EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022370 (Gene tree)
Gene ID: 68537
Gene Symbol: Mrpl13
Alias: 1110002D09Rik
Full Name: mitochondrial ribosomal protein L13
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 23655 bases
Position: chr15:55534094-55557748
Accession: 2137218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000130722	Ribosomal_L13	PF00572.18	1.6e-45	1	1
ENSMUSP00000125887	Ribosomal_L13	PF00572.18	8.8e-19	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000107207	-	664	-	-	- (aa)	-	-
ENSMUST00000165356	-	687	-	ENSMUSP00000125887	98 (aa)	-	F7CXG9
ENSMUST00000164542	-	730	-	ENSMUSP00000127456	58 (aa)	-	G5E909
ENSMUST00000170135	-	6008	-	-	- (aa)	-	-
ENSMUST00000172387	-	1223	-	ENSMUSP00000130722	178 (aa)	-	Q9D1P0

Gene Model

Click here to download ENSMUSG00000022370's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022370's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022370	Mrpl13	100	91.837	ENSG00000172172	MRPL13	100	89.796	Homo_sapiens
ENSMUSG00000022370	Mrpl13	100	80.612	ENSAPOG00000004881	mrpl13	99	76.966	Acanthochromis_polyacanthus
ENSMUSG00000022370	Mrpl13	100	92.857	ENSAMEG00000002225	MRPL13	100	89.888	Ailuropoda_melanoleuca
ENSMUSG00000022370	Mrpl13	100	76.531	ENSACIG00000011101	mrpl13	99	73.034	Amphilophus_citrinellus
ENSMUSG00000022370	Mrpl13	100	78.571	ENSAOCG00000001749	mrpl13	99	75.843	Amphiprion_ocellaris
ENSMUSG00000022370	Mrpl13	100	78.571	ENSAPEG00000019583	mrpl13	99	75.843	Amphiprion_percula
ENSMUSG00000022370	Mrpl13	100	79.592	ENSATEG00000023882	mrpl13	99	74.719	Anabas_testudineus
ENSMUSG00000022370	Mrpl13	100	86.735	ENSACAG00000009255	MRPL13	81	80.814	Anolis_carolinensis
ENSMUSG00000022370	Mrpl13	100	93.878	ENSANAG00000033601	MRPL13	100	91.011	Aotus_nancymaae
ENSMUSG00000022370	Mrpl13	100	77.551	ENSACLG00000013200	mrpl13	99	74.719	Astatotilapia_calliptera
ENSMUSG00000022370	Mrpl13	100	86.735	ENSAMXG00000041931	mrpl13	99	79.775	Astyanax_mexicanus
ENSMUSG00000022370	Mrpl13	100	93.878	ENSBTAG00000006767	MRPL13	100	89.888	Bos_taurus
ENSMUSG00000022370	Mrpl13	96	44.681	WBGene00008769	mrpl-13	82	40.828	Caenorhabditis_elegans
ENSMUSG00000022370	Mrpl13	100	93.878	ENSCJAG00000023047	-	100	90.449	Callithrix_jacchus
ENSMUSG00000022370	Mrpl13	100	94.898	ENSCJAG00000005359	-	100	91.011	Callithrix_jacchus
ENSMUSG00000022370	Mrpl13	100	91.837	ENSCAFG00000000940	MRPL13	100	90.449	Canis_familiaris
ENSMUSG00000022370	Mrpl13	100	91.837	ENSCAFG00020005790	MRPL13	100	91.860	Canis_lupus_dingo
ENSMUSG00000022370	Mrpl13	100	74.157	ENSCHIG00000008412	-	85	74.157	Capra_hircus
ENSMUSG00000022370	Mrpl13	100	85.714	ENSCHIG00000013190	-	100	84.831	Capra_hircus
ENSMUSG00000022370	Mrpl13	100	74.719	ENSCHIG00000006914	-	99	74.719	Capra_hircus
ENSMUSG00000022370	Mrpl13	100	93.878	ENSCHIG00000024054	-	100	91.279	Capra_hircus
ENSMUSG00000022370	Mrpl13	100	90.816	ENSTSYG00000011331	MRPL13	88	91.803	Carlito_syrichta
