EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022792 (Gene tree)
Gene ID: 70120
Gene Symbol: Yars2
Alias: 2210023C10Rik
Full Name: tyrosyl-tRNA synthetase 2 (mitochondrial)
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 6676 bases
Position: chr16:16302965-16309640
Accession: 1917370
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000055277	tRNA-synt_1b	PF00579.25	5.6e-72	1	1
ENSMUSP00000125252	tRNA-synt_1b	PF00579.25	1.3e-59	1	1
ENSMUSP00000125496	tRNA-synt_1b	PF00579.25	5.8e-05	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000159583	-	403	-	-	- (aa)	-	-
ENSMUST00000159962	-	2805	-	ENSMUSP00000125252	349 (aa)	-	E9PX65
ENSMUST00000162734	-	377	-	ENSMUSP00000125496	125 (aa)	-	F7BWC1
ENSMUST00000059955	-	1574	-	ENSMUSP00000055277	472 (aa)	-	Q8BYL4
ENSMUST00000161191	-	1412	-	-	- (aa)	-	-
ENSMUST00000159683	-	1528	-	ENSMUSP00000124606	349 (aa)	-	E9PX65

Gene Model

Click here to download ENSMUSG00000022792's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022792's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022792	Yars2	100	84.519	ENSG00000139131	YARS2	100	85.274	Homo_sapiens
ENSMUSG00000022792	Yars2	100	58.969	ENSAPOG00000008208	yars2	100	58.969	Acanthochromis_polyacanthus
ENSMUSG00000022792	Yars2	100	84.519	ENSAMEG00000008909	YARS2	100	84.519	Ailuropoda_melanoleuca
ENSMUSG00000022792	Yars2	94	60.181	ENSACIG00000018640	yars2	91	60.181	Amphilophus_citrinellus
ENSMUSG00000022792	Yars2	100	59.381	ENSAOCG00000005594	yars2	100	59.381	Amphiprion_ocellaris
ENSMUSG00000022792	Yars2	100	59.381	ENSAPEG00000006952	yars2	100	59.381	Amphiprion_percula
ENSMUSG00000022792	Yars2	100	58.351	ENSATEG00000019778	yars2	100	58.351	Anabas_testudineus
ENSMUSG00000022792	Yars2	99	54.225	ENSAPLG00000004982	YARS2	100	76.604	Anas_platyrhynchos
ENSMUSG00000022792	Yars2	100	64.780	ENSACAG00000012351	YARS2	97	64.780	Anolis_carolinensis
ENSMUSG00000022792	Yars2	96	87.168	ENSANAG00000026208	YARS2	95	87.168	Aotus_nancymaae
ENSMUSG00000022792	Yars2	100	58.776	ENSACLG00000026295	yars2	100	58.776	Astatotilapia_calliptera
ENSMUSG00000022792	Yars2	96	59.737	ENSAMXG00000015193	yars2	90	59.737	Astyanax_mexicanus
ENSMUSG00000022792	Yars2	100	85.146	ENSBTAG00000011399	YARS2	100	85.146	Bos_taurus
ENSMUSG00000022792	Yars2	85	35.194	WBGene00006968	yars-2	92	35.962	Caenorhabditis_elegans
ENSMUSG00000022792	Yars2	100	83.093	ENSCJAG00000018129	YARS2	100	83.093	Callithrix_jacchus
ENSMUSG00000022792	Yars2	100	86.611	ENSCAFG00000010496	YARS2	100	86.611	Canis_familiaris
ENSMUSG00000022792	Yars2	100	86.611	ENSCAFG00020019713	YARS2	100	86.611	Canis_lupus_dingo
ENSMUSG00000022792	Yars2	100	85.593	ENSCHIG00000002520	YARS2	100	85.593	Capra_hircus
ENSMUSG00000022792	Yars2	100	83.682	ENSTSYG00000013725	YARS2	100	83.682	Carlito_syrichta
ENSMUSG00000022792	Yars2	100	85.924	ENSCPOG00000015276	YARS2	100	85.924	Cavia_porcellus
ENSMUSG00000022792	Yars2	100	83.299	ENSCCAG00000038073	YARS2	100	83.299	Cebus_capucinus
ENSMUSG00000022792	Yars2	100	84.519	ENSCATG00000039275	YARS2	100	84.519	Cercocebus_atys
