EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000022973 (Gene tree)
Gene ID
104015
Gene Symbol
Synj1
Alias
A930006D20Rik
Full Name
synaptojanin 1
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Minus strand
Length
75217 bases
Position
chr16:90936092-91011308
Accession
1354961
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000128997Exo_endo_phosPF03372.231.3e-1411
ENSMUSP00000113518Exo_endo_phosPF03372.231.4e-1411
ENSMUSP00000113308Exo_endo_phosPF03372.231.9e-1411
ENSMUSP00000119712Exo_endo_phosPF03372.233.3e-0711
ENSMUSP00000128997DUF1866PF08952.112.2e-5711
ENSMUSP00000113518DUF1866PF08952.112.2e-5711
ENSMUSP00000113308DUF1866PF08952.112.6e-5711
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000170853-7012-ENSMUSP000001289971309 (aa)-E9Q7S0
ENSMUST00000129743-547-ENSMUSP00000123231103 (aa)-F6XIX0
ENSMUST00000231524-727-ENSMUSP00000155939242 (aa)-UPI000DE7DF58
ENSMUST00000129041-772--- (aa)--
ENSMUST00000154276-3501-ENSMUSP00000122675189 (aa)-F7CD11
ENSMUST00000118390-6910XM_011246085ENSMUSP000001135181324 (aa)XP_011244387F7BQW7
ENSMUST00000125032-600-ENSMUSP00000120399200 (aa)-F6VSS8
ENSMUST00000130813-2224-ENSMUSP00000119712693 (aa)-D3Z1M7
ENSMUST00000121759-7090XM_006522837ENSMUSP000001133081607 (aa)XP_006522900D3Z656
ENSMUST00000156140-947--- (aa)--
ENSMUST00000231472-739-ENSMUSP0000015614888 (aa)-UPI000DE7CA35
ENSMUST00000118246-2743--- (aa)--
Gene Model
Click here to download ENSMUSG00000022973's gene model file
Pathways
Pathway IDPathway NameSource
mmu00562Inositol phosphate metabolismKEGG
mmu01100Metabolic pathwaysKEGG
mmu04070Phosphatidylinositol signaling systemKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000022973's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000022973Synj110059.770ENSMUSG00000023805Synj29959.581
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000022973Synj110097.691ENSG00000159082SYNJ110097.191Homo_sapiens
ENSMUSG00000022973Synj110083.453ENSAPOG00000002809synj19769.776Acanthochromis_polyacanthus
ENSMUSG00000022973Synj110096.006ENSAMEG00000015028SYNJ110088.181Ailuropoda_melanoleuca
ENSMUSG00000022973Synj110079.568ENSACIG00000008857synj19566.491Amphilophus_citrinellus
ENSMUSG00000022973Synj110082.878ENSAOCG00000009835synj19568.807Amphiprion_ocellaris
ENSMUSG00000022973Synj110082.878ENSAPEG00000021010synj19061.125Amphiprion_percula
ENSMUSG00000022973Synj110082.302ENSATEG00000002306synj18764.387Anabas_testudineus
ENSMUSG00000022973Synj110091.335ENSAPLG00000011832SYNJ110077.729Anas_platyrhynchos
ENSMUSG00000022973Synj110090.728ENSACAG00000003006-10083.612Anolis_carolinensis
ENSMUSG00000022973Synj110097.403ENSANAG00000027325SYNJ110092.841Aotus_nancymaae
ENSMUSG00000022973Synj110082.590ENSACLG00000002255synj19867.630Astatotilapia_calliptera
ENSMUSG00000022973Synj110083.046ENSAMXG00000008208synj19560.608Astyanax_mexicanus
