EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000023104 (Gene tree)
Gene ID: 19718
Gene Symbol: Rfc2
Alias: 2610008M13Rik|40kDa|Recc2
Full Name: replication factor C (activator 1) 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 20440
Position: chr5: 134581366-134601805
Accession: 1341868
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000201464	-	831	-	-	- (aa)	-	-
ENSMUST00000201674	-	967	-	-	- (aa)	-	-
ENSMUST00000200767	-	738	-	-	- (aa)	-	-
ENSMUST00000202761	-	655	-	-	- (aa)	-	-
ENSMUST00000023867	-	4995	-	ENSMUSP00000023867	349 (aa)	-	Q9WUK4
ENSMUST00000201258	-	671	-	ENSMUSP00000144516	43 (aa)	-	A0A0J9YV68

Gene Model

Click here to download ENSMUSG00000023104's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03030	DNA replication	KEGG
mmu03420	Nucleotide excision repair	KEGG
mmu03430	Mismatch repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000023104's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000023104	Rfc2	100	91.243	ENSG00000049541	RFC2	98	96.356	Homo_sapiens
ENSMUSG00000023104	Rfc2	89	60.897	YOL094C		96	60.897	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003689	DNA clamp loader activity	21873635.	IBA	Function
GO:0003689	DNA clamp loader activity	-	ISO	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005663	DNA replication factor C complex	21873635.	IBA	Component
GO:0005663	DNA replication factor C complex	-	ISO	Component
GO:0006260	DNA replication	-	IEA	Process
GO:0006261	DNA-dependent DNA replication	21873635.	IBA	Process
GO:0019899	enzyme binding	24115439.	IPI	Function
GO:0031390	Ctf18 RFC-like complex	-	ISO	Component
GO:0043142	single-stranded DNA-dependent ATPase activity	-	ISO	Function
GO:1900264	positive regulation of DNA-directed DNA polymerase activity	-	ISO	Process