EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022557 (Gene tree)
Gene ID: 12181
Gene Symbol: Bop1
Alias: Erb1p
Full Name: block of proliferation 1
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 24289 bases
Position: chr15:76452989-76477277
Accession: 1334460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000023217	BOP1NT	PF08145.12	2.7e-110	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000229633	-	683	-	-	- (aa)	-	-
ENSMUST00000023217	-	2491	-	ENSMUSP00000023217	732 (aa)	-	P97452
ENSMUST00000229897	-	657	-	-	- (aa)	-	-
ENSMUST00000229132	-	697	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000022557's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022557's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022557	Bop1	95	86.246	ENSG00000261236	BOP1	100	82.574	Homo_sapiens
ENSMUSG00000022557	Bop1	93	65.211	ENSAPOG00000019208	bop1	98	63.901	Acanthochromis_polyacanthus
ENSMUSG00000022557	Bop1	93	79.420	ENSAMEG00000005886	BOP1	97	80.146	Ailuropoda_melanoleuca
ENSMUSG00000022557	Bop1	94	63.803	ENSACIG00000007313	bop1	99	63.546	Amphilophus_citrinellus
ENSMUSG00000022557	Bop1	86	69.365	ENSAOCG00000016222	bop1	93	65.562	Amphiprion_ocellaris
ENSMUSG00000022557	Bop1	86	69.206	ENSAPEG00000018843	bop1	92	64.740	Amphiprion_percula
ENSMUSG00000022557	Bop1	86	68.987	ENSATEG00000010331	bop1	97	62.700	Anabas_testudineus
ENSMUSG00000022557	Bop1	77	66.202	ENSAPLG00000008324	BOP1	99	66.259	Anas_platyrhynchos
ENSMUSG00000022557	Bop1	95	86.390	ENSANAG00000035474	BOP1	92	86.483	Aotus_nancymaae
ENSMUSG00000022557	Bop1	86	69.048	ENSACLG00000005923	bop1	96	68.659	Astatotilapia_calliptera
ENSMUSG00000022557	Bop1	77	70.194	ENSAMXG00000011549	bop1	87	70.194	Astyanax_mexicanus
ENSMUSG00000022557	Bop1	95	83.119	ENSBTAG00000009811	BOP1	91	83.480	Bos_taurus
ENSMUSG00000022557	Bop1	86	47.559	WBGene00012978	Y48B6A.1	91	46.870	Caenorhabditis_elegans
ENSMUSG00000022557	Bop1	90	83.988	ENSCJAG00000021437	BOP1	83	84.202	Callithrix_jacchus
ENSMUSG00000022557	Bop1	98	77.241	ENSCAFG00000001554	BOP1	92	79.562	Canis_familiaris
ENSMUSG00000022557	Bop1	95	77.175	ENSCHIG00000013489	BOP1	92	77.259	Capra_hircus
ENSMUSG00000022557	Bop1	100	83.131	ENSTSYG00000035588	BOP1	100	82.861	Carlito_syrichta
ENSMUSG00000022557	Bop1	84	91.086	ENSCAPG00000005636	BOP1	96	91.057	Cavia_aperea
ENSMUSG00000022557	Bop1	98	85.992	ENSCPOG00000005456	BOP1	93	87.299	Cavia_porcellus
ENSMUSG00000022557	Bop1	95	87.000	ENSCCAG00000028318	BOP1	92	86.919	Cebus_capucinus
ENSMUSG00000022557	Bop1	95	85.817	ENSCATG00000032450	BOP1	100	82.172	Cercocebus_atys
