EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000022800 (Gene tree)
Gene ID
69823
Gene Symbol
Fyttd1
Alias
2010005M05Rik|3830411L18Rik|3830421F13Rik|4933423A17Rik
Full Name
forty-two-three domain containing 1
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
31376 bases
Position
chr16:32877500-32908875
Accession
1917955
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000023489FYTTPF07078.115.8e-16711
ENSMUSP00000131446FYTTPF07078.112.7e-13212
ENSMUSP00000131446FYTTPF07078.112.7e-13222
ENSMUSP00000155929FYTTPF07078.117.2e-10911
ENSMUSP00000113541FYTTPF07078.111.9e-6811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000145146-620--- (aa)--
ENSMUST00000135854-563--- (aa)--
ENSMUST00000120345-648-ENSMUSP00000113541129 (aa)-D3Z591
ENSMUST00000125843-514--- (aa)--
ENSMUST00000232272-1852-ENSMUSP00000155929199 (aa)-UPI00000EA8C7
ENSMUST00000231751-1671--- (aa)--
ENSMUST00000171325-1792XM_006522521ENSMUSP00000131446283 (aa)XP_006522586Q91Z49
ENSMUST00000023489-4312XM_006522522ENSMUSP00000023489317 (aa)XP_006522585Q91Z49
ENSMUST00000137863-718--- (aa)--
ENSMUST00000149183-634--- (aa)--
ENSMUST00000127493-520--- (aa)--
ENSMUST00000141590-1015--- (aa)--
ENSMUST00000143151-445--- (aa)--
ENSMUST00000232300-2262--- (aa)--
Gene Model
Click here to download ENSMUSG00000022800's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022800's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000022800Fyttd110092.462ENSG00000122068FYTTD110092.453Homo_sapiens
ENSMUSG00000022800Fyttd110043.602ENSAPOG00000015571-9542.532Acanthochromis_polyacanthus
ENSMUSG00000022800Fyttd110095.980ENSAMEG00000004083FYTTD110094.671Ailuropoda_melanoleuca
ENSMUSG00000022800Fyttd110042.180ENSACIG00000001559-9440.952Amphilophus_citrinellus
ENSMUSG00000022800Fyttd110045.327ENSAOCG00000018069-9742.947Amphiprion_ocellaris
ENSMUSG00000022800Fyttd110045.327ENSAPEG00000003725-9742.947Amphiprion_percula
ENSMUSG00000022800Fyttd19948.241ENSATEG00000020932-9545.016Anabas_testudineus
ENSMUSG00000022800Fyttd110071.357ENSAPLG00000015624FYTTD19365.993Anas_platyrhynchos
ENSMUSG00000022800Fyttd110067.337ENSACAG00000002796FYTTD110063.407Anolis_carolinensis
ENSMUSG00000022800Fyttd110092.767ENSANAG00000024581FYTTD110092.767Aotus_nancymaae
ENSMUSG00000022800Fyttd110045.024ENSACLG00000011379-9542.357Astatotilapia_calliptera
ENSMUSG00000022800Fyttd18155.963ENSAMXG00000043436-9741.141Astyanax_mexicanus
ENSMUSG00000022800Fyttd110093.467ENSBTAG00000014874FYTTD110093.396Bos_taurus
ENSMUSG00000022800Fyttd110092.453ENSCJAG00000016488FYTTD18192.453Callithrix_jacchus
ENSMUSG00000022800Fyttd110095.980ENSCAFG00000016270FYTTD110095.597Canis_familiaris
ENSMUSG00000022800Fyttd110095.980ENSCAFG00000029695-10095.406Canis_familiaris
ENSMUSG00000022800Fyttd110095.980ENSCAFG00020003266FYTTD110095.597Canis_lupus_dingo
ENSMUSG00000022800Fyttd110094.025ENSCHIG00000021253-10093.711Capra_hircus
ENSMUSG00000022800Fyttd110091.457ENSCHIG00000015524-10090.536Capra_hircus
