EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000022927	-	3956	XM_006520644	ENSMUSP00000022927	635 (aa)	XP_006520707	Q61550
ENSMUST00000226529	-	788	-	ENSMUSP00000154815	160 (aa)	-	A0A2I3BS25

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu04110	Cell cycle	KEGG

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000775	chromosome, centromeric region	-	IEA	Component
GO:0000785	chromatin	23920377.	IDA	Component
GO:0000794	condensed nuclear chromosome	24797475.	IDA	Component
GO:0003682	chromatin binding	21873635.	IBA	Function
GO:0005515	protein binding	10375619.22075476.	IPI	Function
GO:0005634	nucleus	10375619.	IDA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006281	DNA repair	-	IEA	Process
GO:0006302	double-strand break repair	21873635.	IBA	Process
GO:0006357	regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0006915	apoptotic process	-	IEA	Process
GO:0006974	cellular response to DNA damage stimulus	-	IEA	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0007059	chromosome segregation	-	IEA	Process
GO:0007062	sister chromatid cohesion	21873635.	IBA	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0008278	cohesin complex	10375619.22419665.	IDA	Component
GO:0008278	cohesin complex	-	ISO	Component
GO:0010972	negative regulation of G2/M transition of mitotic cell cycle	10375619.	IMP	Process
GO:0016363	nuclear matrix	-	ISO	Component
GO:0030893	meiotic cohesin complex	21873635.	IBA	Component
GO:0045841	negative regulation of mitotic metaphase/anaphase transition	10375619.	IMP	Process
GO:0045876	positive regulation of sister chromatid cohesion	-	ISO	Process
GO:0051301	cell division	-	IEA	Process
GO:0051321	meiotic cell cycle	21873635.	IBA	Process
GO:0071168	protein localization to chromatin	-	ISO	Process