ENSMUSG00000022973Synj110097.258ENSBTAG00000003063SYNJ110091.894Bos_taurus
ENSMUSG00000022973Synj110097.980ENSCJAG00000009187SYNJ110092.841Callithrix_jacchus
ENSMUSG00000022973Synj110097.258ENSCAFG00000009041SYNJ110087.825Canis_familiaris
ENSMUSG00000022973Synj110097.691ENSCAFG00020025776SYNJ19887.605Canis_lupus_dingo
ENSMUSG00000022973Synj110097.403ENSCHIG00000005095SYNJ110084.468Capra_hircus
ENSMUSG00000022973Synj110097.114ENSTSYG00000014541SYNJ110091.616Carlito_syrichta
ENSMUSG00000022973Synj18987.879ENSCAPG00000014483SYNJ19977.085Cavia_aperea
ENSMUSG00000022973Synj110097.835ENSCPOG00000012182SYNJ110093.216Cavia_porcellus
ENSMUSG00000022973Synj110097.403ENSCCAG00000020825SYNJ110092.460Cebus_capucinus
ENSMUSG00000022973Synj110097.835ENSCATG00000033891SYNJ110092.835Cercocebus_atys
ENSMUSG00000022973Synj110097.835ENSCLAG00000009796SYNJ110097.835Chinchilla_lanigera
ENSMUSG00000022973Synj110096.148ENSCSAG00000009654SYNJ110093.902Chlorocebus_sabaeus
ENSMUSG00000022973Synj183100.000ENSCHOG00000012390SYNJ18790.228Choloepus_hoffmanni
ENSMUSG00000022973Synj110093.506ENSCPBG00000006402SYNJ19787.540Chrysemys_picta_bellii
ENSMUSG00000022973Synj110097.835ENSCANG00000031359SYNJ110092.835Colobus_angolensis_palliatus
ENSMUSG00000022973Synj110098.124ENSCGRG00001010861Synj110096.104Cricetulus_griseus_chok1gshd
ENSMUSG00000022973Synj110098.124ENSCGRG00000015749Synj110098.124Cricetulus_griseus_crigri
ENSMUSG00000022973Synj110081.366ENSCSEG00000019614synj19969.167Cynoglossus_semilaevis
ENSMUSG00000022973Synj110077.503ENSCVAG00000019250synj19567.412Cyprinodon_variegatus
ENSMUSG00000022973Synj110081.935ENSDARG00000025011synj19670.430Danio_rerio
ENSMUSG00000022973Synj110089.377ENSDNOG00000010732SYNJ19983.638Dasypus_novemcinctus
ENSMUSG00000022973Synj110098.124ENSDORG00000014735-10098.124Dipodomys_ordii
ENSMUSG00000022973Synj18695.726ENSETEG00000018674SYNJ17895.726Echinops_telfairi
ENSMUSG00000022973Synj110097.691ENSEASG00005006287SYNJ19893.139Equus_asinus_asinus
ENSMUSG00000022973Synj110097.547ENSECAG00000004829SYNJ110088.289Equus_caballus
ENSMUSG00000022973Synj183100.000ENSEEUG00000005150SYNJ19587.805Erinaceus_europaeus
ENSMUSG00000022973Synj110081.583ENSELUG00000009731synj19566.015Esox_lucius
ENSMUSG00000022973Synj110097.547ENSFCAG00000012498SYNJ110090.944Felis_catus
ENSMUSG00000022973Synj17477.528ENSFALG00000004680SYNJ110069.569Ficedula_albicollis
ENSMUSG00000022973Synj110098.268ENSFDAG00000016818SYNJ110098.268Fukomys_damarensis
ENSMUSG00000022973Synj110081.081ENSFHEG00000017689synj19760.429Fundulus_heteroclitus
ENSMUSG00000022973Synj19379.268ENSGMOG00000014852synj17772.816Gadus_morhua
ENSMUSG00000022973Synj110092.641ENSGALG00000034317SYNJ110073.997Gallus_gallus
ENSMUSG00000022973Synj110082.302ENSGAFG00000019466synj18961.442Gambusia_affinis
ENSMUSG00000022973Synj19876.301ENSGACG00000020575synj19464.514Gasterosteus_aculeatus
