EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022325 (Gene tree)
Gene ID: 67724
Gene Symbol: Pop1
Alias: 4932434G09Rik
Full Name: processing of precursor 1%2C ribonuclease P/MRP family%2C (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 35345 bases
Position: chr15:34495304-34530648
Accession: 1914974
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000078037	POP1	PF06978.11	1.6e-38	1	2
ENSMUSP00000078037	POP1	PF06978.11	1.6e-38	2	2
ENSMUSP00000052654	POP1	PF06978.11	1.8e-38	1	2
ENSMUSP00000052654	POP1	PF06978.11	1.8e-38	2	2
ENSMUSP00000078037	POPLD	PF08170.12	1.3e-26	1	1
ENSMUSP00000052654	POPLD	PF08170.12	1.4e-26	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000153061	-	522	-	-	- (aa)	-	-
ENSMUST00000155073	-	470	-	-	- (aa)	-	-
ENSMUST00000079028	-	3275	-	ENSMUSP00000078037	1015 (aa)	-	Q9D4G5
ENSMUST00000126223	-	392	-	-	- (aa)	-	-
ENSMUST00000132427	-	794	-	-	- (aa)	-	-
ENSMUST00000052290	-	3395	-	ENSMUSP00000052654	1045 (aa)	-	Q8K205

Gene Model

Click here to download ENSMUSG00000022325's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022325	Pop1	100	77.246	ENSG00000104356	POP1	100	85.792	Homo_sapiens
ENSMUSG00000022325	Pop1	100	46.103	ENSAPOG00000008198	pop1	100	45.913	Acanthochromis_polyacanthus
ENSMUSG00000022325	Pop1	100	72.075	ENSAMEG00000000556	POP1	100	72.075	Ailuropoda_melanoleuca
ENSMUSG00000022325	Pop1	100	46.058	ENSACIG00000004169	POP1	100	45.865	Amphilophus_citrinellus
ENSMUSG00000022325	Pop1	100	45.592	ENSAOCG00000010991	pop1	100	45.472	Amphiprion_ocellaris
ENSMUSG00000022325	Pop1	94	44.433	ENSAPEG00000007607	pop1	99	44.810	Amphiprion_percula
ENSMUSG00000022325	Pop1	100	45.042	ENSATEG00000024814	POP1	100	45.118	Anabas_testudineus
ENSMUSG00000022325	Pop1	92	59.597	ENSAPLG00000014418	POP1	99	59.345	Anas_platyrhynchos
ENSMUSG00000022325	Pop1	99	54.154	ENSACAG00000016083	POP1	100	54.388	Anolis_carolinensis
ENSMUSG00000022325	Pop1	90	84.483	ENSANAG00000026360	POP1	100	84.483	Aotus_nancymaae
ENSMUSG00000022325	Pop1	100	46.629	ENSACLG00000010951	pop1	100	47.009	Astatotilapia_calliptera
ENSMUSG00000022325	Pop1	100	45.102	ENSAMXG00000014483	POP1	100	44.455	Astyanax_mexicanus
ENSMUSG00000022325	Pop1	100	72.923	ENSBTAG00000012596	POP1	100	72.923	Bos_taurus
ENSMUSG00000022325	Pop1	100	76.270	ENSCJAG00000015567	POP1	100	76.270	Callithrix_jacchus
ENSMUSG00000022325	Pop1	100	73.111	ENSCAFG00000000469	POP1	100	73.111	Canis_familiaris
ENSMUSG00000022325	Pop1	100	73.535	ENSCAFG00020026765	POP1	100	73.535	Canis_lupus_dingo
ENSMUSG00000022325	Pop1	100	72.282	ENSCHIG00000017066	POP1	100	72.407	Capra_hircus
ENSMUSG00000022325	Pop1	100	75.879	ENSTSYG00000003097	POP1	100	75.879	Carlito_syrichta
ENSMUSG00000022325	Pop1	100	72.320	ENSCAPG00000007251	POP1	100	71.957	Cavia_aperea
