EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000023118 (Gene tree)
Gene ID: 68188
Gene Symbol: Sympk
Alias: 1500016F02Rik|4632415H16Rik
Full Name: symplekin
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 30242 bases
Position: chr7:19024377-19054618
Accession: 1915438
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000023882	Symplekin_C	PF12295.8	1.9e-73	1	1
ENSMUSP00000115900	Symplekin_C	PF12295.8	5.1e-40	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000146903	-	4781	-	ENSMUSP00000138740	234 (aa)	-	S4R2Q3
ENSMUST00000130328	-	469	-	ENSMUSP00000115900	143 (aa)	-	F6UJ99
ENSMUST00000131230	-	636	-	-	- (aa)	-	-
ENSMUST00000137287	-	4760	-	-	- (aa)	-	-
ENSMUST00000153976	-	827	-	ENSMUSP00000121540	198 (aa)	-	D3Z2M2
ENSMUST00000148861	-	1099	-	-	- (aa)	-	-
ENSMUST00000023882	-	4116	XM_006540332	ENSMUSP00000023882	1288 (aa)	XP_006540395	F8WJD4
ENSMUST00000138440	-	799	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000023118's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03015	mRNA surveillance pathway	KEGG
mmu04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000023118's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000023118	Sympk	100	92.564	ENSG00000125755	SYMPK	100	98.592	Homo_sapiens
ENSMUSG00000023118	Sympk	76	87.156	ENSAPOG00000015934	sympk	97	73.451	Acanthochromis_polyacanthus
ENSMUSG00000023118	Sympk	100	92.719	ENSAMEG00000000680	SYMPK	100	92.719	Ailuropoda_melanoleuca
ENSMUSG00000023118	Sympk	76	85.321	ENSACIG00000006357	sympk	92	74.453	Amphilophus_citrinellus
ENSMUSG00000023118	Sympk	76	87.156	ENSAOCG00000024124	sympk	96	71.972	Amphiprion_ocellaris
ENSMUSG00000023118	Sympk	76	87.156	ENSAPEG00000003465	sympk	92	73.333	Amphiprion_percula
ENSMUSG00000023118	Sympk	93	70.438	ENSATEG00000008472	sympk	91	74.260	Anabas_testudineus
ENSMUSG00000023118	Sympk	76	96.330	ENSACAG00000004126	SYMPK	97	78.217	Anolis_carolinensis
ENSMUSG00000023118	Sympk	100	93.106	ENSANAG00000021087	SYMPK	100	99.200	Aotus_nancymaae
ENSMUSG00000023118	Sympk	76	86.239	ENSACLG00000001813	sympk	91	74.057	Astatotilapia_calliptera
ENSMUSG00000023118	Sympk	76	87.156	ENSAMXG00000013677	sympk	91	73.595	Astyanax_mexicanus
ENSMUSG00000023118	Sympk	100	92.254	ENSBTAG00000012101	SYMPK	100	92.486	Bos_taurus
ENSMUSG00000023118	Sympk	95	96.180	ENSCJAG00000012172	SYMPK	99	95.673	Callithrix_jacchus
ENSMUSG00000023118	Sympk	100	93.261	ENSCAFG00000004376	SYMPK	100	93.106	Canis_familiaris
ENSMUSG00000023118	Sympk	100	93.261	ENSCAFG00020001815	SYMPK	100	93.106	Canis_lupus_dingo
ENSMUSG00000023118	Sympk	100	92.641	ENSCHIG00000026784	SYMPK	100	92.641	Capra_hircus
ENSMUSG00000023118	Sympk	100	93.338	ENSTSYG00000006268	SYMPK	100	97.600	Carlito_syrichta