ENSMUSG00000022370	Mrpl13	100	87.755	ENSCAPG00000006896	MRPL13	100	86.982	Cavia_aperea
ENSMUSG00000022370	Mrpl13	100	87.640	ENSCPOG00000005791	MRPL13	100	87.640	Cavia_porcellus
ENSMUSG00000022370	Mrpl13	100	93.878	ENSCCAG00000034544	MRPL13	100	91.011	Cebus_capucinus
ENSMUSG00000022370	Mrpl13	100	93.878	ENSCATG00000044803	MRPL13	100	90.449	Cercocebus_atys
ENSMUSG00000022370	Mrpl13	100	88.776	ENSCLAG00000005646	MRPL13	100	88.202	Chinchilla_lanigera
ENSMUSG00000022370	Mrpl13	100	93.878	ENSCSAG00000010722	MRPL13	100	90.449	Chlorocebus_sabaeus
ENSMUSG00000022370	Mrpl13	100	84.694	ENSCHOG00000006926	MRPL13	100	71.823	Choloepus_hoffmanni
ENSMUSG00000022370	Mrpl13	100	83.673	ENSCPBG00000015289	MRPL13	64	79.661	Chrysemys_picta_bellii
ENSMUSG00000022370	Mrpl13	98	51.685	ENSCING00000005447	-	98	51.685	Ciona_intestinalis
ENSMUSG00000022370	Mrpl13	100	93.878	ENSCANG00000041741	MRPL13	100	89.888	Colobus_angolensis_palliatus
ENSMUSG00000022370	Mrpl13	100	95.918	ENSCGRG00001015700	Mrpl13	100	94.382	Cricetulus_griseus_chok1gshd
ENSMUSG00000022370	Mrpl13	88	90.196	ENSCGRG00000018038	Mrpl13	100	95.098	Cricetulus_griseus_crigri
ENSMUSG00000022370	Mrpl13	100	81.633	ENSCSEG00000005024	mrpl13	98	75.568	Cynoglossus_semilaevis
ENSMUSG00000022370	Mrpl13	100	74.490	ENSCVAG00000019608	mrpl13	99	73.034	Cyprinodon_variegatus
ENSMUSG00000022370	Mrpl13	100	78.571	ENSDARG00000056903	mrpl13	99	74.719	Danio_rerio
ENSMUSG00000022370	Mrpl13	100	89.796	ENSDNOG00000046226	MRPL13	100	88.202	Dasypus_novemcinctus
ENSMUSG00000022370	Mrpl13	100	92.857	ENSDORG00000016654	Mrpl13	100	90.854	Dipodomys_ordii
ENSMUSG00000022370	Mrpl13	98	48.276	FBgn0032720	mRpL13	98	48.276	Drosophila_melanogaster
ENSMUSG00000022370	Mrpl13	84	81.633	ENSETEG00000017682	MRPL13	100	56.180	Echinops_telfairi
ENSMUSG00000022370	Mrpl13	83	75.000	ENSEBUG00000007958	-	85	61.842	Eptatretus_burgeri
ENSMUSG00000022370	Mrpl13	63	93.548	ENSEASG00005002544	-	100	89.706	Equus_asinus_asinus
ENSMUSG00000022370	Mrpl13	100	94.898	ENSECAG00000021161	MRPL13	100	92.135	Equus_caballus
ENSMUSG00000022370	Mrpl13	100	90.816	ENSEEUG00000006391	MRPL13	100	81.461	Erinaceus_europaeus
ENSMUSG00000022370	Mrpl13	100	79.592	ENSELUG00000023304	mrpl13	99	74.719	Esox_lucius
ENSMUSG00000022370	Mrpl13	100	91.837	ENSFCAG00000001463	MRPL13	100	90.449	Felis_catus
ENSMUSG00000022370	Mrpl13	100	80.612	ENSFALG00000002422	MRPL13	99	78.431	Ficedula_albicollis
ENSMUSG00000022370	Mrpl13	100	86.735	ENSFDAG00000006554	MRPL13	100	85.955	Fukomys_damarensis
ENSMUSG00000022370	Mrpl13	100	74.490	ENSFHEG00000001907	mrpl13	99	73.596	Fundulus_heteroclitus
ENSMUSG00000022370	Mrpl13	99	75.258	ENSGMOG00000004838	mrpl13	100	75.362	Gadus_morhua
ENSMUSG00000022370	Mrpl13	100	81.633	ENSGALG00000041863	MRPL13	98	78.409	Gallus_gallus
ENSMUSG00000022370	Mrpl13	100	74.490	ENSGAFG00000002007	mrpl13	99	73.034	Gambusia_affinis
ENSMUSG00000022370	Mrpl13	100	78.571	ENSGACG00000007061	mrpl13	99	76.552	Gasterosteus_aculeatus