ENSMUSG00000022973Synj110093.651ENSGAGG00000022523SYNJ110085.124Gopherus_agassizii
ENSMUSG00000022973Synj110097.691ENSGGOG00000015945SYNJ110092.683Gorilla_gorilla
ENSMUSG00000022973Synj110081.223ENSHBUG00000007774synj19669.954Haplochromis_burtoni
ENSMUSG00000022973Synj110097.980ENSHGLG00000006420SYNJ110097.980Heterocephalus_glaber_female
ENSMUSG00000022973Synj110097.980ENSHGLG00100012591SYNJ110097.980Heterocephalus_glaber_male
ENSMUSG00000022973Synj110077.122ENSHCOG00000012774synj18672.087Hippocampus_comes
ENSMUSG00000022973Synj110083.022ENSIPUG00000010691SYNJ19561.524Ictalurus_punctatus
ENSMUSG00000022973Synj110097.980ENSSTOG00000015806SYNJ110095.351Ictidomys_tridecemlineatus
ENSMUSG00000022973Synj19988.855ENSJJAG00000020168Synj110085.262Jaculus_jaculus
ENSMUSG00000022973Synj110082.302ENSKMAG00000004221synj19472.818Kryptolebias_marmoratus
ENSMUSG00000022973Synj110081.674ENSLBEG00000015081synj19766.244Labrus_bergylta
ENSMUSG00000022973Synj110086.686ENSLACG00000005928SYNJ19869.883Latimeria_chalumnae
ENSMUSG00000022973Synj110084.495ENSLOCG00000009230synj110070.402Lepisosteus_oculatus
ENSMUSG00000022973Synj110095.578ENSLAFG00000011806SYNJ19986.545Loxodonta_africana
ENSMUSG00000022973Synj19497.397ENSMFAG00000018883SYNJ19993.553Macaca_fascicularis
ENSMUSG00000022973Synj110096.576ENSMMUG00000004624SYNJ110093.612Macaca_mulatta
ENSMUSG00000022973Synj110097.835ENSMNEG00000040077SYNJ19593.845Macaca_nemestrina
ENSMUSG00000022973Synj110097.835ENSMLEG00000037029SYNJ110092.835Mandrillus_leucophaeus
ENSMUSG00000022973Synj110083.022ENSMAMG00000013404synj18863.130Mastacembelus_armatus
ENSMUSG00000022973Synj110082.590ENSMZEG00005024358synj19668.223Maylandia_zebra
ENSMUSG00000022973Synj110089.250ENSMGAG00000014522SYNJ110077.039Meleagris_gallopavo
ENSMUSG00000022973Synj110098.124ENSMAUG00000009743Synj110098.124Mesocricetus_auratus
ENSMUSG00000022973Synj110097.547ENSMICG00000034953SYNJ110092.530Microcebus_murinus
ENSMUSG00000022973Synj110081.277ENSMMOG00000010203synj19768.000Mola_mola
ENSMUSG00000022973Synj110086.020ENSMODG00000021073SYNJ110078.804Monodelphis_domestica
ENSMUSG00000022973Synj110082.734ENSMALG00000014015synj19660.917Monopterus_albus
ENSMUSG00000022973Synj110099.567MGP_CAROLIEiJ_G0020951Synj110099.567Mus_caroli
ENSMUSG00000022973Synj110099.711MGP_PahariEiJ_G0016656Synj110099.711Mus_pahari
ENSMUSG00000022973Synj110099.711MGP_SPRETEiJ_G0021857Synj110099.711Mus_spretus
ENSMUSG00000022973Synj110096.170ENSMPUG00000001153SYNJ110087.689Mustela_putorius_furo
ENSMUSG00000022973Synj19494.793ENSMLUG00000026584-10094.667Myotis_lucifugus
ENSMUSG00000022973Synj16282.864ENSMLUG00000005764-10073.777Myotis_lucifugus
ENSMUSG00000022973Synj110098.268ENSNGAG00000000453Synj110098.268Nannospalax_galili
ENSMUSG00000022973Synj110082.734ENSNBRG00000011936synj19764.753Neolamprologus_brichardi
ENSMUSG00000022973Synj18889.599ENSNLEG00000003734SYNJ110088.263Nomascus_leucogenys