ENSMUSG00000022325	Pop1	100	74.633	ENSCPOG00000002901	POP1	100	74.266	Cavia_porcellus
ENSMUSG00000022325	Pop1	100	76.172	ENSCCAG00000018939	POP1	100	76.172	Cebus_capucinus
ENSMUSG00000022325	Pop1	100	76.758	ENSCATG00000040916	POP1	100	76.758	Cercocebus_atys
ENSMUSG00000022325	Pop1	100	76.983	ENSCLAG00000007208	POP1	97	76.983	Chinchilla_lanigera
ENSMUSG00000022325	Pop1	90	76.681	ENSCSAG00000012340	POP1	99	76.681	Chlorocebus_sabaeus
ENSMUSG00000022325	Pop1	88	81.395	ENSCHOG00000011432	POP1	96	81.395	Choloepus_hoffmanni
ENSMUSG00000022325	Pop1	100	61.441	ENSCPBG00000006373	POP1	100	61.928	Chrysemys_picta_bellii
ENSMUSG00000022325	Pop1	100	76.758	ENSCANG00000001647	POP1	100	76.758	Colobus_angolensis_palliatus
ENSMUSG00000022325	Pop1	100	84.350	ENSCGRG00001017308	Pop1	100	84.350	Cricetulus_griseus_chok1gshd
ENSMUSG00000022325	Pop1	100	78.150	ENSCGRG00000010824	Pop1	100	78.150	Cricetulus_griseus_crigri
ENSMUSG00000022325	Pop1	100	43.905	ENSCSEG00000008737	POP1	100	43.714	Cynoglossus_semilaevis
ENSMUSG00000022325	Pop1	100	45.463	ENSCVAG00000022248	pop1	100	45.463	Cyprinodon_variegatus
ENSMUSG00000022325	Pop1	100	71.843	ENSDNOG00000019974	POP1	100	71.843	Dasypus_novemcinctus
ENSMUSG00000022325	Pop1	100	68.156	ENSDORG00000015384	Pop1	100	67.742	Dipodomys_ordii
ENSMUSG00000022325	Pop1	61	33.333	FBgn0026702	l(1)G0045	70	33.231	Drosophila_melanogaster
ENSMUSG00000022325	Pop1	89	68.596	ENSETEG00000007839	POP1	88	68.596	Echinops_telfairi
ENSMUSG00000022325	Pop1	100	75.488	ENSEASG00005003189	POP1	98	75.488	Equus_asinus_asinus
ENSMUSG00000022325	Pop1	100	75.391	ENSECAG00000024236	POP1	100	75.391	Equus_caballus
ENSMUSG00000022325	Pop1	67	66.740	ENSEEUG00000003050	-	70	66.740	Erinaceus_europaeus
ENSMUSG00000022325	Pop1	100	45.507	ENSELUG00000003526	pop1	100	46.050	Esox_lucius
ENSMUSG00000022325	Pop1	100	75.391	ENSFCAG00000002168	POP1	100	75.391	Felis_catus
ENSMUSG00000022325	Pop1	100	56.171	ENSFALG00000005711	POP1	100	56.074	Ficedula_albicollis
ENSMUSG00000022325	Pop1	100	76.298	ENSFDAG00000017068	POP1	100	76.298	Fukomys_damarensis
ENSMUSG00000022325	Pop1	100	45.115	ENSFHEG00000019518	pop1	100	45.359	Fundulus_heteroclitus
ENSMUSG00000022325	Pop1	92	44.995	ENSGMOG00000000659	POP1	97	45.201	Gadus_morhua
ENSMUSG00000022325	Pop1	100	44.638	ENSGAFG00000019770	POP1	100	44.638	Gambusia_affinis
ENSMUSG00000022325	Pop1	100	43.846	ENSGACG00000003499	pop1	100	43.846	Gasterosteus_aculeatus
ENSMUSG00000022325	Pop1	100	60.714	ENSGAGG00000011737	POP1	98	61.300	Gopherus_agassizii
ENSMUSG00000022325	Pop1	100	76.953	ENSGGOG00000003176	POP1	100	76.953	Gorilla_gorilla
ENSMUSG00000022325	Pop1	100	47.293	ENSHBUG00000021583	pop1	100	47.104	Haplochromis_burtoni
ENSMUSG00000022325	Pop1	100	75.855	ENSHGLG00000006029	POP1	100	75.855	Heterocephalus_glaber_female