ENSMUSG00000023118	Sympk	83	94.559	ENSCAPG00000005112	SYMPK	96	94.559	Cavia_aperea
ENSMUSG00000023118	Sympk	100	89.308	ENSCPOG00000010434	SYMPK	100	89.077	Cavia_porcellus
ENSMUSG00000023118	Sympk	100	92.874	ENSCCAG00000036309	SYMPK	100	99.200	Cebus_capucinus
ENSMUSG00000023118	Sympk	100	93.029	ENSCATG00000045107	SYMPK	100	98.400	Cercocebus_atys
ENSMUSG00000023118	Sympk	100	92.486	ENSCLAG00000001206	SYMPK	100	92.796	Chinchilla_lanigera
ENSMUSG00000023118	Sympk	100	93.029	ENSCSAG00000003115	SYMPK	100	93.106	Chlorocebus_sabaeus
ENSMUSG00000023118	Sympk	76	99.083	ENSCHOG00000012456	SYMPK	81	100.000	Choloepus_hoffmanni
ENSMUSG00000023118	Sympk	98	82.275	ENSCPBG00000007170	SYMPK	99	82.886	Chrysemys_picta_bellii
ENSMUSG00000023118	Sympk	76	64.220	ENSCING00000021232	-	96	48.682	Ciona_intestinalis
ENSMUSG00000023118	Sympk	76	63.303	ENSCSAVG00000005154	-	100	47.793	Ciona_savignyi
ENSMUSG00000023118	Sympk	100	90.692	ENSCANG00000040907	SYMPK	100	98.400	Colobus_angolensis_palliatus
ENSMUSG00000023118	Sympk	92	93.607	ENSCGRG00001010086	Sympk	100	93.607	Cricetulus_griseus_chok1gshd
ENSMUSG00000023118	Sympk	76	84.404	ENSCSEG00000016802	sympk	91	73.632	Cynoglossus_semilaevis
ENSMUSG00000023118	Sympk	76	86.239	ENSCVAG00000015093	sympk	81	73.415	Cyprinodon_variegatus
ENSMUSG00000023118	Sympk	76	85.321	ENSDARG00000059553	sympk	89	73.166	Danio_rerio
ENSMUSG00000023118	Sympk	99	92.037	ENSDNOG00000016149	SYMPK	98	92.037	Dasypus_novemcinctus
ENSMUSG00000023118	Sympk	78	54.955	FBgn0037371	Sym	95	36.356	Drosophila_melanogaster
ENSMUSG00000023118	Sympk	76	81.651	ENSEBUG00000000387	sympk	89	62.673	Eptatretus_burgeri
ENSMUSG00000023118	Sympk	100	92.570	ENSEASG00005014227	SYMPK	100	92.957	Equus_asinus_asinus
ENSMUSG00000023118	Sympk	100	92.570	ENSECAG00000008163	SYMPK	100	92.957	Equus_caballus
ENSMUSG00000023118	Sympk	76	98.165	ENSEEUG00000000270	-	81	94.667	Erinaceus_europaeus
ENSMUSG00000023118	Sympk	76	85.321	ENSELUG00000000850	sympk	88	75.067	Esox_lucius
ENSMUSG00000023118	Sympk	98	97.585	ENSFCAG00000007337	SYMPK	100	93.029	Felis_catus
ENSMUSG00000023118	Sympk	100	92.802	ENSFDAG00000011272	SYMPK	100	92.647	Fukomys_damarensis
ENSMUSG00000023118	Sympk	76	85.321	ENSFHEG00000010274	sympk	90	74.659	Fundulus_heteroclitus
ENSMUSG00000023118	Sympk	97	71.329	ENSGMOG00000002357	sympk	99	72.878	Gadus_morhua
ENSMUSG00000023118	Sympk	76	85.321	ENSGAFG00000010976	sympk	91	74.887	Gambusia_affinis
ENSMUSG00000023118	Sympk	76	87.156	ENSGACG00000002735	sympk	98	74.495	Gasterosteus_aculeatus
ENSMUSG00000023118	Sympk	76	95.413	ENSGAGG00000012538	-	88	84.580	Gopherus_agassizii
ENSMUSG00000023118	Sympk	100	92.641	ENSGGOG00000003410	SYMPK	100	98.400	Gorilla_gorilla