ENSMUSG00000022792	Yars2	100	87.212	ENSCLAG00000002000	YARS2	100	87.212	Chinchilla_lanigera
ENSMUSG00000022792	Yars2	100	84.100	ENSCSAG00000007382	YARS2	100	84.100	Chlorocebus_sabaeus
ENSMUSG00000022792	Yars2	100	83.090	ENSCHOG00000011749	YARS2	100	83.090	Choloepus_hoffmanni
ENSMUSG00000022792	Yars2	100	68.182	ENSCPBG00000020392	YARS2	100	68.182	Chrysemys_picta_bellii
ENSMUSG00000022792	Yars2	91	44.931	ENSCING00000007475	-	83	44.931	Ciona_intestinalis
ENSMUSG00000022792	Yars2	91	43.548	ENSCSAVG00000001469	-	93	43.548	Ciona_savignyi
ENSMUSG00000022792	Yars2	100	71.339	ENSCANG00000002599	YARS2	100	71.339	Colobus_angolensis_palliatus
ENSMUSG00000022792	Yars2	100	94.280	ENSCGRG00001019281	Yars2	100	94.280	Cricetulus_griseus_chok1gshd
ENSMUSG00000022792	Yars2	62	74.359	ENSCGRG00000012801	-	100	72.727	Cricetulus_griseus_crigri
ENSMUSG00000022792	Yars2	100	50.350	ENSCSEG00000009212	yars2	97	66.887	Cynoglossus_semilaevis
ENSMUSG00000022792	Yars2	94	62.640	ENSCVAG00000007972	yars2	92	62.640	Cyprinodon_variegatus
ENSMUSG00000022792	Yars2	100	57.203	ENSDARG00000077299	yars2	100	57.203	Danio_rerio
ENSMUSG00000022792	Yars2	100	86.229	ENSDNOG00000024479	YARS2	100	86.229	Dasypus_novemcinctus
ENSMUSG00000022792	Yars2	100	59.441	ENSDORG00000011489	Yars2	87	91.364	Dipodomys_ordii
ENSMUSG00000022792	Yars2	99	46.072	FBgn0035064	TyrRS-m	99	46.072	Drosophila_melanogaster
ENSMUSG00000022792	Yars2	92	55.505	ENSEBUG00000006652	yars2	91	55.505	Eptatretus_burgeri
ENSMUSG00000022792	Yars2	100	86.402	ENSEASG00005004548	YARS2	100	87.029	Equus_asinus_asinus
ENSMUSG00000022792	Yars2	100	86.192	ENSECAG00000011140	YARS2	100	86.820	Equus_caballus
ENSMUSG00000022792	Yars2	94	60.722	ENSELUG00000007909	yars2	86	60.722	Esox_lucius
ENSMUSG00000022792	Yars2	100	86.192	ENSFCAG00000005329	YARS2	100	86.192	Felis_catus
ENSMUSG00000022792	Yars2	99	52.113	ENSFALG00000001189	YARS2	97	76.042	Ficedula_albicollis
ENSMUSG00000022792	Yars2	100	86.287	ENSFDAG00000006499	YARS2	100	86.287	Fukomys_damarensis
ENSMUSG00000022792	Yars2	100	60.825	ENSFHEG00000002505	yars2	89	60.825	Fundulus_heteroclitus
ENSMUSG00000022792	Yars2	94	59.101	ENSGMOG00000001082	yars2	94	59.101	Gadus_morhua
ENSMUSG00000022792	Yars2	100	65.708	ENSGALG00000012919	YARS2	100	65.708	Gallus_gallus
ENSMUSG00000022792	Yars2	100	60.825	ENSGAFG00000003993	yars2	100	60.825	Gambusia_affinis
ENSMUSG00000022792	Yars2	100	59.414	ENSGACG00000003720	yars2	99	59.414	Gasterosteus_aculeatus
ENSMUSG00000022792	Yars2	100	68.116	ENSGAGG00000007739	YARS2	100	68.116	Gopherus_agassizii
ENSMUSG00000022792	Yars2	79	94.231	ENSGGOG00000026482	-	98	94.231	Gorilla_gorilla
ENSMUSG00000022792	Yars2	100	58.980	ENSHBUG00000014602	yars2	100	58.980	Haplochromis_burtoni
ENSMUSG00000022792	Yars2	100	86.667	ENSHGLG00000009938	YARS2	97	86.667	Heterocephalus_glaber_female
ENSMUSG00000022792	Yars2	100	87.924	ENSHGLG00100001061	YARS2	100	87.924	Heterocephalus_glaber_male
ENSMUSG00000022792	Yars2	89	54.313	ENSHCOG00000004523	yars2	84	56.423	Hippocampus_comes
