EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000023345 (Gene tree)
Gene ID: 70235
Gene Symbol: Poc1a
Alias: 2510040D07Rik|Wdr51a|cha
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 69461 bases
Position: chr9:106281061-106350521
Accession: 1917485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000149262	eIF2A	PF08662.11	2.6e-10	1	1
ENSMUSP00000140374	eIF2A	PF08662.11	3.4e-10	1	1
ENSMUSP00000072064	eIF2A	PF08662.11	5.9e-10	1	1
ENSMUSP00000148880	eIF2A	PF08662.11	6e-10	1	1
ENSMUSP00000149444	eIF2A	PF08662.11	9e-10	1	1
ENSMUSP00000150549	eIF2A	PF08662.11	1.1e-08	1	1
ENSMUSP00000150865	eIF2A	PF08662.11	1.1e-08	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000188660	-	1521	-	-	- (aa)	-	-
ENSMUST00000189325	-	727	-	-	- (aa)	-	-
ENSMUST00000186366	-	533	-	-	- (aa)	-	-
ENSMUST00000214208	-	1250	-	ENSMUSP00000149262	331 (aa)	-	A0A1L1SR04
ENSMUST00000216306	-	1308	-	ENSMUSP00000149444	428 (aa)	-	A0A1L1SRG3
ENSMUST00000214540	-	1431	-	ENSMUSP00000149273	299 (aa)	-	A0A1L1SR15
ENSMUST00000216228	-	1431	-	ENSMUSP00000150549	367 (aa)	-	A0A1L1SUQ2
ENSMUST00000217213	-	1398	-	ENSMUSP00000150865	367 (aa)	-	A0A1L1SUQ2
ENSMUST00000214483	-	1278	-	ENSMUSP00000148880	394 (aa)	-	A0A1L1SQ32
ENSMUST00000072206	-	2337	XM_006511831	ENSMUSP00000072064	405 (aa)	XP_006511894	Q8JZX3
ENSMUST00000191434	-	1242	XM_006511830	ENSMUSP00000140374	356 (aa)	XP_006511893	Q8JZX3

Gene Model

Click here to download ENSMUSG00000023345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000023345's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000023345	Poc1a	87	31.111	ENSMUSG00000066148	Prpf4	56	32.456
ENSMUSG00000023345	Poc1a	87	32.394	ENSMUSG00000061559	Wdr61	97	31.658
ENSMUSG00000023345	Poc1a	88	34.109	ENSMUSG00000034379	Wdr5b	93	34.109
ENSMUSG00000023345	Poc1a	95	32.117	ENSMUSG00000033285	Wdr3	61	32.716
ENSMUSG00000023345	Poc1a	87	32.420	ENSMUSG00000041747	Utp15	52	32.218
ENSMUSG00000023345	Poc1a	86	35.659	ENSMUSG00000026917	Wdr5	99	31.000
ENSMUSG00000023345	Poc1a	87	33.663	ENSMUSG00000003662	Ciao1	91	36.082
ENSMUSG00000023345	Poc1a	87	30.418	ENSMUSG00000024735	Prpf19	56	30.418

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000023345	Poc1a	100	91.922	ENSG00000164087	POC1A	100	91.922	Homo_sapiens
ENSMUSG00000023345	Poc1a	98	80.147	ENSAPOG00000002677	POC1A	98	80.147	Acanthochromis_polyacanthus
ENSMUSG00000023345	Poc1a	100	90.515	ENSAMEG00000009136	POC1A	99	90.418	Ailuropoda_melanoleuca
ENSMUSG00000023345	Poc1a	94	84.615	ENSACIG00000018288	poc1a	96	63.765	Amphilophus_citrinellus
