EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022386 (Gene tree)
Gene ID: 72026
Gene Symbol: Trmu
Alias: 1110005N20Rik|1600025P05Rik|Trmt1
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 18083 bases
Position: chr15:85879312-85897394
Accession: 1919276
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000023019	tRNA_Me_trans	PF03054.16	2.2e-140	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000023019	-	1526	XM_006521422	ENSMUSP00000023019	417 (aa)	XP_006521485	Q9DAT5
ENSMUST00000162010	-	774	-	-	- (aa)	-	-
ENSMUST00000159730	-	2077	-	-	- (aa)	-	-
ENSMUST00000160733	-	314	-	-	- (aa)	-	-
ENSMUST00000162601	-	743	-	-	- (aa)	-	-
ENSMUST00000161784	-	814	-	-	- (aa)	-	-
ENSMUST00000159362	-	869	-	-	- (aa)	-	-
ENSMUST00000162491	-	468	-	ENSMUSP00000125704	99 (aa)	-	E0CZ49
ENSMUST00000162339	-	665	-	ENSMUSP00000125266	58 (aa)	-	F7CNH0

Gene Model

Click here to download ENSMUSG00000022386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022386's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022386	Trmu	98	91.228	ENSG00000100416	TRMU	100	94.667	Homo_sapiens
ENSMUSG00000022386	Trmu	100	68.345	ENSAPOG00000014458	trmu	100	68.345	Acanthochromis_polyacanthus
ENSMUSG00000022386	Trmu	99	89.183	ENSAMEG00000003319	TRMU	99	89.183	Ailuropoda_melanoleuca
ENSMUSG00000022386	Trmu	97	67.990	ENSACIG00000002101	trmu	97	67.990	Amphilophus_citrinellus
ENSMUSG00000022386	Trmu	100	68.825	ENSAOCG00000013155	trmu	100	68.825	Amphiprion_ocellaris
ENSMUSG00000022386	Trmu	100	68.345	ENSAPEG00000013350	trmu	100	68.345	Amphiprion_percula
ENSMUSG00000022386	Trmu	98	68.613	ENSATEG00000007814	trmu	100	68.613	Anabas_testudineus
ENSMUSG00000022386	Trmu	92	78.329	ENSAPLG00000016380	TRMU	98	78.329	Anas_platyrhynchos
ENSMUSG00000022386	Trmu	100	76.259	ENSACAG00000007720	TRMU	100	76.259	Anolis_carolinensis
ENSMUSG00000022386	Trmu	99	88.078	ENSANAG00000038053	TRMU	97	88.078	Aotus_nancymaae
ENSMUSG00000022386	Trmu	99	68.357	ENSACLG00000005395	trmu	98	69.377	Astatotilapia_calliptera
ENSMUSG00000022386	Trmu	88	80.460	ENSAMXG00000005282	trmu	99	70.343	Astyanax_mexicanus
ENSMUSG00000022386	Trmu	99	87.740	ENSBTAG00000005595	TRMU	99	87.740	Bos_taurus
ENSMUSG00000022386	Trmu	77	57.692	WBGene00007114	mttu-1	98	39.433	Caenorhabditis_elegans
ENSMUSG00000022386	Trmu	99	86.506	ENSCJAG00000000198	TRMU	99	86.506	Callithrix_jacchus
ENSMUSG00000022386	Trmu	99	90.754	ENSCAFG00000000779	TRMU	98	89.928	Canis_familiaris
ENSMUSG00000022386	Trmu	99	90.754	ENSCAFG00020009184	TRMU	98	89.928	Canis_lupus_dingo
ENSMUSG00000022386	Trmu	100	88.489	ENSCHIG00000017074	TRMU	100	88.489	Capra_hircus
ENSMUSG00000022386	Trmu	99	87.981	ENSTSYG00000003853	TRMU	99	87.981	Carlito_syrichta