ENSMUSG00000022792	Yars2	100	59.794	ENSIPUG00000011637	yars2	100	59.794	Ictalurus_punctatus
ENSMUSG00000022792	Yars2	100	87.500	ENSSTOG00000011917	YARS2	100	87.500	Ictidomys_tridecemlineatus
ENSMUSG00000022792	Yars2	96	88.352	ENSJJAG00000000641	Yars2	100	86.653	Jaculus_jaculus
ENSMUSG00000022792	Yars2	100	59.006	ENSKMAG00000016962	yars2	100	59.006	Kryptolebias_marmoratus
ENSMUSG00000022792	Yars2	99	60.426	ENSLBEG00000022576	yars2	96	60.426	Labrus_bergylta
ENSMUSG00000022792	Yars2	100	58.542	ENSLACG00000006720	YARS2	100	58.542	Latimeria_chalumnae
ENSMUSG00000022792	Yars2	100	62.683	ENSLOCG00000016695	yars2	99	62.683	Lepisosteus_oculatus
ENSMUSG00000022792	Yars2	100	83.891	ENSLAFG00000017360	YARS2	100	83.891	Loxodonta_africana
ENSMUSG00000022792	Yars2	100	84.728	ENSMFAG00000032763	YARS2	100	84.728	Macaca_fascicularis
ENSMUSG00000022792	Yars2	100	84.728	ENSMMUG00000013654	YARS2	100	84.728	Macaca_mulatta
ENSMUSG00000022792	Yars2	79	98.077	ENSMNEG00000033863	YARS2	98	98.077	Macaca_nemestrina
ENSMUSG00000022792	Yars2	100	84.519	ENSMLEG00000040261	YARS2	100	84.519	Mandrillus_leucophaeus
ENSMUSG00000022792	Yars2	100	57.143	ENSMAMG00000023144	yars2	100	57.143	Mastacembelus_armatus
ENSMUSG00000022792	Yars2	100	58.776	ENSMZEG00005010162	yars2	100	58.776	Maylandia_zebra
ENSMUSG00000022792	Yars2	99	52.113	ENSMGAG00000013318	YARS2	99	76.384	Meleagris_gallopavo
ENSMUSG00000022792	Yars2	100	95.339	ENSMAUG00000012334	Yars2	100	95.339	Mesocricetus_auratus
ENSMUSG00000022792	Yars2	100	85.356	ENSMICG00000033335	YARS2	100	85.356	Microcebus_murinus
ENSMUSG00000022792	Yars2	100	93.432	ENSMOCG00000011433	Yars2	100	93.432	Microtus_ochrogaster
ENSMUSG00000022792	Yars2	93	50.569	ENSMMOG00000001063	yars2	93	56.902	Mola_mola
ENSMUSG00000022792	Yars2	100	75.262	ENSMODG00000012921	-	100	75.262	Monodelphis_domestica
ENSMUSG00000022792	Yars2	93	57.205	ENSMALG00000013849	yars2	94	57.205	Monopterus_albus
ENSMUSG00000022792	Yars2	100	99.576	MGP_CAROLIEiJ_G0020491	Yars2	100	99.576	Mus_caroli
ENSMUSG00000022792	Yars2	100	98.400	MGP_PahariEiJ_G0016196	Yars2	100	98.400	Mus_pahari
ENSMUSG00000022792	Yars2	100	99.788	MGP_SPRETEiJ_G0021386	Yars2	100	99.788	Mus_spretus
ENSMUSG00000022792	Yars2	100	85.565	ENSMPUG00000000223	YARS2	100	85.565	Mustela_putorius_furo
ENSMUSG00000022792	Yars2	100	85.356	ENSMLUG00000001614	YARS2	100	85.356	Myotis_lucifugus
ENSMUSG00000022792	Yars2	100	89.218	ENSNGAG00000021477	Yars2	99	89.218	Nannospalax_galili
ENSMUSG00000022792	Yars2	100	59.588	ENSNBRG00000018713	yars2	100	59.588	Neolamprologus_brichardi
ENSMUSG00000022792	Yars2	100	83.682	ENSNLEG00000016641	YARS2	100	83.682	Nomascus_leucogenys
ENSMUSG00000022792	Yars2	65	92.308	ENSMEUG00000003618	-	65	92.308	Notamacropus_eugenii
ENSMUSG00000022792	Yars2	100	83.023	ENSOPRG00000007817	-	100	83.023	Ochotona_princeps
ENSMUSG00000022792	Yars2	100	76.059	ENSODEG00000006403	YARS2	100	76.059	Octodon_degus
ENSMUSG00000022792	Yars2	94	63.063	ENSONIG00000008830	yars2	91	63.063	Oreochromis_niloticus