ENSMUSG00000022800Fyttd110093.970ENSTSYG00000013767FYTTD110093.375Carlito_syrichta
ENSMUSG00000022800Fyttd110076.678ENSCPOG00000011463FYTTD110083.843Cavia_porcellus
ENSMUSG00000022800Fyttd110092.965ENSCCAG00000029719FYTTD110092.767Cebus_capucinus
ENSMUSG00000022800Fyttd110092.453ENSCATG00000037016FYTTD110092.453Cercocebus_atys
ENSMUSG00000022800Fyttd110094.574ENSCLAG00000012210-10094.574Chinchilla_lanigera
ENSMUSG00000022800Fyttd110072.864ENSCLAG00000001980-10074.277Chinchilla_lanigera
ENSMUSG00000022800Fyttd110091.960ENSCSAG00000008466FYTTD110091.824Chlorocebus_sabaeus
ENSMUSG00000022800Fyttd110075.394ENSCHOG00000002881FYTTD110075.394Choloepus_hoffmanni
ENSMUSG00000022800Fyttd110069.500ENSCPBG00000017348FYTTD19370.707Chrysemys_picta_bellii
ENSMUSG00000022800Fyttd19130.195ENSCPBG00000016753-8930.479Chrysemys_picta_bellii
ENSMUSG00000022800Fyttd110087.107ENSCANG00000034075-10090.164Colobus_angolensis_palliatus
ENSMUSG00000022800Fyttd110091.457ENSCANG00000021075-9990.845Colobus_angolensis_palliatus
ENSMUSG00000022800Fyttd19475.207ENSCGRG00001017304-9775.410Cricetulus_griseus_chok1gshd
ENSMUSG00000022800Fyttd110097.161ENSCGRG00001023957-10097.161Cricetulus_griseus_chok1gshd
ENSMUSG00000022800Fyttd19475.207ENSCGRG00000010945-9775.410Cricetulus_griseus_crigri
ENSMUSG00000022800Fyttd110095.980ENSCGRG00000014096-9496.820Cricetulus_griseus_crigri
ENSMUSG00000022800Fyttd19457.600ENSCSEG00000011478-9544.860Cynoglossus_semilaevis
ENSMUSG00000022800Fyttd17854.808ENSCVAG00000008388-9239.286Cyprinodon_variegatus
ENSMUSG00000022800Fyttd110093.467ENSDNOG00000040247FYTTD110092.429Dasypus_novemcinctus
ENSMUSG00000022800Fyttd110091.473ENSDORG00000011686Fyttd110091.473Dipodomys_ordii
ENSMUSG00000022800Fyttd110092.462ENSETEG00000000700FYTTD110091.483Echinops_telfairi
ENSMUSG00000022800Fyttd110095.477ENSEASG00005006793FYTTD110094.953Equus_asinus_asinus
ENSMUSG00000022800Fyttd110095.980ENSECAG00000019051FYTTD110095.268Equus_caballus
ENSMUSG00000022800Fyttd110091.457ENSEEUG00000001433-10090.795Erinaceus_europaeus
ENSMUSG00000022800Fyttd110089.447ENSEEUG00000002650-10089.121Erinaceus_europaeus
ENSMUSG00000022800Fyttd18846.448ENSELUG00000024402-9741.420Esox_lucius
ENSMUSG00000022800Fyttd110094.472ENSFCAG00000009992FYTTD110094.025Felis_catus
ENSMUSG00000022800Fyttd110070.352ENSFALG00000007503FYTTD19066.202Ficedula_albicollis
ENSMUSG00000022800Fyttd110088.945ENSFDAG00000005650-9785.174Fukomys_damarensis
ENSMUSG00000022800Fyttd110095.349ENSFDAG00000010594-10095.349Fukomys_damarensis
ENSMUSG00000022800Fyttd19744.231ENSFHEG00000016387-9542.718Fundulus_heteroclitus
ENSMUSG00000022800Fyttd19351.240ENSGMOG00000002130-9540.575Gadus_morhua
ENSMUSG00000022800Fyttd110066.834ENSGALG00000007581FYTTD110061.321Gallus_gallus
ENSMUSG00000022800Fyttd19130.599ENSGALG00000030064-9330.189Gallus_gallus
ENSMUSG00000022800Fyttd18844.022ENSGAFG00000008375-9539.077Gambusia_affinis
ENSMUSG00000022800Fyttd19453.226ENSGACG00000016088-9241.613Gasterosteus_aculeatus