ENSMUSG00000022386	Trmu	96	83.055	ENSCAPG00000013034	TRMU	98	83.055	Cavia_aperea
ENSMUSG00000022386	Trmu	99	88.193	ENSCPOG00000020780	TRMU	99	88.193	Cavia_porcellus
ENSMUSG00000022386	Trmu	99	86.905	ENSCCAG00000021641	TRMU	99	86.905	Cebus_capucinus
ENSMUSG00000022386	Trmu	99	87.351	ENSCATG00000032800	TRMU	99	87.351	Cercocebus_atys
ENSMUSG00000022386	Trmu	99	90.238	ENSCLAG00000017269	TRMU	99	90.238	Chinchilla_lanigera
ENSMUSG00000022386	Trmu	99	88.067	ENSCSAG00000005279	TRMU	99	88.067	Chlorocebus_sabaeus
ENSMUSG00000022386	Trmu	86	84.000	ENSCPBG00000011621	TRMU	94	79.144	Chrysemys_picta_bellii
ENSMUSG00000022386	Trmu	80	60.759	ENSCING00000019371	-	96	46.056	Ciona_intestinalis
ENSMUSG00000022386	Trmu	99	87.589	ENSCANG00000041645	TRMU	99	87.589	Colobus_angolensis_palliatus
ENSMUSG00000022386	Trmu	99	95.913	ENSCGRG00001001739	Trmu	99	95.913	Cricetulus_griseus_chok1gshd
ENSMUSG00000022386	Trmu	99	87.981	ENSCGRG00000002781	Trmu	99	87.981	Cricetulus_griseus_crigri
ENSMUSG00000022386	Trmu	83	82.927	ENSCSEG00000012382	trmu	99	66.587	Cynoglossus_semilaevis
ENSMUSG00000022386	Trmu	100	68.585	ENSCVAG00000001366	trmu	100	68.585	Cyprinodon_variegatus
ENSMUSG00000022386	Trmu	96	68.000	ENSDARG00000043734	trmu	96	68.000	Danio_rerio
ENSMUSG00000022386	Trmu	54	84.141	ENSDNOG00000047245	-	84	80.833	Dasypus_novemcinctus
ENSMUSG00000022386	Trmu	99	87.835	ENSDORG00000007455	Trmu	100	87.835	Dipodomys_ordii
ENSMUSG00000022386	Trmu	89	41.823	FBgn0040337	CG3021	99	41.584	Drosophila_melanogaster
ENSMUSG00000022386	Trmu	82	87.654	ENSETEG00000009394	-	66	86.441	Echinops_telfairi
ENSMUSG00000022386	Trmu	95	53.483	ENSEBUG00000007454	trmu	99	53.483	Eptatretus_burgeri
ENSMUSG00000022386	Trmu	98	89.487	ENSEASG00005021725	TRMU	99	88.729	Equus_asinus_asinus
ENSMUSG00000022386	Trmu	98	89.487	ENSECAG00000000467	TRMU	99	88.729	Equus_caballus
ENSMUSG00000022386	Trmu	69	87.500	ENSEEUG00000000074	-	78	88.889	Erinaceus_europaeus
ENSMUSG00000022386	Trmu	99	65.777	ENSELUG00000009464	trmu	99	66.848	Esox_lucius
ENSMUSG00000022386	Trmu	98	89.487	ENSFCAG00000006533	TRMU	99	88.916	Felis_catus
ENSMUSG00000022386	Trmu	86	86.000	ENSFALG00000010035	TRMU	96	78.158	Ficedula_albicollis
ENSMUSG00000022386	Trmu	93	88.889	ENSFDAG00000017472	TRMU	98	88.889	Fukomys_damarensis
ENSMUSG00000022386	Trmu	100	68.825	ENSFHEG00000003162	trmu	100	68.825	Fundulus_heteroclitus
ENSMUSG00000022386	Trmu	97	62.162	ENSGMOG00000001323	trmu	100	62.162	Gadus_morhua
ENSMUSG00000022386	Trmu	96	77.887	ENSGALG00000031922	TRMU	96	77.887	Gallus_gallus
ENSMUSG00000022386	Trmu	100	75.758	ENSGAFG00000013331	trmu	100	75.758	Gambusia_affinis
ENSMUSG00000022386	Trmu	99	65.155	ENSGACG00000019024	trmu	99	65.155	Gasterosteus_aculeatus
ENSMUSG00000022386	Trmu	99	89.260	ENSGGOG00000000203	TRMU	99	89.260	Gorilla_gorilla