ENSMUSG00000022792	Yars2	100	60.140	ENSOANG00000019795	-	73	82.949	Ornithorhynchus_anatinus
ENSMUSG00000022792	Yars2	100	84.937	ENSOCUG00000000022	YARS2	100	84.937	Oryctolagus_cuniculus
ENSMUSG00000022792	Yars2	94	60.948	ENSORLG00000002424	yars2	93	60.948	Oryzias_latipes
ENSMUSG00000022792	Yars2	94	61.625	ENSORLG00020019938	yars2	93	61.625	Oryzias_latipes_hni
ENSMUSG00000022792	Yars2	94	47.964	ENSORLG00015012856	yars2	91	47.964	Oryzias_latipes_hsok
ENSMUSG00000022792	Yars2	94	60.271	ENSOMEG00000007611	yars2	93	60.271	Oryzias_melastigma
ENSMUSG00000022792	Yars2	100	76.151	ENSOGAG00000011505	YARS2	100	76.151	Otolemur_garnettii
ENSMUSG00000022792	Yars2	100	83.678	ENSOARG00000019327	-	100	83.678	Ovis_aries
ENSMUSG00000022792	Yars2	81	56.555	ENSOARG00000008982	-	93	56.555	Ovis_aries
ENSMUSG00000022792	Yars2	100	84.310	ENSPPAG00000036590	YARS2	100	84.310	Pan_paniscus
ENSMUSG00000022792	Yars2	100	86.402	ENSPPRG00000011306	YARS2	100	86.402	Panthera_pardus
ENSMUSG00000022792	Yars2	100	86.402	ENSPTIG00000020214	YARS2	100	86.402	Panthera_tigris_altaica
ENSMUSG00000022792	Yars2	100	84.100	ENSPTRG00000004819	YARS2	100	84.100	Pan_troglodytes
ENSMUSG00000022792	Yars2	100	84.519	ENSPANG00000015833	YARS2	100	84.519	Papio_anubis
ENSMUSG00000022792	Yars2	94	62.077	ENSPKIG00000022142	YARS2	83	62.077	Paramormyrops_kingsleyae
ENSMUSG00000022792	Yars2	93	56.009	ENSPKIG00000021759	yars2	90	56.009	Paramormyrops_kingsleyae
ENSMUSG00000022792	Yars2	99	51.408	ENSPSIG00000007855	YARS2	100	76.136	Pelodiscus_sinensis
ENSMUSG00000022792	Yars2	94	60.181	ENSPMGG00000005934	yars2	91	60.181	Periophthalmus_magnuspinnatus
ENSMUSG00000022792	Yars2	93	96.136	ENSPEMG00000007655	Yars2	93	96.136	Peromyscus_maniculatus_bairdii
ENSMUSG00000022792	Yars2	92	60.811	ENSPMAG00000002536	yars2	91	60.811	Petromyzon_marinus
ENSMUSG00000022792	Yars2	94	63.229	ENSPFOG00000012264	yars2	92	63.229	Poecilia_formosa
ENSMUSG00000022792	Yars2	94	63.229	ENSPLAG00000003699	yars2	92	63.229	Poecilia_latipinna
ENSMUSG00000022792	Yars2	100	60.825	ENSPMEG00000024102	yars2	100	60.825	Poecilia_mexicana
ENSMUSG00000022792	Yars2	94	62.780	ENSPREG00000011521	yars2	92	62.780	Poecilia_reticulata
ENSMUSG00000022792	Yars2	100	84.100	ENSPPYG00000004406	YARS2	100	84.100	Pongo_abelii
ENSMUSG00000022792	Yars2	77	94.444	ENSPCAG00000006086	YARS2	77	94.444	Procavia_capensis
ENSMUSG00000022792	Yars2	100	84.760	ENSPCOG00000026397	YARS2	100	84.760	Propithecus_coquereli
ENSMUSG00000022792	Yars2	100	86.192	ENSPVAG00000000520	YARS2	100	86.192	Pteropus_vampyrus
ENSMUSG00000022792	Yars2	100	58.980	ENSPNYG00000007346	yars2	100	58.980	Pundamilia_nyererei
ENSMUSG00000022792	Yars2	100	57.873	ENSPNAG00000004766	yars2	100	57.873	Pygocentrus_nattereri
ENSMUSG00000022792	Yars2	100	96.822	ENSRNOG00000025252	Yars2	100	96.822	Rattus_norvegicus
ENSMUSG00000022792	Yars2	90	77.049	ENSRBIG00000037050	-	91	77.049	Rhinopithecus_bieti
ENSMUSG00000022792	Yars2	90	77.049	ENSRBIG00000038155	-	91	77.049	Rhinopithecus_bieti
ENSMUSG00000022792	Yars2	100	84.310	ENSRBIG00000041046	-	100	84.310	Rhinopithecus_bieti