ENSMUSG00000022973Synj18979.399ENSMEUG00000004158-7377.264Notamacropus_eugenii
ENSMUSG00000022973Synj110090.585ENSOPRG00000013602SYNJ19393.171Ochotona_princeps
ENSMUSG00000022973Synj110097.258ENSODEG00000002409-10097.258Octodon_degus
ENSMUSG00000022973Synj110081.650ENSONIG00000004667synj110068.153Oreochromis_niloticus
ENSMUSG00000022973Synj19491.815ENSOANG00000006929SYNJ19776.761Ornithorhynchus_anatinus
ENSMUSG00000022973Synj110095.863ENSOCUG00000001420SYNJ110085.063Oryctolagus_cuniculus
ENSMUSG00000022973Synj110081.295ENSORLG00000004320synj19867.014Oryzias_latipes
ENSMUSG00000022973Synj110077.809ENSORLG00020011994synj19466.233Oryzias_latipes_hni
ENSMUSG00000022973Synj110081.439ENSORLG00015018077synj19558.697Oryzias_latipes_hsok
ENSMUSG00000022973Synj110082.014ENSOMEG00000014322synj19766.345Oryzias_melastigma
ENSMUSG00000022973Synj110089.007ENSOGAG00000006010SYNJ110085.178Otolemur_garnettii
ENSMUSG00000022973Synj110095.745ENSOARG00000013414SYNJ19885.535Ovis_aries
ENSMUSG00000022973Synj110097.691ENSPPAG00000026784SYNJ110092.835Pan_paniscus
ENSMUSG00000022973Synj110097.691ENSPPRG00000023469SYNJ110091.020Panthera_pardus
ENSMUSG00000022973Synj110097.547ENSPTIG00000007930SYNJ110090.944Panthera_tigris_altaica
ENSMUSG00000022973Synj110097.691ENSPTRG00000023787SYNJ110092.835Pan_troglodytes
ENSMUSG00000022973Synj110097.691ENSPTRG00000048135-10088.973Pan_troglodytes
ENSMUSG00000022973Synj110097.835ENSPANG00000022531SYNJ110093.902Papio_anubis
ENSMUSG00000022973Synj110084.029ENSPKIG00000022603synj19576.667Paramormyrops_kingsleyae
ENSMUSG00000022973Synj110082.590ENSPMGG00000016831synj19167.445Periophthalmus_magnuspinnatus
ENSMUSG00000022973Synj110098.557ENSPEMG00000018767Synj110098.557Peromyscus_maniculatus_bairdii
ENSMUSG00000022973Synj110064.266ENSPMAG00000002887synj19653.323Petromyzon_marinus
ENSMUSG00000022973Synj110092.785ENSPCIG00000016372SYNJ110085.898Phascolarctos_cinereus
ENSMUSG00000022973Synj110080.966ENSPFOG00000016886synj110065.780Poecilia_formosa
ENSMUSG00000022973Synj110081.871ENSPLAG00000017559synj19764.869Poecilia_latipinna
ENSMUSG00000022973Synj110081.727ENSPMEG00000007643synj18961.772Poecilia_mexicana
ENSMUSG00000022973Synj110082.158ENSPREG00000012412synj19867.680Poecilia_reticulata
ENSMUSG00000022973Synj110096.148ENSPPYG00000011365SYNJ19892.151Pongo_abelii
ENSMUSG00000022973Synj18492.857ENSPCAG00000009906SYNJ18492.857Procavia_capensis
ENSMUSG00000022973Synj18599.465ENSPCOG00000024841SYNJ19987.248Propithecus_coquereli
ENSMUSG00000022973Synj110096.006ENSPVAG00000000892SYNJ110084.284Pteropus_vampyrus
ENSMUSG00000022973Synj110082.590ENSPNYG00000022989synj19769.284Pundamilia_nyererei
ENSMUSG00000022973Synj110082.878ENSPNAG00000021119synj19177.335Pygocentrus_nattereri
ENSMUSG00000022973Synj110098.573ENSRNOG00000002051Synj110097.790Rattus_norvegicus
ENSMUSG00000022973Synj110097.691ENSRBIG00000034477SYNJ110092.988Rhinopithecus_bieti