ENSMUSG00000022386	Trmu	99	67.874	ENSHBUG00000023421	trmu	99	67.874	Haplochromis_burtoni
ENSMUSG00000022386	Trmu	99	87.740	ENSHGLG00000009278	TRMU	99	87.740	Heterocephalus_glaber_female
ENSMUSG00000022386	Trmu	99	87.740	ENSHGLG00100018863	TRMU	99	87.740	Heterocephalus_glaber_male
ENSMUSG00000022386	Trmu	83	84.146	ENSHCOG00000013459	trmu	96	71.033	Hippocampus_comes
ENSMUSG00000022386	Trmu	98	68.382	ENSIPUG00000009785	trmu	100	68.382	Ictalurus_punctatus
ENSMUSG00000022386	Trmu	99	90.843	ENSSTOG00000010993	TRMU	99	90.843	Ictidomys_tridecemlineatus
ENSMUSG00000022386	Trmu	99	91.346	ENSJJAG00000000667	Trmu	99	91.346	Jaculus_jaculus
ENSMUSG00000022386	Trmu	100	67.866	ENSKMAG00000008516	trmu	100	67.866	Kryptolebias_marmoratus
ENSMUSG00000022386	Trmu	97	68.889	ENSLBEG00000018831	trmu	97	68.889	Labrus_bergylta
ENSMUSG00000022386	Trmu	97	73.399	ENSLACG00000013713	TRMU	97	73.399	Latimeria_chalumnae
ENSMUSG00000022386	Trmu	96	73.183	ENSLOCG00000016066	trmu	95	73.183	Lepisosteus_oculatus
ENSMUSG00000022386	Trmu	99	75.120	ENSLAFG00000005129	TRMU	99	75.120	Loxodonta_africana
ENSMUSG00000022386	Trmu	99	88.067	ENSMFAG00000039767	TRMU	99	88.067	Macaca_fascicularis
ENSMUSG00000022386	Trmu	99	88.067	ENSMMUG00000000807	TRMU	99	88.067	Macaca_mulatta
ENSMUSG00000022386	Trmu	99	88.067	ENSMNEG00000028164	TRMU	99	88.067	Macaca_nemestrina
ENSMUSG00000022386	Trmu	99	87.589	ENSMLEG00000033884	TRMU	99	87.589	Mandrillus_leucophaeus
ENSMUSG00000022386	Trmu	99	68.689	ENSMAMG00000004717	trmu	99	68.689	Mastacembelus_armatus
ENSMUSG00000022386	Trmu	99	68.357	ENSMZEG00005015797	trmu	99	68.357	Maylandia_zebra
ENSMUSG00000022386	Trmu	86	84.000	ENSMGAG00000007550	TRMU	95	76.380	Meleagris_gallopavo
ENSMUSG00000022386	Trmu	99	95.673	ENSMAUG00000022282	Trmu	99	95.673	Mesocricetus_auratus
ENSMUSG00000022386	Trmu	99	89.588	ENSMICG00000029046	TRMU	100	89.588	Microcebus_murinus
ENSMUSG00000022386	Trmu	99	95.433	ENSMOCG00000014641	Trmu	99	95.433	Microtus_ochrogaster
ENSMUSG00000022386	Trmu	85	80.952	ENSMMOG00000007229	trmu	100	67.788	Mola_mola
ENSMUSG00000022386	Trmu	99	78.019	ENSMODG00000007433	TRMU	96	78.019	Monodelphis_domestica
ENSMUSG00000022386	Trmu	98	65.865	ENSMALG00000007721	trmu	100	65.865	Monopterus_albus
ENSMUSG00000022386	Trmu	100	100.000	MGP_CAROLIEiJ_G0020134	Trmu	100	100.000	Mus_caroli
ENSMUSG00000022386	Trmu	100	100.000	MGP_PahariEiJ_G0020139	Trmu	100	100.000	Mus_pahari
ENSMUSG00000022386	Trmu	100	100.000	MGP_SPRETEiJ_G0021031	Trmu	100	100.000	Mus_spretus
ENSMUSG00000022386	Trmu	99	88.675	ENSMPUG00000002523	TRMU	99	88.675	Mustela_putorius_furo
ENSMUSG00000022386	Trmu	99	92.530	ENSNGAG00000005132	Trmu	99	92.530	Nannospalax_galili