ENSMUSG00000023345	Poc1a	98	78.777	ENSAOCG00000001066	POC1A	97	78.808	Amphiprion_ocellaris
ENSMUSG00000023345	Poc1a	98	79.705	ENSAPEG00000005795	poc1a	94	79.705	Amphiprion_percula
ENSMUSG00000023345	Poc1a	91	85.401	ENSAPLG00000007756	POC1A	99	77.307	Anas_platyrhynchos
ENSMUSG00000023345	Poc1a	100	90.244	ENSANAG00000030897	POC1A	100	89.681	Aotus_nancymaae
ENSMUSG00000023345	Poc1a	99	77.597	ENSACLG00000017869	POC1A	98	78.808	Astatotilapia_calliptera
ENSMUSG00000023345	Poc1a	91	80.882	ENSAMXG00000024703	poc1a	97	71.930	Astyanax_mexicanus
ENSMUSG00000023345	Poc1a	100	89.973	ENSBTAG00000001471	POC1A	100	89.973	Bos_taurus
ENSMUSG00000023345	Poc1a	100	91.086	ENSCJAG00000005972	POC1A	100	91.086	Callithrix_jacchus
ENSMUSG00000023345	Poc1a	100	83.990	ENSCAFG00020022379	POC1A	100	83.990	Canis_lupus_dingo
ENSMUSG00000023345	Poc1a	100	90.244	ENSCHIG00000002571	POC1A	100	89.681	Capra_hircus
ENSMUSG00000023345	Poc1a	100	92.758	ENSTSYG00000008302	POC1A	100	92.758	Carlito_syrichta
ENSMUSG00000023345	Poc1a	88	94.118	ENSCAPG00000016201	POC1A	89	80.435	Cavia_aperea
ENSMUSG00000023345	Poc1a	100	90.223	ENSCPOG00000006740	POC1A	100	90.223	Cavia_porcellus
ENSMUSG00000023345	Poc1a	100	90.515	ENSCCAG00000023380	POC1A	100	90.172	Cebus_capucinus
ENSMUSG00000023345	Poc1a	100	89.189	ENSCATG00000021822	POC1A	100	89.189	Cercocebus_atys
ENSMUSG00000023345	Poc1a	99	85.634	ENSCLAG00000010593	POC1A	99	85.634	Chinchilla_lanigera
ENSMUSG00000023345	Poc1a	100	89.702	ENSCSAG00000013862	POC1A	100	89.702	Chlorocebus_sabaeus
ENSMUSG00000023345	Poc1a	86	87.160	ENSCPBG00000016728	POC1A	98	87.085	Chrysemys_picta_bellii
ENSMUSG00000023345	Poc1a	99	64.688	ENSCSAVG00000008477	-	99	66.565	Ciona_savignyi
ENSMUSG00000023345	Poc1a	99	91.854	ENSCANG00000033064	POC1A	99	91.854	Colobus_angolensis_palliatus
ENSMUSG00000023345	Poc1a	99	93.239	ENSCGRG00001007357	Poc1a	99	93.239	Cricetulus_griseus_chok1gshd
ENSMUSG00000023345	Poc1a	98	68.245	ENSCSEG00000010287	POC1A	94	74.503	Cynoglossus_semilaevis
ENSMUSG00000023345	Poc1a	98	70.245	ENSCVAG00000015594	POC1A	97	77.703	Cyprinodon_variegatus
ENSMUSG00000023345	Poc1a	87	61.776	ENSEBUG00000008013	poc1a	85	59.797	Eptatretus_burgeri
ENSMUSG00000023345	Poc1a	86	59.184	ENSEBUG00000008246	POC1A	55	60.000	Eptatretus_burgeri
ENSMUSG00000023345	Poc1a	93	67.260	ENSEBUG00000002614	POC1A	94	66.667	Eptatretus_burgeri
ENSMUSG00000023345	Poc1a	95	77.544	ENSELUG00000015504	poc1a	97	68.464	Esox_lucius
ENSMUSG00000023345	Poc1a	100	92.201	ENSFCAG00000015704	POC1A	100	92.201	Felis_catus
ENSMUSG00000023345	Poc1a	91	82.353	ENSFALG00000008922	POC1A	99	74.138	Ficedula_albicollis