ENSMUSG00000022370	Mrpl13	100	83.673	ENSGAGG00000025331	-	99	80.791	Gopherus_agassizii
ENSMUSG00000022370	Mrpl13	100	79.213	ENSGGOG00000024629	MRPL13	100	79.213	Gorilla_gorilla
ENSMUSG00000022370	Mrpl13	100	78.571	ENSHBUG00000012259	mrpl13	99	75.281	Haplochromis_burtoni
ENSMUSG00000022370	Mrpl13	100	88.776	ENSHGLG00000007021	MRPL13	100	87.640	Heterocephalus_glaber_female
ENSMUSG00000022370	Mrpl13	100	88.776	ENSHGLG00100016348	MRPL13	100	87.640	Heterocephalus_glaber_male
ENSMUSG00000022370	Mrpl13	100	78.571	ENSHCOG00000012037	mrpl13	99	75.281	Hippocampus_comes
ENSMUSG00000022370	Mrpl13	100	75.281	ENSIPUG00000009071	mrpl13	99	75.281	Ictalurus_punctatus
ENSMUSG00000022370	Mrpl13	100	92.857	ENSSTOG00000014264	MRPL13	100	91.573	Ictidomys_tridecemlineatus
ENSMUSG00000022370	Mrpl13	100	89.796	ENSJJAG00000019308	Mrpl13	100	88.764	Jaculus_jaculus
ENSMUSG00000022370	Mrpl13	100	78.571	ENSKMAG00000018091	mrpl13	99	76.404	Kryptolebias_marmoratus
ENSMUSG00000022370	Mrpl13	100	76.531	ENSLBEG00000006340	mrpl13	99	74.157	Labrus_bergylta
ENSMUSG00000022370	Mrpl13	100	82.653	ENSLACG00000015467	MRPL13	98	77.907	Latimeria_chalumnae
ENSMUSG00000022370	Mrpl13	100	82.653	ENSLOCG00000009210	mrpl13	99	78.090	Lepisosteus_oculatus
ENSMUSG00000022370	Mrpl13	100	93.878	ENSLAFG00000012985	MRPL13	99	88.636	Loxodonta_africana
ENSMUSG00000022370	Mrpl13	100	93.878	ENSMFAG00000009755	MRPL13	100	90.449	Macaca_fascicularis
ENSMUSG00000022370	Mrpl13	100	93.878	ENSMMUG00000002599	MRPL13	100	90.449	Macaca_mulatta
ENSMUSG00000022370	Mrpl13	100	93.878	ENSMNEG00000034159	MRPL13	100	90.449	Macaca_nemestrina
ENSMUSG00000022370	Mrpl13	100	93.878	ENSMLEG00000009613	MRPL13	100	90.449	Mandrillus_leucophaeus
ENSMUSG00000022370	Mrpl13	100	79.592	ENSMAMG00000023991	mrpl13	99	76.404	Mastacembelus_armatus
ENSMUSG00000022370	Mrpl13	100	77.551	ENSMZEG00005025500	mrpl13	99	74.719	Maylandia_zebra
ENSMUSG00000022370	Mrpl13	100	93.878	ENSMAUG00000015546	-	99	87.500	Mesocricetus_auratus
ENSMUSG00000022370	Mrpl13	100	96.939	ENSMAUG00000009122	-	100	96.939	Mesocricetus_auratus
ENSMUSG00000022370	Mrpl13	100	92.857	ENSMICG00000014630	MRPL13	100	90.449	Microcebus_murinus
ENSMUSG00000022370	Mrpl13	100	93.878	ENSMOCG00000018794	Mrpl13	100	92.697	Microtus_ochrogaster
ENSMUSG00000022370	Mrpl13	100	79.592	ENSMMOG00000008934	mrpl13	99	77.528	Mola_mola
ENSMUSG00000022370	Mrpl13	100	91.837	ENSMODG00000002300	MRPL13	100	89.888	Monodelphis_domestica
ENSMUSG00000022370	Mrpl13	100	79.592	ENSMALG00000008122	mrpl13	100	77.193	Monopterus_albus
ENSMUSG00000022370	Mrpl13	100	100.000	MGP_CAROLIEiJ_G0019799	Mrpl13	100	100.000	Mus_caroli
ENSMUSG00000022370	Mrpl13	100	98.980	MGP_PahariEiJ_G0019809	Mrpl13	100	98.980	Mus_pahari
ENSMUSG00000022370	Mrpl13	100	100.000	MGP_SPRETEiJ_G0020696	Mrpl13	100	100.000	Mus_spretus
ENSMUSG00000022370	Mrpl13	100	90.816	ENSMPUG00000001080	MRPL13	98	89.714	Mustela_putorius_furo
ENSMUSG00000022370	Mrpl13	100	95.918	ENSMLUG00000009756	MRPL13	100	92.697	Myotis_lucifugus