ENSMUSG00000022386	Trmu	99	68.116	ENSNBRG00000022690	trmu	100	68.966	Neolamprologus_brichardi
ENSMUSG00000022386	Trmu	99	87.828	ENSNLEG00000015773	TRMU	99	87.828	Nomascus_leucogenys
ENSMUSG00000022386	Trmu	82	76.543	ENSMEUG00000000216	TRMU	99	70.122	Notamacropus_eugenii
ENSMUSG00000022386	Trmu	99	88.756	ENSODEG00000014745	TRMU	99	88.756	Octodon_degus
ENSMUSG00000022386	Trmu	99	68.116	ENSONIG00000009821	trmu	99	68.116	Oreochromis_niloticus
ENSMUSG00000022386	Trmu	92	76.364	ENSOANG00000001891	TRMU	97	76.364	Ornithorhynchus_anatinus
ENSMUSG00000022386	Trmu	93	89.203	ENSOCUG00000003664	TRMU	97	87.469	Oryctolagus_cuniculus
ENSMUSG00000022386	Trmu	98	66.586	ENSORLG00000019015	trmu	99	66.586	Oryzias_latipes
ENSMUSG00000022386	Trmu	98	66.344	ENSORLG00020006830	trmu	99	66.344	Oryzias_latipes_hni
ENSMUSG00000022386	Trmu	98	66.344	ENSORLG00015003907	trmu	99	66.344	Oryzias_latipes_hsok
ENSMUSG00000022386	Trmu	100	72.727	ENSOMEG00000015518	-	100	72.727	Oryzias_melastigma
ENSMUSG00000022386	Trmu	58	63.750	ENSOMEG00000015541	trmu	86	63.750	Oryzias_melastigma
ENSMUSG00000022386	Trmu	99	87.981	ENSOGAG00000008096	TRMU	99	87.981	Otolemur_garnettii
ENSMUSG00000022386	Trmu	100	80.096	ENSOARG00000019475	TRMU	100	80.096	Ovis_aries
ENSMUSG00000022386	Trmu	99	89.260	ENSPPAG00000033944	TRMU	99	89.260	Pan_paniscus
ENSMUSG00000022386	Trmu	97	90.123	ENSPPRG00000004197	TRMU	99	89.157	Panthera_pardus
ENSMUSG00000022386	Trmu	86	90.000	ENSPTIG00000014122	TRMU	98	89.474	Panthera_tigris_altaica
ENSMUSG00000022386	Trmu	99	89.260	ENSPTRG00000014510	TRMU	99	89.260	Pan_troglodytes
ENSMUSG00000022386	Trmu	95	90.380	ENSPANG00000023074	TRMU	96	87.535	Papio_anubis
ENSMUSG00000022386	Trmu	98	67.391	ENSPKIG00000002849	trmu	100	67.391	Paramormyrops_kingsleyae
ENSMUSG00000022386	Trmu	86	90.000	ENSPSIG00000013020	TRMU	96	80.874	Pelodiscus_sinensis
ENSMUSG00000022386	Trmu	98	69.268	ENSPMGG00000004083	trmu	99	69.268	Periophthalmus_magnuspinnatus
ENSMUSG00000022386	Trmu	99	96.154	ENSPEMG00000014007	Trmu	99	96.154	Peromyscus_maniculatus_bairdii
ENSMUSG00000022386	Trmu	96	78.947	ENSPCIG00000009923	TRMU	97	77.349	Phascolarctos_cinereus
ENSMUSG00000022386	Trmu	95	67.588	ENSPFOG00000008197	trmu	89	67.588	Poecilia_formosa
ENSMUSG00000022386	Trmu	99	69.586	ENSPLAG00000008414	trmu	99	69.586	Poecilia_latipinna
ENSMUSG00000022386	Trmu	100	69.305	ENSPMEG00000004326	trmu	100	69.305	Poecilia_mexicana
ENSMUSG00000022386	Trmu	99	69.586	ENSPREG00000007980	trmu	99	69.586	Poecilia_reticulata
ENSMUSG00000022386	Trmu	99	89.260	ENSPPYG00000011949	TRMU	99	89.260	Pongo_abelii
ENSMUSG00000022386	Trmu	86	86.000	ENSPCAG00000013462	TRMU	99	78.093	Procavia_capensis
ENSMUSG00000022386	Trmu	99	89.183	ENSPCOG00000016539	TRMU	99	89.183	Propithecus_coquereli