ENSMUSG00000022557	Bop1	100	84.605	ENSCLAG00000010297	BOP1	100	84.605	Chinchilla_lanigera
ENSMUSG00000022557	Bop1	95	86.083	ENSCSAG00000008653	BOP1	100	82.416	Chlorocebus_sabaeus
ENSMUSG00000022557	Bop1	98	70.862	ENSCPBG00000018884	BOP1	95	72.246	Chrysemys_picta_bellii
ENSMUSG00000022557	Bop1	95	51.429	ENSCING00000006069	-	94	54.035	Ciona_intestinalis
ENSMUSG00000022557	Bop1	85	58.294	ENSCSAVG00000006653	-	100	57.027	Ciona_savignyi
ENSMUSG00000022557	Bop1	95	84.758	ENSCANG00000038730	BOP1	94	85.320	Colobus_angolensis_palliatus
ENSMUSG00000022557	Bop1	100	92.213	ENSCGRG00001022601	BOP1	100	92.213	Cricetulus_griseus_chok1gshd
ENSMUSG00000022557	Bop1	100	92.213	ENSCGRG00000012159	Bop1	100	92.213	Cricetulus_griseus_crigri
ENSMUSG00000022557	Bop1	95	64.368	ENSCSEG00000018121	bop1	95	65.015	Cynoglossus_semilaevis
ENSMUSG00000022557	Bop1	86	68.780	ENSCVAG00000023063	bop1	92	63.752	Cyprinodon_variegatus
ENSMUSG00000022557	Bop1	98	64.286	ENSDARG00000063627	bop1	93	65.706	Danio_rerio
ENSMUSG00000022557	Bop1	95	80.228	ENSDNOG00000047347	BOP1	92	80.029	Dasypus_novemcinctus
ENSMUSG00000022557	Bop1	95	86.455	ENSDORG00000004860	Bop1	99	86.404	Dipodomys_ordii
ENSMUSG00000022557	Bop1	92	51.971	FBgn0028744	CG5033	90	50.774	Drosophila_melanogaster
ENSMUSG00000022557	Bop1	86	66.614	ENSEBUG00000003348	bop1	96	67.480	Eptatretus_burgeri
ENSMUSG00000022557	Bop1	100	82.369	ENSEASG00005010217	BOP1	92	85.693	Equus_asinus_asinus
ENSMUSG00000022557	Bop1	100	82.369	ENSECAG00000016440	BOP1	83	85.839	Equus_caballus
ENSMUSG00000022557	Bop1	72	84.659	ENSEEUG00000005437	BOP1	100	84.659	Erinaceus_europaeus
ENSMUSG00000022557	Bop1	86	71.019	ENSELUG00000022099	bop1	93	65.068	Esox_lucius
ENSMUSG00000022557	Bop1	95	84.029	ENSFCAG00000022942	BOP1	100	80.728	Felis_catus
ENSMUSG00000022557	Bop1	77	67.434	ENSFALG00000000360	BOP1	100	67.434	Ficedula_albicollis
ENSMUSG00000022557	Bop1	96	88.527	ENSFDAG00000015755	BOP1	98	88.792	Fukomys_damarensis
ENSMUSG00000022557	Bop1	72	69.057	ENSFHEG00000017233	bop1	88	69.434	Fundulus_heteroclitus
ENSMUSG00000022557	Bop1	84	66.019	ENSGMOG00000000569	bop1	99	65.964	Gadus_morhua
ENSMUSG00000022557	Bop1	96	69.650	ENSGALG00000053353	BOP1	97	71.799	Gallus_gallus
ENSMUSG00000022557	Bop1	97	65.874	ENSGAFG00000011248	bop1	94	65.262	Gambusia_affinis
ENSMUSG00000022557	Bop1	95	65.335	ENSGACG00000010420	bop1	96	68.224	Gasterosteus_aculeatus
ENSMUSG00000022557	Bop1	98	71.409	ENSGAGG00000012770	BOP1	95	72.818	Gopherus_agassizii
ENSMUSG00000022557	Bop1	96	85.133	ENSGGOG00000013590	BOP1	96	86.628	Gorilla_gorilla