ENSMUSG00000022800Fyttd110069.000ENSGAGG00000011127FYTTD18569.697Gopherus_agassizii
ENSMUSG00000022800Fyttd19631.269ENSGAGG00000022107-9431.494Gopherus_agassizii
ENSMUSG00000022800Fyttd110092.462ENSGGOG00000011665FYTTD110091.824Gorilla_gorilla
ENSMUSG00000022800Fyttd110045.024ENSHBUG00000017614-9542.357Haplochromis_burtoni
ENSMUSG00000022800Fyttd110082.412ENSHGLG00000017583-10084.459Heterocephalus_glaber_female
ENSMUSG00000022800Fyttd19674.869ENSHGLG00000015565-10070.805Heterocephalus_glaber_female
ENSMUSG00000022800Fyttd19188.889ENSHGLG00000006924-9476.429Heterocephalus_glaber_female
ENSMUSG00000022800Fyttd110093.798ENSHGLG00000019355-10093.798Heterocephalus_glaber_female
ENSMUSG00000022800Fyttd19188.889ENSHGLG00100004604-9466.429Heterocephalus_glaber_male
ENSMUSG00000022800Fyttd110071.141ENSHGLG00100004761-10071.141Heterocephalus_glaber_male
ENSMUSG00000022800Fyttd110093.798ENSHGLG00100017162-10093.798Heterocephalus_glaber_male
ENSMUSG00000022800Fyttd110081.407ENSHGLG00100014883-10078.233Heterocephalus_glaber_male
ENSMUSG00000022800Fyttd17955.340ENSHCOG00000021011-9641.967Hippocampus_comes
ENSMUSG00000022800Fyttd18154.545ENSIPUG00000012096-9640.625Ictalurus_punctatus
ENSMUSG00000022800Fyttd110096.124ENSSTOG00000028291FYTTD110096.124Ictidomys_tridecemlineatus
ENSMUSG00000022800Fyttd110093.798ENSJJAG00000016455Fyttd110093.798Jaculus_jaculus
ENSMUSG00000022800Fyttd19452.800ENSKMAG00000004518-9541.667Kryptolebias_marmoratus
ENSMUSG00000022800Fyttd110045.972ENSLBEG00000009232-9543.175Labrus_bergylta
ENSMUSG00000022800Fyttd110059.903ENSLACG00000006864FYTTD110053.982Latimeria_chalumnae
ENSMUSG00000022800Fyttd19739.200ENSLACG00000005906-9435.082Latimeria_chalumnae
ENSMUSG00000022800Fyttd19455.372ENSLOCG00000008490FYTTD19645.808Lepisosteus_oculatus
ENSMUSG00000022800Fyttd110092.965ENSLAFG00000017209FYTTD110092.744Loxodonta_africana
ENSMUSG00000022800Fyttd110092.138ENSMFAG00000033352FYTTD19889.796Macaca_fascicularis
ENSMUSG00000022800Fyttd110091.960ENSMMUG00000048439FYTTD19791.901Macaca_mulatta
ENSMUSG00000022800Fyttd110092.138ENSMNEG00000038497FYTTD110092.138Macaca_nemestrina
ENSMUSG00000022800Fyttd110091.960ENSMLEG00000033370FYTTD19991.901Mandrillus_leucophaeus
ENSMUSG00000022800Fyttd18060.550ENSMAMG00000002358-9541.667Mastacembelus_armatus
ENSMUSG00000022800Fyttd110045.024ENSMZEG00005007182-9641.368Maylandia_zebra
ENSMUSG00000022800Fyttd110069.347ENSMGAG00000007933FYTTD110066.316Meleagris_gallopavo
ENSMUSG00000022800Fyttd110095.070ENSMAUG00000010679Fyttd110095.070Mesocricetus_auratus
ENSMUSG00000022800Fyttd110096.215ENSMICG00000049152FYTTD110096.215Microcebus_murinus
ENSMUSG00000022800Fyttd110096.124ENSMOCG00000015509Fyttd110096.124Microtus_ochrogaster
ENSMUSG00000022800Fyttd19743.062ENSMMOG00000018430-9540.491Mola_mola
ENSMUSG00000022800Fyttd19475.207ENSMODG00000018393FYTTD18368.196Monodelphis_domestica
ENSMUSG00000022800Fyttd19456.000ENSMALG00000005624-9742.638Monopterus_albus
ENSMUSG00000022800Fyttd110099.497MGP_CAROLIEiJ_G0020682Fyttd110099.225Mus_caroli
