EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022552 (Gene tree)
Gene ID: 106025
Gene Symbol: Sharpin
Alias: 0610041B22Rik|SIPL1|cpdm
Full Name: SHANK-associated RH domain interacting protein
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 4072 bases
Position: chr15:76347040-76351111
Accession: 1913331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000124755	zf-RanBP	PF00641.18	2.4e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000229536	-	395	-	-	- (aa)	-	-
ENSMUST00000133993	-	1884	-	-	- (aa)	-	-
ENSMUST00000147001	-	854	-	-	- (aa)	-	-
ENSMUST00000160560	-	835	-	ENSMUSP00000125382	157 (aa)	-	E0CZH2
ENSMUST00000137106	-	835	-	-	- (aa)	-	-
ENSMUST00000230314	-	1271	-	ENSMUSP00000155231	157 (aa)	-	E0CZH2
ENSMUST00000159429	-	418	-	ENSMUSP00000124755	83 (aa)	-	F6UHH8
ENSMUST00000023211	-	1734	XM_006520263	ENSMUSP00000023211	380 (aa)	XP_006520326	Q91WA6
ENSMUST00000144816	-	1669	-	-	- (aa)	-	-
ENSMUST00000230016	-	478	-	-	- (aa)	-	-
ENSMUST00000123112	-	1896	-	-	- (aa)	-	-
ENSMUST00000152151	-	819	-	-	- (aa)	-	-
ENSMUST00000154477	-	1905	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000022552's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04217	Necroptosis	KEGG
mmu04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022552's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022552	Sharpin	99	73.256	ENSG00000179526	SHARPIN	91	73.256	Homo_sapiens
ENSMUSG00000022552	Sharpin	99	98.780	MGP_CAROLIEiJ_G0019922	Sharpin	100	98.780	Mus_caroli
ENSMUSG00000022552	Sharpin	99	97.561	MGP_PahariEiJ_G0019932	Sharpin	100	97.561	Mus_pahari
ENSMUSG00000022552	Sharpin	99	98.780	MGP_SPRETEiJ_G0020825	Sharpin	100	98.780	Mus_spretus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004842	ubiquitin-protein transferase activity	21873635.	IBA	Function
GO:0005515	protein binding	20956555.21455180.21455181.23942237.	IPI	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0007005	mitochondrion organization	7792947.	IMP	Process
GO:0008544	epidermis development	7792947.	IMP	Process
GO:0010803	regulation of tumor necrosis factor-mediated signaling pathway	21455173.21455180.	IMP	Process
GO:0010803	regulation of tumor necrosis factor-mediated signaling pathway	-	ISO	Process
GO:0014069	postsynaptic density	-	ISO	Component
GO:0030054	cell junction	-	IEA	Component
GO:0030262	apoptotic nuclear changes	7792947.	IMP	Process
GO:0030425	dendrite	-	ISO	Component
GO:0031424	keratinization	7792947.	IMP	Process
GO:0031593	polyubiquitin modification-dependent protein binding	-	ISO	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	21873635.	IBA	Process
GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	21455173.21455180.	IMP	Process
GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	-	ISO	Process
GO:0043130	ubiquitin binding	21873635.	IBA	Function
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0045202	synapse	-	IEA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0050728	negative regulation of inflammatory response	21455173.21455180.	IMP	Process
GO:0051260	protein homooligomerization	-	ISO	Process
GO:0071797	LUBAC complex	21873635.	IBA	Component
GO:0071797	LUBAC complex	-	ISO	Component
GO:0097039	protein linear polyubiquitination	21873635.	IBA	Process
GO:0097039	protein linear polyubiquitination	-	ISO	Process
GO:2000348	regulation of CD40 signaling pathway	-	ISO	Process