EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000022814 (Gene tree)
Gene ID: 22247
Gene Symbol: Umps
Alias: 1700095D23Rik
Full Name: uridine monophosphate synthetase
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 12257
Position: chr16: 33954782-33967038
Accession: 1298388
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000023510	-	3484	XM_006522008	ENSMUSP00000023510	481 (aa)	XP_006522071	P13439
ENSMUST00000131990	-	3283	-	ENSMUSP00000119423	57 (aa)	-	D6RJ62

Gene Model

Click here to download ENSMUSG00000022814's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00240	Pyrimidine metabolism	KEGG
mmu00983	Drug metabolism - other enzymes	KEGG
mmu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022814's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022814	Umps	99	45.492	FBgn0003257	r-l	99	45.492	Drosophila_melanogaster

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003824	catalytic activity	-	IEA	Function
GO:0004588	orotate phosphoribosyltransferase activity	-	ISO	Function
GO:0004590	orotidine-5'-phosphate decarboxylase activity	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	-	IEA	Process
GO:0006221	pyrimidine nucleotide biosynthetic process	-	IEA	Process
GO:0006222	UMP biosynthetic process	-	ISO	Process
GO:0008152	metabolic process	-	IEA	Process
GO:0009116	nucleoside metabolic process	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0016757	transferase activity, transferring glycosyl groups	-	IEA	Function
GO:0016829	lyase activity	-	IEA	Function
GO:0016831	carboxy-lyase activity	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0044205	'de novo' UMP biosynthetic process	-	IEA	Process