ENSMUSG00000022800Fyttd110099.225MGP_PahariEiJ_G0016385Fyttd110099.225Mus_pahari
ENSMUSG00000022800Fyttd1100100.000MGP_SPRETEiJ_G0021578Fyttd1100100.000Mus_spretus
ENSMUSG00000022800Fyttd110095.980ENSMPUG00000004085FYTTD110094.969Mustela_putorius_furo
ENSMUSG00000022800Fyttd110094.975ENSMLUG00000005630FYTTD110094.025Myotis_lucifugus
ENSMUSG00000022800Fyttd110096.899ENSNGAG00000020280Fyttd110096.899Nannospalax_galili
ENSMUSG00000022800Fyttd110045.498ENSNBRG00000005032-9542.540Neolamprologus_brichardi
ENSMUSG00000022800Fyttd110092.462ENSNLEG00000015547FYTTD110092.226Nomascus_leucogenys
ENSMUSG00000022800Fyttd17881.250ENSMEUG00000001523-7281.250Notamacropus_eugenii
ENSMUSG00000022800Fyttd110092.462ENSOPRG00000008211FYTTD110092.199Ochotona_princeps
ENSMUSG00000022800Fyttd110093.798ENSODEG00000012844-10093.798Octodon_degus
ENSMUSG00000022800Fyttd19480.749ENSODEG00000013104-9281.250Octodon_degus
ENSMUSG00000022800Fyttd110045.498ENSONIG00000010717-10043.137Oreochromis_niloticus
ENSMUSG00000022800Fyttd19478.512ENSOANG00000014284FYTTD110065.141Ornithorhynchus_anatinus
ENSMUSG00000022800Fyttd110093.970ENSOCUG00000012770FYTTD110092.744Oryctolagus_cuniculus
ENSMUSG00000022800Fyttd19454.918ENSORLG00000009073-9543.038Oryzias_latipes
ENSMUSG00000022800Fyttd19455.738ENSORLG00020012343-9143.450Oryzias_latipes_hni
ENSMUSG00000022800Fyttd19455.738ENSORLG00015008022-9143.770Oryzias_latipes_hsok
ENSMUSG00000022800Fyttd19454.918ENSOMEG00000006553-9543.849Oryzias_melastigma
ENSMUSG00000022800Fyttd19495.041ENSOGAG00000011888FYTTD110084.211Otolemur_garnettii
ENSMUSG00000022800Fyttd17380.000ENSOARG00000002583-9778.222Ovis_aries
ENSMUSG00000022800Fyttd110093.970ENSOARG00000020275-9394.966Ovis_aries
ENSMUSG00000022800Fyttd110092.462ENSPPAG00000027558FYTTD110092.453Pan_paniscus
ENSMUSG00000022800Fyttd110094.472ENSPPRG00000009562FYTTD110094.755Panthera_pardus
ENSMUSG00000022800Fyttd110094.472ENSPTIG00000006326FYTTD110094.025Panthera_tigris_altaica
ENSMUSG00000022800Fyttd110092.462ENSPTRG00000015796FYTTD110092.453Pan_troglodytes
ENSMUSG00000022800Fyttd19092.657ENSPANG00000030359FYTTD110092.657Papio_anubis
ENSMUSG00000022800Fyttd110047.847ENSPKIG00000022465-8348.718Paramormyrops_kingsleyae
ENSMUSG00000022800Fyttd110067.000ENSPSIG00000002293FYTTD110066.316Pelodiscus_sinensis
ENSMUSG00000022800Fyttd17759.048ENSPMGG00000009334-8659.048Periophthalmus_magnuspinnatus
ENSMUSG00000022800Fyttd110096.899ENSPEMG00000011670Fyttd110096.899Peromyscus_maniculatus_bairdii
ENSMUSG00000022800Fyttd110074.874ENSPCIG00000018720FYTTD110074.528Phascolarctos_cinereus
ENSMUSG00000022800Fyttd19455.200ENSPFOG00000022975-8951.087Poecilia_formosa
ENSMUSG00000022800Fyttd19453.906ENSPLAG00000009293-9545.283Poecilia_latipinna
ENSMUSG00000022800Fyttd19455.200ENSPMEG00000015488-9544.937Poecilia_mexicana
ENSMUSG00000022800Fyttd19454.400ENSPREG00000006038-9544.762Poecilia_reticulata
ENSMUSG00000022800Fyttd110092.965ENSPPYG00000014456FYTTD110092.453Pongo_abelii
