EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022676 (Gene tree)
Gene ID: 20583
Gene Symbol: Snai2
Alias: Slug|Slugh|Snail2
Full Name: snail family zinc finger 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 3534 bases
Position: chr16:14705852-14709385
Accession: 1096393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000023356	zf-C2H2	PF00096.26	2.1e-27	1	5
ENSMUSP00000023356	zf-C2H2	PF00096.26	2.1e-27	2	5
ENSMUSP00000023356	zf-C2H2	PF00096.26	2.1e-27	3	5
ENSMUSP00000023356	zf-C2H2	PF00096.26	2.1e-27	4	5
ENSMUSP00000023356	zf-C2H2	PF00096.26	2.1e-27	5	5
ENSMUSP00000023356	zf-met	PF12874.7	4.1e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000023356	-	2021	-	ENSMUSP00000023356	269 (aa)	-	P97469

Gene Model

Click here to download ENSMUSG00000022676's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04390	Hippo signaling pathway	KEGG
mmu04520	Adherens junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000022676	Snai2	99	46.599	ENSMUSG00000006587	Snai3	99	46.552
ENSMUSG00000022676	Snai2	99	52.708	ENSMUSG00000042821	Snai1	98	53.650

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022676	Snai2	100	95.167	ENSG00000019549	SNAI2	100	95.167	Homo_sapiens
ENSMUSG00000022676	Snai2	99	48.630	ENSG00000185669	SNAI3	99	49.655	Homo_sapiens
ENSMUSG00000022676	Snai2	100	95.911	ENSAMEG00000009606	SNAI2	100	95.911	Ailuropoda_melanoleuca
ENSMUSG00000022676	Snai2	99	47.697	ENSANAG00000032748	SNAI3	99	46.624	Aotus_nancymaae
ENSMUSG00000022676	Snai2	100	94.424	ENSANAG00000021163	SNAI2	100	94.424	Aotus_nancymaae
ENSMUSG00000022676	Snai2	100	91.450	ENSBTAG00000013227	SNAI2	100	91.450	Bos_taurus
ENSMUSG00000022676	Snai2	99	45.270	ENSBTAG00000017528	SNAI3	99	46.622	Bos_taurus
ENSMUSG00000022676	Snai2	100	95.167	ENSCJAG00000013499	SNAI2	100	95.167	Callithrix_jacchus
ENSMUSG00000022676	Snai2	99	48.980	ENSCAFG00000029458	SNAI3	99	48.973	Canis_familiaris
ENSMUSG00000022676	Snai2	100	95.167	ENSCAFG00000006638	SNAI2	100	95.167	Canis_familiaris
ENSMUSG00000022676	Snai2	99	49.320	ENSCAFG00020004719	SNAI3	99	49.315	Canis_lupus_dingo
ENSMUSG00000022676	Snai2	100	95.167	ENSCAFG00020015384	SNAI2	100	95.167	Canis_lupus_dingo
ENSMUSG00000022676	Snai2	99	46.205	ENSCHIG00000018087	SNAI3	99	46.844	Capra_hircus
ENSMUSG00000022676	Snai2	100	91.078	ENSCHIG00000024410	SNAI2	100	91.078	Capra_hircus
ENSMUSG00000022676	Snai2	90	94.628	ENSTSYG00000030892	SNAI2	90	94.628	Carlito_syrichta
ENSMUSG00000022676	Snai2	57	68.750	ENSTSYG00000025594	SNAI3	55	68.750	Carlito_syrichta
ENSMUSG00000022676	Snai2	83	94.643	ENSCAPG00000013078	SNAI2	100	94.643	Cavia_aperea
ENSMUSG00000022676	Snai2	100	95.167	ENSCCAG00000024100	SNAI2	100	95.167	Cebus_capucinus
ENSMUSG00000022676	Snai2	99	49.831	ENSCATG00000031714	SNAI3	99	48.013	Cercocebus_atys
ENSMUSG00000022676	Snai2	100	95.167	ENSCATG00000028656	SNAI2	100	95.167	Cercocebus_atys
ENSMUSG00000022676	Snai2	100	96.283	ENSCLAG00000011797	SNAI2	100	96.283	Chinchilla_lanigera
ENSMUSG00000022676	Snai2	100	95.167	ENSCSAG00000014787	SNAI2	100	95.167	Chlorocebus_sabaeus
ENSMUSG00000022676	Snai2	99	52.525	ENSCPBG00000023474	SNAI3	99	52.525	Chrysemys_picta_bellii
ENSMUSG00000022676	Snai2	100	91.822	ENSCPBG00000020255	SNAI2	100	91.822	Chrysemys_picta_bellii