ENSMUSG00000022973Synj110096.291ENSRROG00000039256SYNJ110092.988Rhinopithecus_roxellana
ENSMUSG00000022973Synj110097.835ENSSBOG00000021001SYNJ110092.612Saimiri_boliviensis_boliviensis
ENSMUSG00000022973Synj110092.063ENSSHAG00000008538SYNJ19777.296Sarcophilus_harrisii
ENSMUSG00000022973Synj110083.165ENSSFOG00015006095synj19562.152Scleropages_formosus
ENSMUSG00000022973Synj110082.014ENSSMAG00000018066synj19566.815Scophthalmus_maximus
ENSMUSG00000022973Synj110083.022ENSSDUG00000013058synj19659.806Seriola_dumerili
ENSMUSG00000022973Synj110082.590ENSSLDG00000021406synj19668.934Seriola_lalandi_dorsalis
ENSMUSG00000022973Synj17694.206ENSSARG00000009490SYNJ17396.053Sorex_araneus
ENSMUSG00000022973Synj110093.362ENSSPUG00000012552SYNJ110073.979Sphenodon_punctatus
ENSMUSG00000022973Synj18983.119ENSSPAG00000006812SYNJ19558.465Stegastes_partitus
ENSMUSG00000022973Synj110083.165ENSSPAG00000017029synj19767.528Stegastes_partitus
ENSMUSG00000022973Synj110097.835ENSSSCG00000012035SYNJ110092.424Sus_scrofa
ENSMUSG00000022973Synj110090.935ENSTGUG00000013445SYNJ110076.208Taeniopygia_guttata
ENSMUSG00000022973Synj110082.014ENSTRUG00000006907synj19363.433Takifugu_rubripes
ENSMUSG00000022973Synj110076.999ENSTNIG00000009940synj110066.133Tetraodon_nigroviridis
ENSMUSG00000022973Synj19299.465ENSTBEG00000016298SYNJ19286.858Tupaia_belangeri
ENSMUSG00000022973Synj110089.872ENSTTRG00000002222SYNJ110078.129Tursiops_truncatus
ENSMUSG00000022973Synj110097.691ENSUAMG00000018606SYNJ19995.322Ursus_americanus
ENSMUSG00000022973Synj110097.691ENSUMAG00000018419SYNJ19995.322Ursus_maritimus
ENSMUSG00000022973Synj18798.571ENSVPAG00000001241SYNJ18798.571Vicugna_pacos
ENSMUSG00000022973Synj110097.835ENSVVUG00000023125SYNJ110093.364Vulpes_vulpes
ENSMUSG00000022973Synj110085.127ENSXETG00000009899synj110068.831Xenopus_tropicalis
ENSMUSG00000022973Synj110081.081ENSXCOG00000011896synj19769.248Xiphophorus_couchianus
ENSMUSG00000022973Synj110080.797ENSXMAG00000017524synj19768.223Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0004438phosphatidylinositol-3-phosphatase activity-ISOFunction
GO:0004439phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity21873635.IBAFunction
GO:0004439phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity18591654.IMPFunction
GO:0004439phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity-ISOFunction
GO:0005515protein binding18093523.IPIFunction
GO:0005737cytoplasm-ISOComponent
GO:0005874microtubule-ISOComponent
GO:0006836neurotransmitter transport10535736.IMPProcess
GO:0007420brain development21873635.IBAProcess
GO:0007612learning21873635.IBAProcess
GO:0007612learning18591654.IMPProcess
GO:0007612learning-ISOProcess
GO:0008022protein C-terminus binding-ISOFunction
GO:0014015positive regulation of gliogenesis-ISOProcess
GO:0016082synaptic vesicle priming12481038.IMPProcess
GO:0016191synaptic vesicle uncoating10535736.IDAProcess