ENSMUSG00000022370	Mrpl13	100	94.898	ENSNGAG00000024334	Mrpl13	100	92.697	Nannospalax_galili
ENSMUSG00000022370	Mrpl13	100	77.551	ENSNBRG00000021965	mrpl13	99	74.719	Neolamprologus_brichardi
ENSMUSG00000022370	Mrpl13	100	92.857	ENSNLEG00000028268	MRPL13	100	89.888	Nomascus_leucogenys
ENSMUSG00000022370	Mrpl13	88	82.353	ENSMEUG00000004590	-	100	52.047	Notamacropus_eugenii
ENSMUSG00000022370	Mrpl13	100	92.857	ENSOPRG00000015721	MRPL13	100	90.341	Ochotona_princeps
ENSMUSG00000022370	Mrpl13	99	88.660	ENSODEG00000001950	MRPL13	100	87.640	Octodon_degus
ENSMUSG00000022370	Mrpl13	100	87.079	ENSOANG00000000414	MRPL13	99	87.079	Ornithorhynchus_anatinus
ENSMUSG00000022370	Mrpl13	100	91.837	ENSOCUG00000016189	MRPL13	100	89.888	Oryctolagus_cuniculus
ENSMUSG00000022370	Mrpl13	100	76.531	ENSORLG00000004647	mrpl13	99	74.157	Oryzias_latipes
ENSMUSG00000022370	Mrpl13	100	76.531	ENSORLG00020022623	mrpl13	99	74.719	Oryzias_latipes_hni
ENSMUSG00000022370	Mrpl13	100	76.531	ENSORLG00015008036	mrpl13	83	75.581	Oryzias_latipes_hsok
ENSMUSG00000022370	Mrpl13	100	75.510	ENSOMEG00000011732	mrpl13	99	74.157	Oryzias_melastigma
ENSMUSG00000022370	Mrpl13	100	91.837	ENSOGAG00000014284	MRPL13	99	89.831	Otolemur_garnettii
ENSMUSG00000022370	Mrpl13	100	92.857	ENSOARG00000019181	-	100	87.640	Ovis_aries
ENSMUSG00000022370	Mrpl13	100	92.857	ENSOARG00000017405	-	87	90.116	Ovis_aries
ENSMUSG00000022370	Mrpl13	100	92.857	ENSPPAG00000043579	MRPL13	100	89.888	Pan_paniscus
ENSMUSG00000022370	Mrpl13	100	91.837	ENSPPRG00000024807	MRPL13	100	90.449	Panthera_pardus
ENSMUSG00000022370	Mrpl13	100	91.837	ENSPTIG00000021819	MRPL13	100	90.449	Panthera_tigris_altaica
ENSMUSG00000022370	Mrpl13	100	92.857	ENSPTRG00000020541	MRPL13	100	89.888	Pan_troglodytes
ENSMUSG00000022370	Mrpl13	100	93.878	ENSPANG00000001115	MRPL13	100	90.449	Papio_anubis
ENSMUSG00000022370	Mrpl13	100	79.592	ENSPKIG00000018874	mrpl13	99	78.090	Paramormyrops_kingsleyae
ENSMUSG00000022370	Mrpl13	100	85.714	ENSPSIG00000008016	MRPL13	99	82.738	Pelodiscus_sinensis
ENSMUSG00000022370	Mrpl13	100	80.612	ENSPMGG00000022710	mrpl13	99	75.843	Periophthalmus_magnuspinnatus
ENSMUSG00000022370	Mrpl13	100	94.898	ENSPEMG00000016375	Mrpl13	100	93.258	Peromyscus_maniculatus_bairdii
ENSMUSG00000022370	Mrpl13	100	69.388	ENSPMAG00000007735	-	98	69.886	Petromyzon_marinus
ENSMUSG00000022370	Mrpl13	100	86.735	ENSPCIG00000019489	MRPL13	100	85.955	Phascolarctos_cinereus
ENSMUSG00000022370	Mrpl13	100	75.510	ENSPFOG00000010630	mrpl13	99	74.157	Poecilia_formosa
ENSMUSG00000022370	Mrpl13	100	75.510	ENSPLAG00000013671	mrpl13	99	74.157	Poecilia_latipinna
ENSMUSG00000022370	Mrpl13	100	75.510	ENSPMEG00000002019	mrpl13	99	74.157	Poecilia_mexicana
ENSMUSG00000022370	Mrpl13	100	74.490	ENSPREG00000009510	mrpl13	99	73.596	Poecilia_reticulata
ENSMUSG00000022370	Mrpl13	100	85.714	ENSPPYG00000018847	-	87	84.466	Pongo_abelii
ENSMUSG00000022370	Mrpl13	100	93.878	ENSPCAG00000001541	MRPL13	100	89.888	Procavia_capensis