ENSMUSG00000023118	Sympk	76	86.239	ENSHBUG00000023564	sympk	91	74.396	Haplochromis_burtoni
ENSMUSG00000023118	Sympk	100	88.932	ENSHGLG00000005228	SYMPK	100	88.932	Heterocephalus_glaber_female
ENSMUSG00000023118	Sympk	100	89.181	ENSHGLG00100018571	SYMPK	100	88.803	Heterocephalus_glaber_male
ENSMUSG00000023118	Sympk	76	86.239	ENSHCOG00000017400	sympk	91	70.394	Hippocampus_comes
ENSMUSG00000023118	Sympk	76	88.073	ENSIPUG00000024020	SYMPK	95	69.174	Ictalurus_punctatus
ENSMUSG00000023118	Sympk	100	93.648	ENSSTOG00000001534	SYMPK	100	93.726	Ictidomys_tridecemlineatus
ENSMUSG00000023118	Sympk	100	92.802	ENSJJAG00000006633	Sympk	100	92.802	Jaculus_jaculus
ENSMUSG00000023118	Sympk	76	84.404	ENSKMAG00000016292	sympk	90	74.771	Kryptolebias_marmoratus
ENSMUSG00000023118	Sympk	76	88.073	ENSLBEG00000027913	sympk	96	70.681	Labrus_bergylta
ENSMUSG00000023118	Sympk	76	93.578	ENSLACG00000016497	SYMPK	100	70.445	Latimeria_chalumnae
ENSMUSG00000023118	Sympk	100	92.486	ENSLAFG00000008726	SYMPK	100	92.564	Loxodonta_africana
ENSMUSG00000023118	Sympk	76	99.083	ENSMFAG00000030093	-	90	87.597	Macaca_fascicularis
ENSMUSG00000023118	Sympk	100	93.029	ENSMMUG00000015428	SYMPK	100	98.400	Macaca_mulatta
ENSMUSG00000023118	Sympk	100	93.184	ENSMNEG00000019439	SYMPK	100	98.400	Macaca_nemestrina
ENSMUSG00000023118	Sympk	100	93.184	ENSMLEG00000040508	SYMPK	100	98.400	Mandrillus_leucophaeus
ENSMUSG00000023118	Sympk	76	85.321	ENSMAMG00000010486	sympk	89	74.587	Mastacembelus_armatus
ENSMUSG00000023118	Sympk	76	86.239	ENSMZEG00005014146	sympk	91	74.057	Maylandia_zebra
ENSMUSG00000023118	Sympk	100	93.944	ENSMAUG00000015657	Sympk	100	93.944	Mesocricetus_auratus
ENSMUSG00000023118	Sympk	100	92.564	ENSMICG00000001871	SYMPK	100	96.800	Microcebus_murinus
ENSMUSG00000023118	Sympk	100	96.739	ENSMOCG00000008388	Sympk	100	96.739	Microtus_ochrogaster
ENSMUSG00000023118	Sympk	76	85.321	ENSMMOG00000019227	sympk	93	72.545	Mola_mola
ENSMUSG00000023118	Sympk	97	86.960	ENSMODG00000021534	SYMPK	96	87.171	Monodelphis_domestica
ENSMUSG00000023118	Sympk	72	69.468	ENSMALG00000008347	sympk	96	69.787	Monopterus_albus
ENSMUSG00000023118	Sympk	100	99.068	MGP_CAROLIEiJ_G0029267	Sympk	100	100.000	Mus_caroli
ENSMUSG00000023118	Sympk	100	98.292	MGP_PahariEiJ_G0021127	Sympk	100	98.592	Mus_pahari
ENSMUSG00000023118	Sympk	100	98.835	MGP_SPRETEiJ_G0030351	-	100	99.296	Mus_spretus
ENSMUSG00000023118	Sympk	100	91.325	ENSMPUG00000005505	SYMPK	100	91.325	Mustela_putorius_furo
ENSMUSG00000023118	Sympk	76	99.083	ENSMLUG00000001359	SYMPK	100	89.226	Myotis_lucifugus
ENSMUSG00000023118	Sympk	100	94.798	ENSNGAG00000000820	Sympk	100	94.720	Nannospalax_galili
ENSMUSG00000023118	Sympk	76	85.321	ENSNBRG00000018101	sympk	92	74.977	Neolamprologus_brichardi