ENSMUSG00000022676	Snai2	50	65.672	ENSCSAVG00000009819	-	69	65.672	Ciona_savignyi
ENSMUSG00000022676	Snai2	100	95.167	ENSCANG00000029656	SNAI2	100	95.167	Colobus_angolensis_palliatus
ENSMUSG00000022676	Snai2	99	47.751	ENSCGRG00001011389	Snai3	99	48.084	Cricetulus_griseus_chok1gshd
ENSMUSG00000022676	Snai2	100	97.026	ENSCGRG00001013674	Snai2	100	97.026	Cricetulus_griseus_chok1gshd
ENSMUSG00000022676	Snai2	100	97.026	ENSCGRG00000012119	Snai2	100	97.026	Cricetulus_griseus_crigri
ENSMUSG00000022676	Snai2	99	47.751	ENSCGRG00000014932	Snai3	99	48.084	Cricetulus_griseus_crigri
ENSMUSG00000022676	Snai2	78	34.685	ENSDNOG00000035204	-	100	34.375	Dasypus_novemcinctus
ENSMUSG00000022676	Snai2	100	92.565	ENSDORG00000029620	Snai2	100	92.565	Dipodomys_ordii
ENSMUSG00000022676	Snai2	99	50.172	ENSECAG00000012131	SNAI3	99	49.333	Equus_caballus
ENSMUSG00000022676	Snai2	100	78.439	ENSELUG00000021795	SNAI2	79	79.926	Esox_lucius
ENSMUSG00000022676	Snai2	99	57.439	ENSELUG00000018742	-	99	56.747	Esox_lucius
ENSMUSG00000022676	Snai2	99	46.931	ENSFCAG00000043885	SNAI3	99	46.931	Felis_catus
ENSMUSG00000022676	Snai2	89	64.017	ENSFALG00000012974	-	98	64.854	Ficedula_albicollis
ENSMUSG00000022676	Snai2	100	95.911	ENSFDAG00000016958	SNAI2	100	95.911	Fukomys_damarensis
ENSMUSG00000022676	Snai2	100	91.822	ENSGAGG00000000426	SNAI2	100	91.822	Gopherus_agassizii
ENSMUSG00000022676	Snai2	99	53.220	ENSGAGG00000023571	SNAI3	99	53.401	Gopherus_agassizii
ENSMUSG00000022676	Snai2	100	95.167	ENSGGOG00000000959	SNAI2	100	95.167	Gorilla_gorilla
ENSMUSG00000022676	Snai2	99	49.831	ENSGGOG00000012559	SNAI3	99	48.630	Gorilla_gorilla
ENSMUSG00000022676	Snai2	100	74.074	ENSHCOG00000019435	SNAI2	100	73.704	Hippocampus_comes
ENSMUSG00000022676	Snai2	100	69.888	ENSIPUG00000000131	snai2	100	69.145	Ictalurus_punctatus
ENSMUSG00000022676	Snai2	100	95.539	ENSSTOG00000028743	SNAI2	100	95.539	Ictidomys_tridecemlineatus
ENSMUSG00000022676	Snai2	99	49.147	ENSJJAG00000019934	Snai3	99	47.297	Jaculus_jaculus
ENSMUSG00000022676	Snai2	100	86.617	ENSLOCG00000005992	SNAI2	100	86.617	Lepisosteus_oculatus
ENSMUSG00000022676	Snai2	52	86.429	ENSLOCG00000004887	SNAI3	97	80.503	Lepisosteus_oculatus
ENSMUSG00000022676	Snai2	99	56.985	ENSLAFG00000005117	SNAI3	99	56.985	Loxodonta_africana
ENSMUSG00000022676	Snai2	100	93.680	ENSLAFG00000009299	SNAI2	100	93.680	Loxodonta_africana
ENSMUSG00000022676	Snai2	100	95.167	ENSMFAG00000046061	SNAI2	100	95.167	Macaca_fascicularis
ENSMUSG00000022676	Snai2	99	50.169	ENSMFAG00000032064	SNAI3	99	47.588	Macaca_fascicularis
ENSMUSG00000022676	Snai2	99	50.169	ENSMMUG00000008716	SNAI3	99	47.588	Macaca_mulatta
ENSMUSG00000022676	Snai2	100	95.167	ENSMMUG00000016195	SNAI2	100	95.167	Macaca_mulatta
ENSMUSG00000022676	Snai2	100	95.167	ENSMNEG00000034216	SNAI2	100	95.167	Macaca_nemestrina
ENSMUSG00000022676	Snai2	99	50.169	ENSMNEG00000045515	SNAI3	99	48.675	Macaca_nemestrina
ENSMUSG00000022676	Snai2	100	95.167	ENSMLEG00000034407	SNAI2	100	95.167	Mandrillus_leucophaeus
ENSMUSG00000022676	Snai2	100	96.654	ENSMAUG00000008119	Snai2	100	96.654	Mesocricetus_auratus
ENSMUSG00000022676	Snai2	99	47.099	ENSMAUG00000001685	Snai3	99	47.099	Mesocricetus_auratus
