleropages_formosus
ENSMUSG00000022313Utp239461.345ENSSMAG00000020390utp238264.115Scophthalmus_maximus
ENSMUSG00000022313Utp239460.851ENSSDUG00000020272utp238762.679Seriola_dumerili
ENSMUSG00000022313Utp239461.017ENSSLDG00000000393utp238762.679Seriola_lalandi_dorsalis
ENSMUSG00000022313Utp238772.685ENSSPUG00000011572UTP238772.685Sphenodon_punctatus
ENSMUSG00000022313Utp238461.244ENSSPAG00000013890utp238461.244Stegastes_partitus
ENSMUSG00000022313Utp2310086.905ENSSSCG00000030493UTP2310086.905Sus_scrofa
ENSMUSG00000022313Utp239066.222ENSTGUG00000012316-9066.222Taeniopygia_guttata
ENSMUSG00000022313Utp239064.444ENSTGUG00000015403-9564.444Taeniopygia_guttata
ENSMUSG00000022313Utp2310054.545ENSTRUG00000023365utp238259.809Takifugu_rubripes
ENSMUSG00000022313Utp2310085.141ENSTBEG00000008655UTP239985.141Tupaia_belangeri
ENSMUSG00000022313Utp2310086.345ENSTTRG00000015295UTP2310086.345Tursiops_truncatus
ENSMUSG00000022313Utp239890.204ENSUMAG00000020439UTP239989.837Ursus_maritimus
ENSMUSG00000022313Utp2310087.952ENSVPAG00000009358UTP2310087.952Vicugna_pacos
ENSMUSG00000022313Utp239989.113ENSVVUG00000015307UTP2310089.113Vulpes_vulpes
ENSMUSG00000022313Utp238467.464ENSXETG00000020781utp239066.816Xenopus_tropicalis
ENSMUSG00000022313Utp235130.159ENSXETG00000027288fcf16330.159Xenopus_tropicalis
ENSMUSG00000022313Utp238459.809ENSXCOG00000019504utp238259.809Xiphophorus_couchianus
ENSMUSG00000022313Utp238459.809ENSXMAG00000014058utp238259.809Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000480endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)25190460.IMPProcess
GO:0003730mRNA 3'-UTR binding-ISOFunction
GO:0005634nucleus-IEAComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0006364rRNA processing-IEAProcess
GO:0032040small-subunit processome21873635.IBAComponent
GO:0042254ribosome biogenesis-IEAProcess
GO:0048027mRNA 5'-UTR binding-ISOFunction
GO:0070181small ribosomal subunit rRNA binding21873635.IBAFunction

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