GO:0016191synaptic vesicle uncoating10535736.12481038.22099461.IMPProcess
GO:0017124SH3 domain binding21873635.IBAFunction
GO:0017124SH3 domain binding-ISOFunction
GO:0030117membrane coat11879655.IDAComponent
GO:0030118clathrin coat10535736.TASComponent
GO:0030132clathrin coat of coated pit-ISOComponent
GO:0032526response to retinoic acid-ISOProcess
GO:0032991protein-containing complex-ISOComponent
GO:0034097response to cytokine-ISOProcess
GO:0034595phosphatidylinositol phosphate 5-phosphatase activity18093523.IMPFunction
GO:0034595phosphatidylinositol phosphate 5-phosphatase activity-ISOFunction
GO:0043005neuron projection-ISOComponent
GO:0043812phosphatidylinositol-4-phosphate phosphatase activity-ISOFunction
GO:0044877protein-containing complex binding-ISOFunction
GO:0046488phosphatidylinositol metabolic process10535736.IMPProcess
GO:0046488phosphatidylinositol metabolic process10773674.TASProcess
GO:0046855inositol phosphate dephosphorylation21873635.IBAProcess
GO:0046855inositol phosphate dephosphorylation10535736.IMPProcess
GO:0046856phosphatidylinositol dephosphorylation21873635.IBAProcess
GO:0046856phosphatidylinositol dephosphorylation10535736.18591654.IMPProcess
GO:0046856phosphatidylinositol dephosphorylation-ISOProcess
GO:0048015phosphatidylinositol-mediated signaling10773674.TASProcess
GO:0048260positive regulation of receptor-mediated endocytosis-ISOProcess
GO:0048471perinuclear region of cytoplasm21873635.IBAComponent
GO:0048488synaptic vesicle endocytosis21873635.IBAProcess
GO:0048488synaptic vesicle endocytosis18093523.IMPProcess
GO:0048488synaptic vesicle endocytosis-ISOProcess
GO:0048489synaptic vesicle transport10535736.IMPProcess
GO:0052658inositol-1,4,5-trisphosphate 5-phosphatase activity-ISOFunction
GO:0097060synaptic membrane-ISOComponent
GO:0098685Schaffer collateral - CA1 synapse10535736.IDAComponent
GO:0098685Schaffer collateral - CA1 synapse10535736.IMPComponent
GO:0098688parallel fiber to Purkinje cell synapse-ISOComponent
GO:0098793presynapse21873635.IBAComponent
GO:0098793presynapse-ISOComponent
GO:0098884postsynaptic neurotransmitter receptor internalization18987319.IMPProcess
GO:0098978glutamatergic synapse18987319.EXPComponent
GO:0098978glutamatergic synapse18987319.IDAComponent
GO:0098978glutamatergic synapse18987319.IMPComponent
GO:0099149regulation of postsynaptic neurotransmitter receptor internalization18987319.EXPProcess
GO:0099149regulation of postsynaptic neurotransmitter receptor internalization18987319.IDAProcess
GO:0099149regulation of postsynaptic neurotransmitter receptor internalization18987319.IMPProcess
GO:1903423positive regulation of synaptic vesicle recycling23804577.TASProcess
GO:1904980positive regulation of endosome organization-ISOProcess
GO:1990175EH domain binding-ISOFunction

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