ENSMUSG00000022676	Snai2	100	96.283	ENSMOCG00000006622	Snai2	100	96.283	Microtus_ochrogaster
ENSMUSG00000022676	Snai2	99	48.097	ENSMOCG00000003536	Snai3	99	46.503	Microtus_ochrogaster
ENSMUSG00000022676	Snai2	100	92.937	ENSMODG00000010173	SNAI2	100	92.937	Monodelphis_domestica
ENSMUSG00000022676	Snai2	100	99.257	MGP_CAROLIEiJ_G0020483	Snai2	100	99.257	Mus_caroli
ENSMUSG00000022676	Snai2	99	45.918	MGP_CAROLIEiJ_G0031662	Snai3	99	45.862	Mus_caroli
ENSMUSG00000022676	Snai2	100	99.257	MGP_PahariEiJ_G0016188	Snai2	100	99.257	Mus_pahari
ENSMUSG00000022676	Snai2	99	47.099	MGP_PahariEiJ_G0023260	Snai3	99	47.059	Mus_pahari
ENSMUSG00000022676	Snai2	100	99.628	MGP_SPRETEiJ_G0021379	Snai2	100	99.628	Mus_spretus
ENSMUSG00000022676	Snai2	99	46.599	MGP_SPRETEiJ_G0032780	Snai3	99	46.552	Mus_spretus
ENSMUSG00000022676	Snai2	99	48.805	ENSMPUG00000008104	SNAI3	99	48.986	Mustela_putorius_furo
ENSMUSG00000022676	Snai2	100	95.911	ENSMPUG00000010793	SNAI2	100	95.911	Mustela_putorius_furo
ENSMUSG00000022676	Snai2	100	94.424	ENSMLUG00000001086	SNAI2	100	94.424	Myotis_lucifugus
ENSMUSG00000022676	Snai2	99	46.309	ENSNGAG00000023039	Snai3	99	47.260	Nannospalax_galili
ENSMUSG00000022676	Snai2	99	50.169	ENSNLEG00000000595	SNAI3	99	46.945	Nomascus_leucogenys
ENSMUSG00000022676	Snai2	100	95.167	ENSNLEG00000013421	SNAI2	100	95.167	Nomascus_leucogenys
ENSMUSG00000022676	Snai2	97	92.748	ENSMEUG00000009510	SNAI2	100	92.748	Notamacropus_eugenii
ENSMUSG00000022676	Snai2	100	92.565	ENSOANG00000007267	SNAI2	100	92.565	Ornithorhynchus_anatinus
ENSMUSG00000022676	Snai2	99	48.084	ENSOGAG00000000419	SNAI3	99	47.945	Otolemur_garnettii
ENSMUSG00000022676	Snai2	100	91.078	ENSOARG00000013030	SNAI2	100	91.078	Ovis_aries
ENSMUSG00000022676	Snai2	100	95.167	ENSPPAG00000015662	SNAI2	100	95.167	Pan_paniscus
ENSMUSG00000022676	Snai2	99	49.492	ENSPPAG00000043301	SNAI3	99	48.288	Pan_paniscus
ENSMUSG00000022676	Snai2	100	95.167	ENSPPRG00000012562	-	100	95.167	Panthera_pardus
ENSMUSG00000022676	Snai2	99	46.931	ENSPPRG00000008511	SNAI3	99	46.931	Panthera_pardus
ENSMUSG00000022676	Snai2	90	94.650	ENSPTIG00000007593	SNAI2	77	94.650	Panthera_tigris_altaica
ENSMUSG00000022676	Snai2	100	95.167	ENSPTRG00000020235	SNAI2	100	95.167	Pan_troglodytes
ENSMUSG00000022676	Snai2	99	49.492	ENSPTRG00000008460	SNAI3	99	46.624	Pan_troglodytes
ENSMUSG00000022676	Snai2	99	50.169	ENSPANG00000000509	SNAI3	99	47.588	Papio_anubis
ENSMUSG00000022676	Snai2	100	95.167	ENSPANG00000017540	SNAI2	100	95.167	Papio_anubis
ENSMUSG00000022676	Snai2	99	55.172	ENSPKIG00000007872	SNAI3	99	53.020	Paramormyrops_kingsleyae
ENSMUSG00000022676	Snai2	100	82.528	ENSPKIG00000002254	SNAI2	100	85.502	Paramormyrops_kingsleyae
ENSMUSG00000022676	Snai2	100	91.450	ENSPSIG00000016395	SNAI2	100	91.450	Pelodiscus_sinensis
ENSMUSG00000022676	Snai2	86	58.120	ENSPSIG00000004262	SNAI3	56	80.986	Pelodiscus_sinensis
ENSMUSG00000022676	Snai2	100	75.836	ENSPMGG00000013179	SNAI2	100	77.323	Periophthalmus_magnuspinnatus
ENSMUSG00000022676	Snai2	100	96.654	ENSPEMG00000011739	Snai2	100	96.654	Peromyscus_maniculatus_bairdii
ENSMUSG00000022676	Snai2	100	93.309	ENSPCIG00000025156	SNAI2	100	93.309	Phascolarctos_cinereus
ENSMUSG00000022676	Snai2	90	80.247	ENSPREG00000008528	SNAI2	86	78.601	Poecilia_reticulata
