EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000226336	-	2547	-	ENSMUSP00000154687	53 (aa)	-	A0A2I3BRR5
ENSMUST00000060652	-	3000	-	ENSMUSP00000052905	101 (aa)	-	Q9JIX0
ENSMUST00000228474	-	2708	-	-	- (aa)	-	-
ENSMUST00000232353	-	849	-	-	- (aa)	-	-
ENSMUST00000226827	-	558	XM_006520758	ENSMUSP00000154515	96 (aa)	XP_006520821	A0A2I3BRK6
ENSMUST00000228372	-	684	-	-	- (aa)	-	-
ENSMUST00000226355	-	767	-	ENSMUSP00000154030	56 (aa)	-	A0A2I3BQ37
ENSMUST00000232045	-	848	-	-	- (aa)	-	-
ENSMUST00000227425	-	502	-	ENSMUSP00000154226	56 (aa)	-	A0A2I3BQK0
ENSMUST00000228130	-	654	-	ENSMUSP00000154106	51 (aa)	-	A0A2I3BQB4

Gene Model

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000124	SAGA complex	21873635.	IBA	Component
GO:0000124	SAGA complex	-	ISO	Component
GO:0003682	chromatin binding	21873635.	IBA	Function
GO:0003713	transcription coactivator activity	21873635.	IBA	Function
GO:0003713	transcription coactivator activity	-	ISO	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005643	nuclear pore	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0006357	regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0006406	mRNA export from nucleus	-	IEA	Process
GO:0015031	protein transport	-	IEA	Process
GO:0016578	histone deubiquitination	21873635.	IBA	Process
GO:0016578	histone deubiquitination	-	ISO	Process
GO:0016973	poly(A)+ mRNA export from nucleus	21873635.	IBA	Process
GO:0016973	poly(A)+ mRNA export from nucleus	-	ISO	Process
GO:0030374	nuclear receptor transcription coactivator activity	-	ISO	Function
GO:0044615	nuclear pore nuclear basket	-	ISO	Component
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process
GO:0051028	mRNA transport	-	IEA	Process
GO:0061179	negative regulation of insulin secretion involved in cellular response to glucose stimulus	-	ISO	Process
GO:0070390	transcription export complex 2	-	ISO	Component
GO:0071819	DUBm complex	21873635.	IBA	Component
GO:0071819	DUBm complex	-	ISO	Component