ENSMUSG00000022557	Bop1	86	69.304	ENSHBUG00000013186	bop1	94	66.134	Haplochromis_burtoni
ENSMUSG00000022557	Bop1	98	86.501	ENSHGLG00000017934	BOP1	93	89.343	Heterocephalus_glaber_female
ENSMUSG00000022557	Bop1	96	87.870	ENSHGLG00100007897	BOP1	97	87.865	Heterocephalus_glaber_male
ENSMUSG00000022557	Bop1	95	64.040	ENSHCOG00000018713	bop1	92	64.877	Hippocampus_comes
ENSMUSG00000022557	Bop1	98	64.721	ENSIPUG00000012277	bop1	93	65.508	Ictalurus_punctatus
ENSMUSG00000022557	Bop1	95	88.184	ENSSTOG00000020925	BOP1	98	85.048	Ictidomys_tridecemlineatus
ENSMUSG00000022557	Bop1	99	84.973	ENSJJAG00000003954	Bop1	96	88.158	Jaculus_jaculus
ENSMUSG00000022557	Bop1	86	70.095	ENSKMAG00000001743	bop1	98	65.167	Kryptolebias_marmoratus
ENSMUSG00000022557	Bop1	95	66.094	ENSLBEG00000023751	-	90	65.847	Labrus_bergylta
ENSMUSG00000022557	Bop1	95	65.854	ENSLBEG00000022444	bop1	90	65.797	Labrus_bergylta
ENSMUSG00000022557	Bop1	87	72.642	ENSLACG00000013738	BOP1	95	67.452	Latimeria_chalumnae
ENSMUSG00000022557	Bop1	84	72.078	ENSLOCG00000007429	bop1	99	72.033	Lepisosteus_oculatus
ENSMUSG00000022557	Bop1	96	77.652	ENSLAFG00000000686	BOP1	99	78.894	Loxodonta_africana
ENSMUSG00000022557	Bop1	95	85.817	ENSMFAG00000031321	BOP1	95	86.047	Macaca_fascicularis
ENSMUSG00000022557	Bop1	95	85.530	ENSMMUG00000014724	BOP1	99	82.585	Macaca_mulatta
ENSMUSG00000022557	Bop1	95	72.507	ENSMNEG00000040269	BOP1	98	70.365	Macaca_nemestrina
ENSMUSG00000022557	Bop1	96	84.572	ENSMLEG00000039202	BOP1	96	86.047	Mandrillus_leucophaeus
ENSMUSG00000022557	Bop1	99	63.859	ENSMAMG00000022191	bop1	95	64.441	Mastacembelus_armatus
ENSMUSG00000022557	Bop1	93	65.843	ENSMZEG00005011990	bop1	94	64.971	Maylandia_zebra
ENSMUSG00000022557	Bop1	96	87.749	ENSMAUG00000012534	Bop1	97	87.865	Mesocricetus_auratus
ENSMUSG00000022557	Bop1	100	81.402	ENSMICG00000015653	BOP1	92	84.795	Microcebus_murinus
ENSMUSG00000022557	Bop1	100	91.144	ENSMOCG00000011668	Bop1	100	91.008	Microtus_ochrogaster
ENSMUSG00000022557	Bop1	95	61.790	ENSMMOG00000017547	bop1	99	62.049	Mola_mola
ENSMUSG00000022557	Bop1	98	75.886	ENSMODG00000010589	BOP1	84	78.229	Monodelphis_domestica
ENSMUSG00000022557	Bop1	96	62.569	ENSMALG00000011552	bop1	92	63.418	Monopterus_albus
ENSMUSG00000022557	Bop1	100	98.497	MGP_CAROLIEiJ_G0019928	Bop1	100	98.497	Mus_caroli
ENSMUSG00000022557	Bop1	100	96.585	MGP_PahariEiJ_G0019938	Bop1	100	96.585	Mus_pahari
ENSMUSG00000022557	Bop1	100	98.634	MGP_SPRETEiJ_G0020831	Bop1	100	98.634	Mus_spretus
ENSMUSG00000022557	Bop1	99	81.806	ENSMPUG00000006831	BOP1	99	81.806	Mustela_putorius_furo