ENSMUSG00000022676	Snai2	100	95.167	ENSPPYG00000018578	SNAI2	100	95.167	Pongo_abelii
ENSMUSG00000022676	Snai2	99	49.013	ENSPPYG00000007643	SNAI3	99	46.945	Pongo_abelii
ENSMUSG00000022676	Snai2	100	95.539	ENSPCOG00000015656	SNAI2	100	95.539	Propithecus_coquereli
ENSMUSG00000022676	Snai2	100	94.796	ENSPVAG00000009457	SNAI2	100	94.796	Pteropus_vampyrus
ENSMUSG00000022676	Snai2	99	45.734	ENSRNOG00000013586	Snai3	99	46.897	Rattus_norvegicus
ENSMUSG00000022676	Snai2	100	95.167	ENSRBIG00000041133	SNAI2	100	95.167	Rhinopithecus_bieti
ENSMUSG00000022676	Snai2	99	49.495	ENSRBIG00000025770	SNAI3	99	47.910	Rhinopithecus_bieti
ENSMUSG00000022676	Snai2	100	95.167	ENSRROG00000032273	SNAI2	100	95.167	Rhinopithecus_roxellana
ENSMUSG00000022676	Snai2	99	47.557	ENSRROG00000032757	SNAI3	99	47.588	Rhinopithecus_roxellana
ENSMUSG00000022676	Snai2	100	95.167	ENSSBOG00000035774	SNAI2	100	95.167	Saimiri_boliviensis_boliviensis
ENSMUSG00000022676	Snai2	100	93.309	ENSSHAG00000004205	SNAI2	100	93.309	Sarcophilus_harrisii
ENSMUSG00000022676	Snai2	99	49.511	ENSSFOG00015016115	snai3	93	50.327	Scleropages_formosus
ENSMUSG00000022676	Snai2	100	81.181	ENSSFOG00015018025	SNAI2	100	84.133	Scleropages_formosus
ENSMUSG00000022676	Snai2	100	91.078	ENSSPUG00000005427	-	100	91.078	Sphenodon_punctatus
ENSMUSG00000022676	Snai2	100	92.565	ENSSSCG00000039568	SNAI2	100	92.565	Sus_scrofa
ENSMUSG00000022676	Snai2	99	46.367	ENSTTRG00000006262	SNAI3	99	47.203	Tursiops_truncatus
ENSMUSG00000022676	Snai2	86	95.238	ENSUAMG00000014942	SNAI2	100	95.238	Ursus_americanus
ENSMUSG00000022676	Snai2	99	50.519	ENSUAMG00000020030	SNAI3	99	47.386	Ursus_americanus
ENSMUSG00000022676	Snai2	98	95.455	ENSUMAG00000006525	SNAI2	100	95.455	Ursus_maritimus
ENSMUSG00000022676	Snai2	99	50.000	ENSVVUG00000003233	SNAI3	99	49.660	Vulpes_vulpes
ENSMUSG00000022676	Snai2	100	95.539	ENSVVUG00000017625	SNAI2	100	95.539	Vulpes_vulpes
ENSMUSG00000022676	Snai2	100	88.848	ENSXETG00000024006	snai2	100	88.848	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	18223155.	IDA	Process
GO:0000122	negative regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0000790	nuclear chromatin	-	ISO	Component
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	-	ISO	Function
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	18223155.	IDA	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	18663143.	IDA	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	16286009.	IGI	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	ISO	Function
GO:0001837	epithelial to mesenchymal transition	9182671.17916597.	IMP	Process
GO:0001837	epithelial to mesenchymal transition	-	ISO	Process
GO:0003198	epithelial to mesenchymal transition involved in endocardial cushion formation	18663143.	IMP	Process
GO:0003273	cell migration involved in endocardial cushion formation	18663143.	IMP	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003682	chromatin binding	17905753.	IDA	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0005515	protein binding	18331720.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	12833143.20046880.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	20046880.	IDA	Component