ENSMUSG00000023345	Poc1a	100	89.944	ENSFDAG00000011606	POC1A	100	89.944	Fukomys_damarensis
ENSMUSG00000023345	Poc1a	100	69.900	ENSFHEG00000015504	POC1A	98	72.897	Fundulus_heteroclitus
ENSMUSG00000023345	Poc1a	99	78.470	ENSGALG00000034572	-	95	83.448	Gallus_gallus
ENSMUSG00000023345	Poc1a	91	76.753	ENSGACG00000007015	poc1a	97	68.657	Gasterosteus_aculeatus
ENSMUSG00000023345	Poc1a	96	82.927	ENSGAGG00000014637	POC1A	99	76.980	Gopherus_agassizii
ENSMUSG00000023345	Poc1a	100	91.922	ENSGGOG00000006652	POC1A	100	91.922	Gorilla_gorilla
ENSMUSG00000023345	Poc1a	100	90.782	ENSHGLG00000013436	POC1A	100	90.782	Heterocephalus_glaber_female
ENSMUSG00000023345	Poc1a	100	89.435	ENSHGLG00100003479	POC1A	100	89.435	Heterocephalus_glaber_male
ENSMUSG00000023345	Poc1a	92	75.725	ENSIPUG00000001227	POC1A	95	67.939	Ictalurus_punctatus
ENSMUSG00000023345	Poc1a	100	91.899	ENSSTOG00000002638	POC1A	100	91.899	Ictidomys_tridecemlineatus
ENSMUSG00000023345	Poc1a	100	92.458	ENSJJAG00000018739	Poc1a	100	92.458	Jaculus_jaculus
ENSMUSG00000023345	Poc1a	96	82.143	ENSLBEG00000016119	POC1A	97	72.446	Labrus_bergylta
ENSMUSG00000023345	Poc1a	100	73.397	ENSLACG00000018788	POC1A	98	79.934	Latimeria_chalumnae
ENSMUSG00000023345	Poc1a	91	83.824	ENSLOCG00000013801	poc1a	96	71.535	Lepisosteus_oculatus
ENSMUSG00000023345	Poc1a	99	81.841	ENSLAFG00000028434	POC1A	100	87.375	Loxodonta_africana
ENSMUSG00000023345	Poc1a	100	89.160	ENSMFAG00000001970	POC1A	100	89.160	Macaca_fascicularis
ENSMUSG00000023345	Poc1a	100	89.189	ENSMMUG00000012485	POC1A	100	89.189	Macaca_mulatta
ENSMUSG00000023345	Poc1a	100	89.160	ENSMNEG00000042811	POC1A	100	89.160	Macaca_nemestrina
ENSMUSG00000023345	Poc1a	100	90.808	ENSMLEG00000039574	POC1A	100	90.808	Mandrillus_leucophaeus
ENSMUSG00000023345	Poc1a	98	78.417	ENSMAMG00000014233	POC1A	98	78.967	Mastacembelus_armatus
ENSMUSG00000023345	Poc1a	99	77.597	ENSMZEG00005013503	POC1A	98	78.808	Maylandia_zebra
ENSMUSG00000023345	Poc1a	95	82.581	ENSMGAG00000001628	POC1A	99	67.338	Meleagris_gallopavo
ENSMUSG00000023345	Poc1a	99	95.211	ENSMAUG00000017403	Poc1a	99	95.211	Mesocricetus_auratus
ENSMUSG00000023345	Poc1a	100	92.201	ENSMICG00000002709	POC1A	100	92.201	Microcebus_murinus
ENSMUSG00000023345	Poc1a	97	94.828	ENSMOCG00000003396	Poc1a	100	94.102	Microtus_ochrogaster
ENSMUSG00000023345	Poc1a	98	66.942	ENSMMOG00000010427	poc1a	94	66.917	Mola_mola
ENSMUSG00000023345	Poc1a	100	82.333	ENSMODG00000011717	POC1A	96	77.838	Monodelphis_domestica
ENSMUSG00000023345	Poc1a	98	73.950	ENSMALG00000009054	poc1a	95	73.950	Monopterus_albus
ENSMUSG00000023345	Poc1a	100	99.506	MGP_CAROLIEiJ_G0032617	Poc1a	100	99.506	Mus_caroli
