EuRBPDB

Description

Ensembl ID: ENSMUSG00000022945 (Gene tree)
Gene ID: 110749
Gene Symbol: Chaf1b
Alias: 2600017H24Rik|CAF-1 subunit B|CAF-I 60 kDa subunit|CAF-IP60|CAF1|CAF1A|CAF1P60|MPHOSPH7
Full Name: chromatin assembly factor 1%2C subunit B (p60)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 22215 bases
Position: chr16:93883901-93906115
Accession: 1314881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000023666	eIF2A	PF08662.11	1.4e-05	1	1
ENSMUSP00000113684	eIF2A	PF08662.11	1.4e-05	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000124313	-	2828	-	-	- (aa)	-	-
ENSMUST00000128316	-	611	-	-	- (aa)	-	-
ENSMUST00000023666	-	1922	XM_006522847	ENSMUSP00000023666	572 (aa)	XP_006522910	Q9D0N7
ENSMUST00000142316	-	719	-	ENSMUSP00000121034	79 (aa)	-	D3YTP6
ENSMUST00000143006	-	428	-	ENSMUSP00000155864	34 (aa)	-	UPI000DE7D05F
ENSMUST00000120586	-	484	-	ENSMUSP00000113420	96 (aa)	-	D3Z616
ENSMUST00000117099	-	1894	-	ENSMUSP00000113684	572 (aa)	-	Q9D0N7

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000022945	Chaf1b	97	68.384	ENSACAG00000012679	CHAF1B	93	70.664	Anolis_carolinensis
ENSMUSG00000022945	Chaf1b	99	95.096	MGP_PahariEiJ_G0016689	Chaf1b	100	94.930	Mus_pahari
ENSMUSG00000022945	Chaf1b	100	98.951	MGP_SPRETEiJ_G0021890	Chaf1b	100	98.951	Mus_spretus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000790	nuclear chromatin	-	ISO	Component
GO:0005515	protein binding	17452450.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0006260	DNA replication	-	IEA	Process
GO:0006281	DNA repair	-	IEA	Process
GO:0006334	nucleosome assembly	21873635.	IBA	Process
GO:0006335	DNA replication-dependent nucleosome assembly	-	ISO	Process
GO:0006974	cellular response to DNA damage stimulus	-	IEA	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0031497	chromatin assembly	-	ISO	Process
GO:0032991	protein-containing complex	-	ISO	Component
GO:0033186	CAF-1 complex	21873635.	IBA	Component
GO:0033186	CAF-1 complex	-	ISO	Component
GO:0042393	histone binding	21873635.	IBA	Function