GO:0006355	regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0006933	negative regulation of cell adhesion involved in substrate-bound cell migration	18663143.	IMP	Process
GO:0007219	Notch signaling pathway	-	ISO	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007605	sensory perception of sound	12444107.	IMP	Process
GO:0007605	sensory perception of sound	-	ISO	Process
GO:0009314	response to radiation	12833143.	IDA	Process
GO:0009314	response to radiation	12833143.	IMP	Process
GO:0010839	negative regulation of keratinocyte proliferation	-	ISO	Process
GO:0010957	negative regulation of vitamin D biosynthetic process	-	ISO	Process
GO:0014032	neural crest cell development	-	ISO	Process
GO:0016477	cell migration	17376812.	IGI	Process
GO:0030335	positive regulation of cell migration	-	ISO	Process
GO:0032331	negative regulation of chondrocyte differentiation	-	ISO	Process
GO:0032642	regulation of chemokine production	-	ISO	Process
GO:0035066	positive regulation of histone acetylation	17905753.	IMP	Process
GO:0035921	desmosome disassembly	9182671.	IMP	Process
GO:0035921	desmosome disassembly	-	ISO	Process
GO:0036120	cellular response to platelet-derived growth factor stimulus	18663143.	TAS	Process
GO:0042981	regulation of apoptotic process	12833143.	IC	Process
GO:0043066	negative regulation of apoptotic process	16286009.	IGI	Process
GO:0043473	pigmentation	12444107.	IMP	Process
GO:0043473	pigmentation	-	ISO	Process
GO:0043518	negative regulation of DNA damage response, signal transduction by p53 class mediator	-	ISO	Process
GO:0043565	sequence-specific DNA binding	-	ISO	Function
GO:0044319	wound healing, spreading of cells	18663143.	TAS	Process
GO:0045600	positive regulation of fat cell differentiation	17905753.	IGI	Process
GO:0045600	positive regulation of fat cell differentiation	17905753.	IMP	Process
GO:0045667	regulation of osteoblast differentiation	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0050872	white fat cell differentiation	17905753.	IMP	Process
GO:0060021	roof of mouth development	17376812.	IGI	Process
GO:0060021	roof of mouth development	17376812.	IMP	Process
GO:0060429	epithelium development	18716062.	IMP	Process
GO:0060536	cartilage morphogenesis	17376812.	IGI	Process
GO:0060693	regulation of branching involved in salivary gland morphogenesis	20671187.	IMP	Process
GO:0070563	negative regulation of vitamin D receptor signaling pathway	-	ISO	Process
GO:0070888	E-box binding	-	ISO	Function
GO:0071364	cellular response to epidermal growth factor stimulus	-	ISO	Process
GO:0071479	cellular response to ionizing radiation	16286009.	IGI	Process
GO:0090090	negative regulation of canonical Wnt signaling pathway	-	ISO	Process
GO:1900387	negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter	-	ISO	Process
GO:1902230	negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage	-	ISO	Process
GO:2000647	negative regulation of stem cell proliferation	20032500.	IMP	Process
GO:2000810	regulation of bicellular tight junction assembly	-	ISO	Process
GO:2000811	negative regulation of anoikis	-	ISO	Process
GO:2001028	positive regulation of endothelial cell chemotaxis	18663143.	IC	Process
GO:2001240	negative regulation of extrinsic apoptotic signaling pathway in absence of ligand	10518215.	IDA	Process