ENSMUSG00000022800Fyttd110094.322ENSPCAG00000003873FYTTD110094.322Procavia_capensis
ENSMUSG00000022800Fyttd110096.215ENSPCOG00000024162FYTTD110096.215Propithecus_coquereli
ENSMUSG00000022800Fyttd110091.798ENSPVAG00000016445FYTTD110091.798Pteropus_vampyrus
ENSMUSG00000022800Fyttd110045.024ENSPNYG00000002296-9542.357Pundamilia_nyererei
ENSMUSG00000022800Fyttd19444.828ENSPNAG00000016146-9642.025Pygocentrus_nattereri
ENSMUSG00000022800Fyttd110097.487ENSRNOG00000034233Fyttd110095.423Rattus_norvegicus
ENSMUSG00000022800Fyttd18386.747ENSRBIG00000038260-10088.571Rhinopithecus_bieti
ENSMUSG00000022800Fyttd110091.960ENSRBIG00000018859-10092.254Rhinopithecus_bieti
ENSMUSG00000022800Fyttd110092.453ENSRROG00000014194FYTTD110092.453Rhinopithecus_roxellana
ENSMUSG00000022800Fyttd110092.965ENSSBOG00000035412FYTTD19991.608Saimiri_boliviensis_boliviensis
ENSMUSG00000022800Fyttd110075.377ENSSHAG00000005704FYTTD110075.175Sarcophilus_harrisii
ENSMUSG00000022800Fyttd19452.756ENSSFOG00015014729-9344.720Scleropages_formosus
ENSMUSG00000022800Fyttd19456.000ENSSMAG00000008798-9740.373Scophthalmus_maximus
ENSMUSG00000022800Fyttd110048.936ENSSDUG00000009615-9544.409Seriola_dumerili
ENSMUSG00000022800Fyttd19455.200ENSSLDG00000021326-9543.730Seriola_lalandi_dorsalis
ENSMUSG00000022800Fyttd110090.955ENSSARG00000009996FYTTD110075.157Sorex_araneus
ENSMUSG00000022800Fyttd110068.844ENSSPUG00000012549FYTTD110066.352Sphenodon_punctatus
ENSMUSG00000022800Fyttd19742.233ENSSPAG00000002856-9041.914Stegastes_partitus
ENSMUSG00000022800Fyttd110095.980ENSSSCG00000027139FYTTD110095.899Sus_scrofa
ENSMUSG00000022800Fyttd110069.347ENSTGUG00000009645FYTTD110065.986Taeniopygia_guttata
ENSMUSG00000022800Fyttd19454.331ENSTRUG00000008895-8641.279Takifugu_rubripes
ENSMUSG00000022800Fyttd19455.738ENSTNIG00000007811-9445.338Tetraodon_nigroviridis
ENSMUSG00000022800Fyttd19494.215ENSTBEG00000005595FYTTD110078.864Tupaia_belangeri
ENSMUSG00000022800Fyttd110094.975ENSTTRG00000016288FYTTD19994.631Tursiops_truncatus
ENSMUSG00000022800Fyttd19094.828ENSUAMG00000021767-9994.828Ursus_americanus
ENSMUSG00000022800Fyttd110095.980ENSUMAG00000003373FYTTD110094.969Ursus_maritimus
ENSMUSG00000022800Fyttd19494.652ENSVPAG00000003854FYTTD18394.652Vicugna_pacos
ENSMUSG00000022800Fyttd110094.975ENSVVUG00000008003FYTTD19894.700Vulpes_vulpes
ENSMUSG00000022800Fyttd19461.157ENSXETG00000024516fyttd19751.361Xenopus_tropicalis
ENSMUSG00000022800Fyttd19455.200ENSXCOG00000007479-9544.089Xiphophorus_couchianus
ENSMUSG00000022800Fyttd19455.200ENSXMAG00000004764-9544.409Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding-IEAFunction
GO:0003729mRNA binding21873635.IBAFunction
GO:0003729mRNA binding-ISOFunction
GO:0005634nucleus-IEAComponent
GO:0005654nucleoplasm-ISOComponent
GO:0006406mRNA export from nucleus21873635.IBAProcess
GO:0006406mRNA export from nucleus-ISOProcess
GO:0016607nuclear speck21873635.IBAComponent
GO:0016607nuclear speck-ISOComponent
GO:0051028mRNA transport-IEAProcess

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