ENSMUSG00000022325	Pop1	100	75.855	ENSHGLG00100016879	POP1	100	75.855	Heterocephalus_glaber_male
ENSMUSG00000022325	Pop1	90	47.831	ENSHCOG00000013888	pop1	96	47.170	Hippocampus_comes
ENSMUSG00000022325	Pop1	99	44.587	ENSIPUG00000018336	pop1	99	42.804	Ictalurus_punctatus
ENSMUSG00000022325	Pop1	100	77.669	ENSSTOG00000011455	POP1	97	77.669	Ictidomys_tridecemlineatus
ENSMUSG00000022325	Pop1	100	75.221	ENSJJAG00000013325	Pop1	100	75.221	Jaculus_jaculus
ENSMUSG00000022325	Pop1	100	44.562	ENSKMAG00000001346	POP1	100	44.562	Kryptolebias_marmoratus
ENSMUSG00000022325	Pop1	89	46.602	ENSLBEG00000024457	POP1	95	46.186	Labrus_bergylta
ENSMUSG00000022325	Pop1	93	55.657	ENSLACG00000012498	POP1	100	55.657	Latimeria_chalumnae
ENSMUSG00000022325	Pop1	100	50.436	ENSLOCG00000009817	POP1	100	50.630	Lepisosteus_oculatus
ENSMUSG00000022325	Pop1	100	75.389	ENSLAFG00000010770	POP1	100	75.389	Loxodonta_africana
ENSMUSG00000022325	Pop1	100	76.953	ENSMFAG00000000347	POP1	100	76.953	Macaca_fascicularis
ENSMUSG00000022325	Pop1	100	76.758	ENSMNEG00000036870	POP1	100	76.758	Macaca_nemestrina
ENSMUSG00000022325	Pop1	100	76.758	ENSMLEG00000034986	POP1	100	76.758	Mandrillus_leucophaeus
ENSMUSG00000022325	Pop1	100	44.697	ENSMAMG00000004040	pop1	100	45.213	Mastacembelus_armatus
ENSMUSG00000022325	Pop1	100	47.293	ENSMZEG00005025448	pop1	100	47.104	Maylandia_zebra
ENSMUSG00000022325	Pop1	100	56.632	ENSMGAG00000012167	POP1	100	57.089	Meleagris_gallopavo
ENSMUSG00000022325	Pop1	100	83.397	ENSMAUG00000017537	Pop1	100	83.095	Mesocricetus_auratus
ENSMUSG00000022325	Pop1	100	76.931	ENSMICG00000004361	POP1	100	76.931	Microcebus_murinus
ENSMUSG00000022325	Pop1	100	82.871	ENSMOCG00000006356	Pop1	100	83.349	Microtus_ochrogaster
ENSMUSG00000022325	Pop1	100	43.135	ENSMMOG00000018242	pop1	100	43.135	Mola_mola
ENSMUSG00000022325	Pop1	100	63.198	ENSMODG00000006561	POP1	100	63.138	Monodelphis_domestica
ENSMUSG00000022325	Pop1	100	46.059	ENSMALG00000012621	POP1	100	46.256	Monopterus_albus
ENSMUSG00000022325	Pop1	100	97.608	MGP_CAROLIEiJ_G0019726	Pop1	100	97.608	Mus_caroli
ENSMUSG00000022325	Pop1	100	94.581	MGP_PahariEiJ_G0019735	Pop1	100	94.581	Mus_pahari
ENSMUSG00000022325	Pop1	100	98.182	MGP_SPRETEiJ_G0020622	Pop1	100	98.182	Mus_spretus
ENSMUSG00000022325	Pop1	100	73.930	ENSMPUG00000015250	POP1	100	73.930	Mustela_putorius_furo
ENSMUSG00000022325	Pop1	100	70.760	ENSMLUG00000010204	POP1	100	70.760	Myotis_lucifugus
ENSMUSG00000022325	Pop1	100	82.336	ENSNGAG00000001582	Pop1	100	82.336	Nannospalax_galili
ENSMUSG00000022325	Pop1	89	46.674	ENSNBRG00000002356	pop1	94	46.978	Neolamprologus_brichardi
ENSMUSG00000022325	Pop1	100	76.758	ENSNLEG00000002541	POP1	100	76.758	Nomascus_leucogenys
ENSMUSG00000022325	Pop1	93	57.084	ENSMEUG00000003118	POP1	98	56.629	Notamacropus_eugenii
