EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022516 (Gene tree)
Gene ID: 66911
Gene Symbol: Nudt16l1
Alias: 1110001K21Rik|5330437I08Rik
Full Name: nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 2272
Position: chr16: 4938761-4941032
Accession: 1914161
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000230201	-	1004	-	-	- (aa)	-	-
ENSMUST00000229961	-	1162	-	ENSMUSP00000154873	199 (aa)	-	A0A2R8VH99
ENSMUST00000230931	-	1618	-	ENSMUSP00000155142	211 (aa)	-	Q8VHN8
ENSMUST00000230224	-	660	-	-	- (aa)	-	-
ENSMUST00000050881	-	1329	-	ENSMUSP00000054201	151 (aa)	-	Q8VHN8

Gene Model

Click here to download ENSMUSG00000022516's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05205	Proteoglycans in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022516's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022516	Nudt16l1	100	95.735	ENSG00000168101	NUDT16L1	100	95.735	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0016787	hydrolase activity	-	IEA	Function
GO:0030515	snoRNA binding	-	ISO	Function
GO:0050072	m7G(5')pppN diphosphatase activity	21070968.	IDA	Function
GO:2001033	negative regulation of double-strand break repair via nonhomologous end joining	-	ISO	Process