ENSMUSG00000022792	Yars2	100	84.310	ENSRROG00000037913	-	100	84.310	Rhinopithecus_roxellana
ENSMUSG00000022792	Yars2	89	76.543	ENSRROG00000030036	-	85	82.097	Rhinopithecus_roxellana
ENSMUSG00000022792	Yars2	92	34.076	YPL097W	-	87	34.076	Saccharomyces_cerevisiae
ENSMUSG00000022792	Yars2	100	83.299	ENSSBOG00000023473	YARS2	100	83.299	Saimiri_boliviensis_boliviensis
ENSMUSG00000022792	Yars2	100	76.618	ENSSHAG00000004495	YARS2	100	76.618	Sarcophilus_harrisii
ENSMUSG00000022792	Yars2	92	62.069	ENSSFOG00015002490	yars2	89	62.069	Scleropages_formosus
ENSMUSG00000022792	Yars2	94	62.528	ENSSMAG00000006844	yars2	89	62.528	Scophthalmus_maximus
ENSMUSG00000022792	Yars2	100	58.776	ENSSDUG00000023361	yars2	100	58.776	Seriola_dumerili
ENSMUSG00000022792	Yars2	100	58.367	ENSSLDG00000023865	yars2	100	58.367	Seriola_lalandi_dorsalis
ENSMUSG00000022792	Yars2	100	63.074	ENSSPUG00000000061	YARS2	98	63.074	Sphenodon_punctatus
ENSMUSG00000022792	Yars2	100	59.588	ENSSPAG00000020638	yars2	100	59.588	Stegastes_partitus
ENSMUSG00000022792	Yars2	100	87.029	ENSSSCG00000027429	-	100	87.029	Sus_scrofa
ENSMUSG00000022792	Yars2	99	52.113	ENSTGUG00000011510	YARS2	96	73.077	Taeniopygia_guttata
ENSMUSG00000022792	Yars2	92	62.759	ENSTRUG00000016475	yars2	91	62.077	Takifugu_rubripes
ENSMUSG00000022792	Yars2	94	60.497	ENSTNIG00000006253	yars2	91	60.497	Tetraodon_nigroviridis
ENSMUSG00000022792	Yars2	78	94.966	ENSTBEG00000008274	YARS2	78	94.966	Tupaia_belangeri
ENSMUSG00000022792	Yars2	100	85.774	ENSTTRG00000013823	YARS2	100	85.774	Tursiops_truncatus
ENSMUSG00000022792	Yars2	100	84.100	ENSUAMG00000014358	YARS2	100	84.100	Ursus_americanus
ENSMUSG00000022792	Yars2	100	84.100	ENSUMAG00000003011	YARS2	100	84.100	Ursus_maritimus
ENSMUSG00000022792	Yars2	100	87.238	ENSVPAG00000004767	YARS2	100	87.238	Vicugna_pacos
ENSMUSG00000022792	Yars2	97	87.555	ENSVVUG00000012736	YARS2	100	85.774	Vulpes_vulpes
ENSMUSG00000022792	Yars2	76	60.465	ENSXETG00000012271	yars2	95	60.465	Xenopus_tropicalis
ENSMUSG00000022792	Yars2	100	59.175	ENSXCOG00000020889	yars2	100	59.175	Xiphophorus_couchianus
ENSMUSG00000022792	Yars2	100	59.794	ENSXMAG00000009650	yars2	100	59.794	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	ISO	Function
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004812	aminoacyl-tRNA ligase activity	-	IEA	Function
GO:0004831	tyrosine-tRNA ligase activity	21873635.	IBA	Function
GO:0004831	tyrosine-tRNA ligase activity	-	ISO	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006412	translation	-	IEA	Process
GO:0006418	tRNA aminoacylation for protein translation	-	IEA	Process
GO:0006437	tyrosyl-tRNA aminoacylation	-	IEA	Process
GO:0016604	nuclear body	-	ISO	Component
GO:0016874	ligase activity	-	IEA	Function
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0043039	tRNA aminoacylation	21873635.	IBA	Process
GO:0043039	tRNA aminoacylation	-	ISO	Process
GO:0070184	mitochondrial tyrosyl-tRNA aminoacylation	-	ISO	Process
GO:0072545	tyrosine binding	-	ISO	Function