ENSMUSG00000022325	Pop1	100	73.386	ENSOPRG00000007667	POP1	100	73.386	Ochotona_princeps
ENSMUSG00000022325	Pop1	100	75.269	ENSODEG00000003984	POP1	100	75.269	Octodon_degus
ENSMUSG00000022325	Pop1	100	47.198	ENSONIG00000016445	pop1	100	47.064	Oreochromis_niloticus
ENSMUSG00000022325	Pop1	62	70.732	ENSOANG00000001278	-	94	70.732	Ornithorhynchus_anatinus
ENSMUSG00000022325	Pop1	100	73.786	ENSOCUG00000017400	POP1	100	73.786	Oryctolagus_cuniculus
ENSMUSG00000022325	Pop1	92	47.385	ENSORLG00000002839	pop1	100	45.865	Oryzias_latipes
ENSMUSG00000022325	Pop1	90	46.588	ENSORLG00020022450	POP1	96	47.216	Oryzias_latipes_hni
ENSMUSG00000022325	Pop1	92	47.534	ENSORLG00015012746	POP1	100	45.962	Oryzias_latipes_hsok
ENSMUSG00000022325	Pop1	100	46.214	ENSOMEG00000006915	pop1	99	45.340	Oryzias_melastigma
ENSMUSG00000022325	Pop1	100	74.805	ENSOGAG00000001466	POP1	100	74.805	Otolemur_garnettii
ENSMUSG00000022325	Pop1	100	77.051	ENSPPAG00000018410	POP1	100	77.051	Pan_paniscus
ENSMUSG00000022325	Pop1	100	75.415	ENSPPRG00000005002	POP1	100	75.415	Panthera_pardus
ENSMUSG00000022325	Pop1	100	75.610	ENSPTIG00000016527	POP1	100	75.610	Panthera_tigris_altaica
ENSMUSG00000022325	Pop1	100	77.148	ENSPTRG00000020458	POP1	100	77.148	Pan_troglodytes
ENSMUSG00000022325	Pop1	100	76.660	ENSPANG00000009704	POP1	100	76.660	Papio_anubis
ENSMUSG00000022325	Pop1	100	48.023	ENSPKIG00000016325	POP1	100	48.123	Paramormyrops_kingsleyae
ENSMUSG00000022325	Pop1	100	60.511	ENSPSIG00000012343	POP1	100	60.511	Pelodiscus_sinensis
ENSMUSG00000022325	Pop1	90	48.652	ENSPMGG00000022253	POP1	95	47.950	Periophthalmus_magnuspinnatus
ENSMUSG00000022325	Pop1	99	84.402	ENSPEMG00000023633	Pop1	100	84.402	Peromyscus_maniculatus_bairdii
ENSMUSG00000022325	Pop1	90	43.418	ENSPMAG00000003209	POP1	100	43.677	Petromyzon_marinus
ENSMUSG00000022325	Pop1	100	64.050	ENSPCIG00000012216	POP1	100	64.244	Phascolarctos_cinereus
ENSMUSG00000022325	Pop1	100	45.429	ENSPFOG00000012490	POP1	100	45.024	Poecilia_formosa
ENSMUSG00000022325	Pop1	100	44.943	ENSPLAG00000004646	POP1	100	44.539	Poecilia_latipinna
ENSMUSG00000022325	Pop1	100	45.480	ENSPMEG00000019592	POP1	100	45.170	Poecilia_mexicana
ENSMUSG00000022325	Pop1	100	44.742	ENSPREG00000020951	POP1	100	44.339	Poecilia_reticulata
ENSMUSG00000022325	Pop1	100	76.660	ENSPPYG00000018777	POP1	100	76.660	Pongo_abelii
ENSMUSG00000022325	Pop1	100	68.683	ENSPCAG00000016662	POP1	100	68.683	Procavia_capensis
ENSMUSG00000022325	Pop1	100	77.126	ENSPCOG00000019420	POP1	100	77.126	Propithecus_coquereli
ENSMUSG00000022325	Pop1	100	74.439	ENSPVAG00000014468	POP1	100	74.439	Pteropus_vampyrus
ENSMUSG00000022325	Pop1	89	47.896	ENSPNYG00000004476	pop1	95	47.919	Pundamilia_nyererei
ENSMUSG00000022325	Pop1	100	44.044	ENSPNAG00000000265	pop1	100	44.044	Pygocentrus_nattereri
ENSMUSG00000022325	Pop1	100	91.100	ENSRNOG00000005243	Pop1	100	91.100	Rattus_norvegicus