ENSMUSG00000022370	Mrpl13	88	86.275	ENSPCOG00000016230	MRPL13	92	93.130	Propithecus_coquereli
ENSMUSG00000022370	Mrpl13	100	82.584	ENSPVAG00000003719	MRPL13	100	82.584	Pteropus_vampyrus
ENSMUSG00000022370	Mrpl13	100	78.571	ENSPNYG00000004669	mrpl13	99	75.281	Pundamilia_nyererei
ENSMUSG00000022370	Mrpl13	100	74.490	ENSPNAG00000009319	mrpl13	99	73.596	Pygocentrus_nattereri
ENSMUSG00000022370	Mrpl13	100	96.939	ENSRNOG00000004401	Mrpl13	100	96.067	Rattus_norvegicus
ENSMUSG00000022370	Mrpl13	97	77.586	ENSRBIG00000035341	MRPL13	98	77.586	Rhinopithecus_bieti
ENSMUSG00000022370	Mrpl13	100	93.878	ENSRROG00000044613	MRPL13	100	90.449	Rhinopithecus_roxellana
ENSMUSG00000022370	Mrpl13	100	93.878	ENSSBOG00000003037	MRPL13	100	91.011	Saimiri_boliviensis_boliviensis
ENSMUSG00000022370	Mrpl13	100	82.653	ENSSFOG00015005149	mrpl13	99	78.652	Scleropages_formosus
ENSMUSG00000022370	Mrpl13	100	78.571	ENSSMAG00000002558	mrpl13	99	74.157	Scophthalmus_maximus
ENSMUSG00000022370	Mrpl13	100	80.612	ENSSDUG00000016507	mrpl13	99	76.966	Seriola_dumerili
ENSMUSG00000022370	Mrpl13	100	80.612	ENSSLDG00000022405	mrpl13	99	77.528	Seriola_lalandi_dorsalis
ENSMUSG00000022370	Mrpl13	99	94.845	ENSSARG00000014236	MRPL13	100	95.000	Sorex_araneus
ENSMUSG00000022370	Mrpl13	100	81.633	ENSSPUG00000008445	MRPL13	98	80.114	Sphenodon_punctatus
ENSMUSG00000022370	Mrpl13	100	78.571	ENSSPAG00000013067	mrpl13	99	75.281	Stegastes_partitus
ENSMUSG00000022370	Mrpl13	100	95.918	ENSSSCG00000005996	MRPL13	90	92.135	Sus_scrofa
ENSMUSG00000022370	Mrpl13	100	75.510	ENSTRUG00000023240	mrpl13	99	74.157	Takifugu_rubripes
ENSMUSG00000022370	Mrpl13	93	75.824	ENSTNIG00000009643	mrpl13	99	61.017	Tetraodon_nigroviridis
ENSMUSG00000022370	Mrpl13	92	91.111	ENSTBEG00000004571	MRPL13	100	71.006	Tupaia_belangeri
ENSMUSG00000022370	Mrpl13	100	94.898	ENSTTRG00000005939	MRPL13	100	92.135	Tursiops_truncatus
ENSMUSG00000022370	Mrpl13	90	84.615	ENSUAMG00000009636	MRPL13	100	77.011	Ursus_americanus
ENSMUSG00000022370	Mrpl13	100	93.878	ENSUMAG00000021939	MRPL13	100	90.449	Ursus_maritimus
ENSMUSG00000022370	Mrpl13	100	80.899	ENSVPAG00000000774	MRPL13	100	80.899	Vicugna_pacos
ENSMUSG00000022370	Mrpl13	100	81.034	ENSVVUG00000016056	MRPL13	98	81.034	Vulpes_vulpes
ENSMUSG00000022370	Mrpl13	83	70.667	ENSXETG00000025658	mrpl13	100	70.667	Xenopus_tropicalis
ENSMUSG00000022370	Mrpl13	100	75.510	ENSXCOG00000016141	mrpl13	99	73.596	Xiphophorus_couchianus
ENSMUSG00000022370	Mrpl13	100	75.510	ENSXMAG00000010846	mrpl13	99	73.596	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	ISO	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005761	mitochondrial ribosome	24703694.	IDA	Component
GO:0005761	mitochondrial ribosome	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	21531335.	ISO	Component
GO:0005840	ribosome	21873635.	IBA	Component
GO:0006412	translation	-	ISO	Process
GO:0017148	negative regulation of translation	21873635.	IBA	Process