ENSMUSG00000022386	Trmu	83	93.902	ENSPVAG00000013202	TRMU	99	78.846	Pteropus_vampyrus
ENSMUSG00000022386	Trmu	99	67.874	ENSPNYG00000005629	trmu	99	67.874	Pundamilia_nyererei
ENSMUSG00000022386	Trmu	98	68.780	ENSPNAG00000006339	trmu	96	68.780	Pygocentrus_nattereri
ENSMUSG00000022386	Trmu	100	97.602	ENSRNOG00000016465	Trmu	100	97.602	Rattus_norvegicus
ENSMUSG00000022386	Trmu	99	87.351	ENSRBIG00000038973	TRMU	99	87.351	Rhinopithecus_bieti
ENSMUSG00000022386	Trmu	99	87.589	ENSRROG00000004267	TRMU	99	87.589	Rhinopithecus_roxellana
ENSMUSG00000022386	Trmu	91	30.923	YDL033C	SLM3	91	30.923	Saccharomyces_cerevisiae
ENSMUSG00000022386	Trmu	99	88.193	ENSSBOG00000030184	TRMU	99	88.193	Saimiri_boliviensis_boliviensis
ENSMUSG00000022386	Trmu	90	67.914	ENSSFOG00015020664	trmu	98	67.914	Scleropages_formosus
ENSMUSG00000022386	Trmu	96	68.922	ENSSMAG00000019450	trmu	96	68.922	Scophthalmus_maximus
ENSMUSG00000022386	Trmu	100	68.345	ENSSDUG00000011913	trmu	100	68.345	Seriola_dumerili
ENSMUSG00000022386	Trmu	100	68.585	ENSSLDG00000011684	trmu	100	68.585	Seriola_lalandi_dorsalis
ENSMUSG00000022386	Trmu	86	84.000	ENSSPUG00000017123	TRMU	95	68.750	Sphenodon_punctatus
ENSMUSG00000022386	Trmu	100	68.345	ENSSPAG00000021875	trmu	100	68.345	Stegastes_partitus
ENSMUSG00000022386	Trmu	98	88.480	ENSSSCG00000000007	TRMU	99	87.143	Sus_scrofa
ENSMUSG00000022386	Trmu	86	84.000	ENSTGUG00000003663	-	100	78.820	Taeniopygia_guttata
ENSMUSG00000022386	Trmu	97	70.968	ENSTRUG00000001231	trmu	98	70.968	Takifugu_rubripes
ENSMUSG00000022386	Trmu	90	79.775	ENSTRUG00000003403	-	89	79.775	Takifugu_rubripes
ENSMUSG00000022386	Trmu	97	70.617	ENSTNIG00000010484	trmu	96	70.617	Tetraodon_nigroviridis
ENSMUSG00000022386	Trmu	93	54.522	ENSTBEG00000011276	-	99	54.522	Tupaia_belangeri
ENSMUSG00000022386	Trmu	99	88.571	ENSTTRG00000004160	TRMU	99	88.571	Tursiops_truncatus
ENSMUSG00000022386	Trmu	83	91.463	ENSUAMG00000024825	TRMU	97	90.722	Ursus_americanus
ENSMUSG00000022386	Trmu	86	88.000	ENSUMAG00000019079	TRMU	97	90.272	Ursus_maritimus
ENSMUSG00000022386	Trmu	86	84.000	ENSVPAG00000000685	-	100	75.799	Vicugna_pacos
ENSMUSG00000022386	Trmu	99	90.120	ENSVVUG00000024963	TRMU	99	90.120	Vulpes_vulpes
ENSMUSG00000022386	Trmu	99	72.038	ENSXETG00000023304	trmu	99	72.038	Xenopus_tropicalis
ENSMUSG00000022386	Trmu	99	67.548	ENSXCOG00000015105	trmu	99	67.548	Xiphophorus_couchianus
ENSMUSG00000022386	Trmu	99	69.586	ENSXMAG00000006697	trmu	99	69.586	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0000166	nucleotide binding	-	IEA	Function
GO:0002143	tRNA wobble position uridine thiolation	21873635.	IBA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	14746906.	IDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0016783	sulfurtransferase activity	-	IEA	Function