EuRBPDB

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  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000023079 (Gene tree)
Gene ID
57080
Gene Symbol
Gtf2ird1
Alias
Alb-c-myc line 166.8|Alb/c-myc line 166.8|BEN|Cream1|ESTM9|GTF3|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|binding factor for early enhancer|c-myc line 166.8
Full Name
general transcription factor II I repeat domain-containing 1
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Minus strand
Length
99061
Position
chr5: 134357656-134456716
Accession
1861942
RBP type
non-canonical RBP
Summary
-
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000201441-786-ENSMUSP00000144447262 (aa)-A0A0J9YV21
ENSMUST00000201447-579-ENSMUSP00000144222193 (aa)-A0A0J9YUK2
ENSMUST00000201526-604-ENSMUSP0000014450266 (aa)-A0A0J9YV59
ENSMUST00000202554-3514XM_006504466ENSMUSP000001438091058 (aa)XP_006504529Q9JI57
ENSMUST00000111245-3299-ENSMUSP000001068761026 (aa)-Q9JI57
ENSMUST00000202829-1080-ENSMUSP00000144604345 (aa)-Q80ZG9
ENSMUST00000201608-288--- (aa)--
ENSMUST00000202414-2506--- (aa)--
ENSMUST00000201495-801-ENSMUSP0000014400338 (aa)-A0A0J9YU48
ENSMUST00000202104-676-ENSMUSP00000144203167 (aa)-A0A0J9YUI9
ENSMUST00000171794-3524XM_011240895ENSMUSP000001293921045 (aa)XP_011239197Q6PD35
ENSMUST00000100654-3156-ENSMUSP00000098219974 (aa)-Q9JI57
ENSMUST00000073161-3572XM_011240892ENSMUSP000000729041072 (aa)XP_011239194Q9JI57
ENSMUST00000100650-3487XM_011240891ENSMUSP000000982151077 (aa)XP_011239193Q9JI57
ENSMUST00000100652-3693XM_006504462ENSMUSP000000982171104 (aa)XP_006504525Q9JI57
ENSMUST00000202335-3068--- (aa)--
ENSMUST00000202334-741--- (aa)--
ENSMUST00000200817-802--- (aa)--
ENSMUST00000202165-579-ENSMUSP00000144420193 (aa)-A0A0J9YV00
ENSMUST00000202202-810--- (aa)--
ENSMUST00000202763-608--- (aa)--
ENSMUST00000202268-630--- (aa)--
ENSMUST00000200944-3133XM_011240897ENSMUSP00000143848969 (aa)XP_011239199Q9JI57
ENSMUST00000201704-751-ENSMUSP00000144373251 (aa)-A0A0J9YUW7
ENSMUST00000111244-3461-ENSMUSP000001068751045 (aa)-Q6PD35
ENSMUST00000200798-857-ENSMUSP0000014452174 (aa)-A0A0J9YV72
ENSMUST00000201647-361-ENSMUSP0000014439199 (aa)-A0A0J9YUX8
ENSMUST00000202280-3052-ENSMUSP00000143897942 (aa)-A0A0J9YTX7
ENSMUST00000167084-3283-ENSMUSP00000132882969 (aa)-Q9JI57
ENSMUST00000074114-3330XM_011240896ENSMUSP000000737521001 (aa)XP_011239198Q9JI57
ENSMUST00000202321-1439-ENSMUSP0000014394847 (aa)-A0A0J9YU11
Gene Model
Click here to download ENSMUSG00000023079's gene model file
Pathways
Pathway IDPathway NameSource
mmu03022Basal transcription factorsKEGG
mmu04022cGMP-PKG signaling pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000023079's network
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003677DNA binding-IEAFunction
GO:0003700DNA-binding transcription factor activity10861001.IDAFunction
GO:0005634nucleus22899722.IDAComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005829cytosol-ISOComponent
GO:0006366transcription by RNA polymerase II-IEAProcess
GO:0007275multicellular organism development-IEAProcess
GO:0014886transition between slow and fast fiber22899722.IDAProcess

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