ENSMUSG00000023345	Poc1a	100	99.438	MGP_PahariEiJ_G0015485	Poc1a	100	99.438	Mus_pahari
ENSMUSG00000023345	Poc1a	100	99.753	MGP_SPRETEiJ_G0033763	Poc1a	100	99.753	Mus_spretus
ENSMUSG00000023345	Poc1a	100	90.786	ENSMPUG00000011723	POC1A	100	90.663	Mustela_putorius_furo
ENSMUSG00000023345	Poc1a	100	89.431	ENSMLUG00000015092	POC1A	92	89.409	Myotis_lucifugus
ENSMUSG00000023345	Poc1a	100	92.391	ENSNGAG00000005212	Poc1a	100	92.365	Nannospalax_galili
ENSMUSG00000023345	Poc1a	98	74.237	ENSNBRG00000022135	poc1a	98	78.523	Neolamprologus_brichardi
ENSMUSG00000023345	Poc1a	100	91.365	ENSNLEG00000007084	POC1A	100	91.365	Nomascus_leucogenys
ENSMUSG00000023345	Poc1a	91	96.429	ENSMEUG00000007715	-	79	96.429	Notamacropus_eugenii
ENSMUSG00000023345	Poc1a	100	86.721	ENSOPRG00000008831	POC1A	91	86.828	Ochotona_princeps
ENSMUSG00000023345	Poc1a	100	89.488	ENSODEG00000018290	POC1A	100	89.851	Octodon_degus
ENSMUSG00000023345	Poc1a	99	76.623	ENSONIG00000014378	POC1A	98	77.815	Oreochromis_niloticus
ENSMUSG00000023345	Poc1a	100	88.889	ENSOCUG00000002080	POC1A	100	88.889	Oryctolagus_cuniculus
ENSMUSG00000023345	Poc1a	98	82.143	ENSOMEG00000019834	POC1A	97	61.197	Oryzias_melastigma
ENSMUSG00000023345	Poc1a	99	91.304	ENSOGAG00000032245	POC1A	100	84.634	Otolemur_garnettii
ENSMUSG00000023345	Poc1a	100	89.973	ENSOARG00000006352	POC1A	100	89.435	Ovis_aries
ENSMUSG00000023345	Poc1a	100	91.922	ENSPPAG00000043583	POC1A	100	91.922	Pan_paniscus
ENSMUSG00000023345	Poc1a	100	92.201	ENSPPRG00000003365	POC1A	100	92.201	Panthera_pardus
ENSMUSG00000023345	Poc1a	100	91.057	ENSPTIG00000005388	POC1A	100	91.057	Panthera_tigris_altaica
ENSMUSG00000023345	Poc1a	100	91.922	ENSPTRG00000014989	POC1A	100	91.922	Pan_troglodytes
ENSMUSG00000023345	Poc1a	91	85.662	ENSPSIG00000014809	POC1A	87	86.230	Pelodiscus_sinensis
ENSMUSG00000023345	Poc1a	99	72.148	ENSPMGG00000005356	poc1a	95	69.409	Periophthalmus_magnuspinnatus
ENSMUSG00000023345	Poc1a	96	94.774	ENSPEMG00000024131	Poc1a	100	93.846	Peromyscus_maniculatus_bairdii
ENSMUSG00000023345	Poc1a	96	75.157	ENSPMAG00000000333	poc1a	95	60.579	Petromyzon_marinus
ENSMUSG00000023345	Poc1a	98	80.656	ENSPCIG00000018160	POC1A	99	77.612	Phascolarctos_cinereus
ENSMUSG00000023345	Poc1a	100	90.515	ENSPPYG00000013816	POC1A	100	90.418	Pongo_abelii
ENSMUSG00000023345	Poc1a	100	85.908	ENSPCAG00000002118	POC1A	100	85.749	Procavia_capensis
ENSMUSG00000023345	Poc1a	100	93.036	ENSPCOG00000012625	POC1A	100	93.036	Propithecus_coquereli
ENSMUSG00000023345	Poc1a	95	78.947	ENSPVAG00000012480	POC1A	100	71.007	Pteropus_vampyrus