ENSMUSG00000022557	Bop1	96	86.261	ENSMLUG00000030120	BOP1	96	87.281	Myotis_lucifugus
ENSMUSG00000022557	Bop1	84	92.220	ENSNGAG00000009053	Bop1	98	92.358	Nannospalax_galili
ENSMUSG00000022557	Bop1	94	60.870	ENSNBRG00000021004	bop1	99	60.913	Neolamprologus_brichardi
ENSMUSG00000022557	Bop1	84	83.442	ENSMEUG00000000450	BOP1	82	83.415	Notamacropus_eugenii
ENSMUSG00000022557	Bop1	100	85.040	ENSODEG00000013361	BOP1	100	84.501	Octodon_degus
ENSMUSG00000022557	Bop1	85	68.998	ENSONIG00000015336	bop1	94	65.988	Oreochromis_niloticus
ENSMUSG00000022557	Bop1	92	66.322	ENSORLG00000001674	bop1	93	65.324	Oryzias_latipes
ENSMUSG00000022557	Bop1	92	66.322	ENSORLG00020010315	bop1	93	65.324	Oryzias_latipes_hni
ENSMUSG00000022557	Bop1	92	66.174	ENSORLG00015017381	bop1	93	65.180	Oryzias_latipes_hsok
ENSMUSG00000022557	Bop1	90	66.817	ENSOMEG00000009341	bop1	93	65.991	Oryzias_melastigma
ENSMUSG00000022557	Bop1	95	85.612	ENSOGAG00000017175	BOP1	93	85.526	Otolemur_garnettii
ENSMUSG00000022557	Bop1	79	76.190	ENSOARG00000014255	BOP1	93	70.042	Ovis_aries
ENSMUSG00000022557	Bop1	96	85.133	ENSPPAG00000043028	BOP1	96	86.483	Pan_paniscus
ENSMUSG00000022557	Bop1	88	83.513	ENSPPRG00000008442	BOP1	99	83.513	Panthera_pardus
ENSMUSG00000022557	Bop1	95	86.390	ENSPTRG00000020690	BOP1	100	82.574	Pan_troglodytes
ENSMUSG00000022557	Bop1	95	85.673	ENSPANG00000024950	BOP1	100	82.038	Papio_anubis
ENSMUSG00000022557	Bop1	95	68.414	ENSPKIG00000020273	bop1	73	73.659	Paramormyrops_kingsleyae
ENSMUSG00000022557	Bop1	94	63.467	ENSPMGG00000023998	bop1	97	63.097	Periophthalmus_magnuspinnatus
ENSMUSG00000022557	Bop1	84	71.475	ENSPMAG00000004108	bop1	99	71.545	Petromyzon_marinus
ENSMUSG00000022557	Bop1	98	75.853	ENSPCIG00000009070	BOP1	91	78.374	Phascolarctos_cinereus
ENSMUSG00000022557	Bop1	97	65.181	ENSPFOG00000007988	bop1	92	65.801	Poecilia_formosa
ENSMUSG00000022557	Bop1	95	65.043	ENSPLAG00000006820	bop1	94	64.826	Poecilia_latipinna
ENSMUSG00000022557	Bop1	95	65.186	ENSPMEG00000015671	bop1	91	64.971	Poecilia_mexicana
ENSMUSG00000022557	Bop1	95	66.195	ENSPREG00000015440	bop1	92	66.571	Poecilia_reticulata
ENSMUSG00000022557	Bop1	77	89.165	ENSPPYG00000029621	-	99	89.165	Pongo_abelii
ENSMUSG00000022557	Bop1	100	79.839	ENSPCAG00000006873	BOP1	92	83.090	Procavia_capensis
ENSMUSG00000022557	Bop1	93	85.401	ENSPCOG00000023196	BOP1	92	85.401	Propithecus_coquereli
ENSMUSG00000022557	Bop1	84	68.871	ENSPNYG00000010914	bop1	98	64.544	Pundamilia_nyererei
ENSMUSG00000022557	Bop1	98	62.565	ENSPNAG00000008525	bop1	90	63.599	Pygocentrus_nattereri
ENSMUSG00000022557	Bop1	100	93.716	ENSRNOG00000021773	Bop1	100	93.716	Rattus_norvegicus