ENSMUSG00000023118	Sympk	100	79.707	ENSNLEG00000002369	SYMPK	100	80.093	Nomascus_leucogenys
ENSMUSG00000023118	Sympk	76	98.165	ENSMEUG00000003866	SYMPK	80	89.474	Notamacropus_eugenii
ENSMUSG00000023118	Sympk	100	90.402	ENSOPRG00000009967	SYMPK	100	90.635	Ochotona_princeps
ENSMUSG00000023118	Sympk	100	93.421	ENSODEG00000007519	SYMPK	100	93.189	Octodon_degus
ENSMUSG00000023118	Sympk	76	86.239	ENSONIG00000016802	sympk	96	73.784	Oreochromis_niloticus
ENSMUSG00000023118	Sympk	75	96.580	ENSOCUG00000005511	SYMPK	90	96.580	Oryctolagus_cuniculus
ENSMUSG00000023118	Sympk	76	85.321	ENSORLG00000015338	sympk	96	74.234	Oryzias_latipes
ENSMUSG00000023118	Sympk	76	85.321	ENSORLG00020004402	sympk	90	75.297	Oryzias_latipes_hni
ENSMUSG00000023118	Sympk	76	85.321	ENSORLG00015005712	sympk	90	75.389	Oryzias_latipes_hsok
ENSMUSG00000023118	Sympk	76	85.321	ENSOMEG00000022561	sympk	90	75.000	Oryzias_melastigma
ENSMUSG00000023118	Sympk	100	93.648	ENSOGAG00000013483	SYMPK	100	93.726	Otolemur_garnettii
ENSMUSG00000023118	Sympk	100	87.837	ENSOARG00000010349	SYMPK	100	87.932	Ovis_aries
ENSMUSG00000023118	Sympk	100	92.564	ENSPPAG00000043204	SYMPK	100	98.400	Pan_paniscus
ENSMUSG00000023118	Sympk	100	92.951	ENSPPRG00000004282	SYMPK	100	93.029	Panthera_pardus
ENSMUSG00000023118	Sympk	100	90.705	ENSPTIG00000015420	SYMPK	94	97.585	Panthera_tigris_altaica
ENSMUSG00000023118	Sympk	100	92.564	ENSPTRG00000011169	SYMPK	100	98.400	Pan_troglodytes
ENSMUSG00000023118	Sympk	100	92.951	ENSPANG00000019930	SYMPK	100	98.400	Papio_anubis
ENSMUSG00000023118	Sympk	76	87.156	ENSPKIG00000017132	sympk	96	72.458	Paramormyrops_kingsleyae
ENSMUSG00000023118	Sympk	100	96.664	ENSPEMG00000007564	Sympk	100	96.664	Peromyscus_maniculatus_bairdii
ENSMUSG00000023118	Sympk	76	84.404	ENSPMAG00000004936	sympk	100	65.484	Petromyzon_marinus
ENSMUSG00000023118	Sympk	98	86.385	ENSPCIG00000024476	SYMPK	99	85.648	Phascolarctos_cinereus
ENSMUSG00000023118	Sympk	76	85.321	ENSPFOG00000001194	sympk	90	74.819	Poecilia_formosa
ENSMUSG00000023118	Sympk	76	85.321	ENSPLAG00000012995	sympk	90	74.728	Poecilia_latipinna
ENSMUSG00000023118	Sympk	76	85.321	ENSPMEG00000008099	sympk	90	74.728	Poecilia_mexicana
ENSMUSG00000023118	Sympk	76	85.321	ENSPREG00000006176	sympk	90	74.977	Poecilia_reticulata
ENSMUSG00000023118	Sympk	86	96.942	ENSPPYG00000010135	SYMPK	99	96.942	Pongo_abelii
ENSMUSG00000023118	Sympk	94	89.708	ENSPCAG00000005182	SYMPK	94	89.708	Procavia_capensis
ENSMUSG00000023118	Sympk	100	93.261	ENSPCOG00000023740	SYMPK	100	98.400	Propithecus_coquereli
ENSMUSG00000023118	Sympk	98	92.277	ENSPVAG00000001355	SYMPK	100	92.357	Pteropus_vampyrus
ENSMUSG00000023118	Sympk	76	86.239	ENSPNYG00000011455	sympk	90	74.306	Pundamilia_nyererei