ENSMUSG00000022325	Pop1	100	76.758	ENSRBIG00000007996	POP1	100	76.758	Rhinopithecus_bieti
ENSMUSG00000022325	Pop1	100	76.758	ENSRROG00000012334	POP1	100	76.758	Rhinopithecus_roxellana
ENSMUSG00000022325	Pop1	99	76.877	ENSSBOG00000020830	POP1	100	76.877	Saimiri_boliviensis_boliviensis
ENSMUSG00000022325	Pop1	100	63.653	ENSSHAG00000000296	POP1	100	63.007	Sarcophilus_harrisii
ENSMUSG00000022325	Pop1	100	47.885	ENSSFOG00015007429	pop1	99	47.885	Scleropages_formosus
ENSMUSG00000022325	Pop1	86	50.076	ENSSMAG00000010467	POP1	98	46.010	Scophthalmus_maximus
ENSMUSG00000022325	Pop1	100	45.619	ENSSDUG00000007817	POP1	100	46.008	Seriola_dumerili
ENSMUSG00000022325	Pop1	100	45.403	ENSSLDG00000012565	POP1	100	45.506	Seriola_lalandi_dorsalis
ENSMUSG00000022325	Pop1	100	55.879	ENSSPUG00000003550	-	100	55.879	Sphenodon_punctatus
ENSMUSG00000022325	Pop1	90	47.078	ENSSPAG00000014955	pop1	100	44.477	Stegastes_partitus
ENSMUSG00000022325	Pop1	100	74.435	ENSSSCG00000006078	POP1	100	74.435	Sus_scrofa
ENSMUSG00000022325	Pop1	92	55.414	ENSTGUG00000012011	-	100	55.403	Taeniopygia_guttata
ENSMUSG00000022325	Pop1	91	46.178	ENSTRUG00000010856	pop1	94	45.754	Takifugu_rubripes
ENSMUSG00000022325	Pop1	93	46.694	ENSTNIG00000013297	pop1	100	46.708	Tetraodon_nigroviridis
ENSMUSG00000022325	Pop1	95	72.541	ENSTBEG00000014214	POP1	99	72.541	Tupaia_belangeri
ENSMUSG00000022325	Pop1	100	72.656	ENSTTRG00000016071	POP1	100	72.656	Tursiops_truncatus
ENSMUSG00000022325	Pop1	99	69.990	ENSUAMG00000017309	POP1	100	69.990	Ursus_americanus
ENSMUSG00000022325	Pop1	91	85.425	ENSUMAG00000016952	POP1	100	85.425	Ursus_maritimus
ENSMUSG00000022325	Pop1	83	84.249	ENSVPAG00000008278	POP1	82	84.249	Vicugna_pacos
ENSMUSG00000022325	Pop1	100	73.633	ENSVVUG00000010994	POP1	100	73.633	Vulpes_vulpes
ENSMUSG00000022325	Pop1	100	40.822	ENSXCOG00000017043	POP1	100	40.801	Xiphophorus_couchianus
ENSMUSG00000022325	Pop1	100	44.689	ENSXMAG00000002472	POP1	100	44.286	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000171	ribonuclease MRP activity	21873635.	IBA	Function
GO:0000171	ribonuclease MRP activity	-	ISO	Function
GO:0000172	ribonuclease MRP complex	21873635.	IBA	Component
GO:0000172	ribonuclease MRP complex	-	ISO	Component
GO:0001682	tRNA 5'-leader removal	-	ISO	Process
GO:0004526	ribonuclease P activity	21873635.	IBA	Function
GO:0004526	ribonuclease P activity	-	ISO	Function
GO:0004526	ribonuclease P activity	-	ISO	Function
GO:0005655	nucleolar ribonuclease P complex	21873635.	IBA	Component
GO:0005655	nucleolar ribonuclease P complex	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0008033	tRNA processing	21873635.	IBA	Process
GO:0016078	tRNA catabolic process	-	ISO	Process
GO:0030681	multimeric ribonuclease P complex	-	ISO	Component