ENSMUSG00000022557	Bop1	95	84.814	ENSRBIG00000027555	BOP1	100	81.233	Rhinopithecus_bieti
ENSMUSG00000022557	Bop1	88	83.951	ENSRROG00000043244	BOP1	91	84.169	Rhinopithecus_roxellana
ENSMUSG00000022557	Bop1	85	40.868	YMR049C	-	81	41.400	Saccharomyces_cerevisiae
ENSMUSG00000022557	Bop1	95	85.960	ENSSBOG00000030140	BOP1	91	85.901	Saimiri_boliviensis_boliviensis
ENSMUSG00000022557	Bop1	85	82.692	ENSSHAG00000000887	BOP1	99	83.089	Sarcophilus_harrisii
ENSMUSG00000022557	Bop1	90	71.061	ENSSFOG00015010596	bop1	99	70.992	Scleropages_formosus
ENSMUSG00000022557	Bop1	96	65.455	ENSSMAG00000014623	bop1	92	66.379	Scophthalmus_maximus
ENSMUSG00000022557	Bop1	84	68.821	ENSSDUG00000021097	bop1	99	64.826	Seriola_dumerili
ENSMUSG00000022557	Bop1	85	69.489	ENSSLDG00000001209	bop1	98	64.680	Seriola_lalandi_dorsalis
ENSMUSG00000022557	Bop1	91	67.857	ENSSPUG00000017700	BOP1	99	67.857	Sphenodon_punctatus
ENSMUSG00000022557	Bop1	84	66.667	ENSSPAG00000013925	bop1	98	62.899	Stegastes_partitus
ENSMUSG00000022557	Bop1	96	83.618	ENSSSCG00000005920	BOP1	99	86.335	Sus_scrofa
ENSMUSG00000022557	Bop1	95	66.384	ENSTNIG00000018156	bop1	98	66.619	Tetraodon_nigroviridis
ENSMUSG00000022557	Bop1	85	85.586	ENSTTRG00000006423	BOP1	96	74.344	Tursiops_truncatus
ENSMUSG00000022557	Bop1	84	87.844	ENSVVUG00000007851	BOP1	91	87.967	Vulpes_vulpes
ENSMUSG00000022557	Bop1	95	62.751	ENSXCOG00000019431	bop1	94	62.500	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	-	ISO	Process
GO:0000448	cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	17353269.	IMP	Process
GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	-	ISO	Process
GO:0005515	protein binding	15225545.17353269.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	17353269.	IDA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0006364	rRNA processing	15225545.	IGI	Process
GO:0006364	rRNA processing	10891491.	IMP	Process
GO:0008283	cell proliferation	17353269.	IMP	Process
GO:0030687	preribosome, large subunit precursor	21873635.	IBA	Component
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0042273	ribosomal large subunit biogenesis	10891491.	IMP	Process
GO:0043021	ribonucleoprotein complex binding	21873635.	IBA	Function
GO:0043021	ribonucleoprotein complex binding	10891491.	IDA	Function
GO:0051726	regulation of cell cycle	-	ISO	Process
GO:0070545	PeBoW complex	21873635.	IBA	Component
GO:0070545	PeBoW complex	-	ISO	Component
GO:1901796	regulation of signal transduction by p53 class mediator	-	ISO	Process
GO:1990904	ribonucleoprotein complex	18809582.	ISO	Component