ENSMUSG00000023118	Sympk	89	73.190	ENSPNAG00000016505	sympk	89	75.090	Pygocentrus_nattereri
ENSMUSG00000023118	Sympk	100	97.904	ENSRNOG00000014353	Sympk	100	97.904	Rattus_norvegicus
ENSMUSG00000023118	Sympk	100	92.260	ENSRBIG00000040963	SYMPK	100	98.400	Rhinopithecus_bieti
ENSMUSG00000023118	Sympk	100	93.106	ENSRROG00000024834	SYMPK	97	97.568	Rhinopithecus_roxellana
ENSMUSG00000023118	Sympk	100	92.874	ENSSBOG00000034497	SYMPK	100	99.200	Saimiri_boliviensis_boliviensis
ENSMUSG00000023118	Sympk	90	89.460	ENSSHAG00000003139	SYMPK	99	89.460	Sarcophilus_harrisii
ENSMUSG00000023118	Sympk	76	87.156	ENSSFOG00015006974	sympk	90	75.825	Scleropages_formosus
ENSMUSG00000023118	Sympk	76	85.321	ENSSMAG00000018130	sympk	72	74.182	Scophthalmus_maximus
ENSMUSG00000023118	Sympk	93	70.165	ENSSDUG00000007092	sympk	91	74.011	Seriola_dumerili
ENSMUSG00000023118	Sympk	93	70.165	ENSSLDG00000014774	sympk	96	71.653	Seriola_lalandi_dorsalis
ENSMUSG00000023118	Sympk	76	99.083	ENSSARG00000004274	-	66	100.000	Sorex_araneus
ENSMUSG00000023118	Sympk	97	81.452	ENSSPUG00000002789	SYMPK	96	81.020	Sphenodon_punctatus
ENSMUSG00000023118	Sympk	76	87.156	ENSSPAG00000000854	sympk	90	74.278	Stegastes_partitus
ENSMUSG00000023118	Sympk	100	93.029	ENSSSCG00000003093	SYMPK	100	93.029	Sus_scrofa
ENSMUSG00000023118	Sympk	86	73.948	ENSTRUG00000010202	sympk	91	74.077	Takifugu_rubripes
ENSMUSG00000023118	Sympk	76	83.486	ENSTNIG00000017855	sympk	98	73.333	Tetraodon_nigroviridis
ENSMUSG00000023118	Sympk	87	94.156	ENSTBEG00000000454	SYMPK	88	94.156	Tupaia_belangeri
ENSMUSG00000023118	Sympk	100	84.741	ENSTTRG00000014311	SYMPK	100	84.741	Tursiops_truncatus
ENSMUSG00000023118	Sympk	100	90.782	ENSUAMG00000022272	SYMPK	95	96.805	Ursus_americanus
ENSMUSG00000023118	Sympk	100	92.874	ENSUMAG00000023698	SYMPK	100	92.951	Ursus_maritimus
ENSMUSG00000023118	Sympk	88	96.306	ENSVVUG00000003024	SYMPK	99	96.306	Vulpes_vulpes
ENSMUSG00000023118	Sympk	90	71.784	ENSXETG00000024453	sympk	94	71.870	Xenopus_tropicalis
ENSMUSG00000023118	Sympk	78	84.685	ENSXCOG00000015368	sympk	100	74.098	Xiphophorus_couchianus
ENSMUSG00000023118	Sympk	76	85.321	ENSXMAG00000005737	sympk	90	74.819	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005923	bicellular tight junction	-	IEA	Component
GO:0006378	mRNA polyadenylation	-	ISO	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0007155	cell adhesion	-	IEA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016604	nuclear body	11092755.	IDA	Component
GO:0030054	cell junction	-	IEA	Component
GO:0032091	negative regulation of protein binding	-	ISO	Process
GO:0035307	positive regulation of protein dephosphorylation	-	ISO	Process
GO:0097165	nuclear stress granule	-	ISO	Component