ENSMUSG00000023345	Poc1a	91	79.336	ENSPNYG00000019517	poc1a	98	78.523	Pundamilia_nyererei
ENSMUSG00000023345	Poc1a	91	82.721	ENSPNAG00000007556	POC1A	97	79.935	Pygocentrus_nattereri
ENSMUSG00000023345	Poc1a	96	97.203	ENSRNOG00000037295	Poc1a	100	92.391	Rattus_norvegicus
ENSMUSG00000023345	Poc1a	100	91.365	ENSRBIG00000031748	POC1A	100	91.365	Rhinopithecus_bieti
ENSMUSG00000023345	Poc1a	100	91.365	ENSRROG00000044472	POC1A	100	91.365	Rhinopithecus_roxellana
ENSMUSG00000023345	Poc1a	100	90.515	ENSSBOG00000027902	POC1A	100	90.515	Saimiri_boliviensis_boliviensis
ENSMUSG00000023345	Poc1a	96	82.143	ENSSMAG00000013505	POC1A	96	68.719	Scophthalmus_maximus
ENSMUSG00000023345	Poc1a	94	82.143	ENSSDUG00000016161	POC1A	97	63.596	Seriola_dumerili
ENSMUSG00000023345	Poc1a	98	78.295	ENSSLDG00000003828	POC1A	97	78.146	Seriola_lalandi_dorsalis
ENSMUSG00000023345	Poc1a	93	83.456	ENSSPUG00000008656	POC1A	99	65.860	Sphenodon_punctatus
ENSMUSG00000023345	Poc1a	98	59.305	ENSSPAG00000020330	POC1A	93	59.305	Stegastes_partitus
ENSMUSG00000023345	Poc1a	100	89.702	ENSSSCG00000011426	POC1A	100	89.189	Sus_scrofa
ENSMUSG00000023345	Poc1a	98	78.231	ENSTGUG00000006036	POC1A	99	73.684	Taeniopygia_guttata
ENSMUSG00000023345	Poc1a	89	73.208	ENSTRUG00000007900	POC1A	96	65.169	Takifugu_rubripes
ENSMUSG00000023345	Poc1a	89	74.436	ENSTNIG00000014818	POC1A	98	72.517	Tetraodon_nigroviridis
ENSMUSG00000023345	Poc1a	96	91.003	ENSTTRG00000016798	POC1A	100	86.978	Tursiops_truncatus
ENSMUSG00000023345	Poc1a	100	90.515	ENSUAMG00000020816	POC1A	100	90.418	Ursus_americanus
ENSMUSG00000023345	Poc1a	100	90.515	ENSUMAG00000021482	POC1A	100	90.515	Ursus_maritimus
ENSMUSG00000023345	Poc1a	99	71.812	ENSXETG00000010813	poc1a	95	66.667	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000922	spindle pole	-	ISO	Component
GO:0003431	growth plate cartilage chondrocyte development	26496357.	IMP	Process
GO:0003674	molecular_function	-	ND	Function
GO:0005737	cytoplasm	26496357.	IDA	Component
GO:0005813	centrosome	26496357.	IDA	Component
GO:0005813	centrosome	-	ISO	Component
GO:0005814	centriole	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0007052	mitotic spindle organization	26496357.	IMP	Process
GO:0007283	spermatogenesis	26496357.	IMP	Process
GO:0010825	positive regulation of centrosome duplication	26496357.	IMP	Process
GO:0030030	cell projection organization	-	IEA	Process
GO:0036064	ciliary basal body	-	ISO	Component
GO:0042995	cell projection	-	IEA	Component
GO:0060348	bone development	26496357.	IMP	Process
GO:1905515	non-motile cilium assembly	26496357.	IMP	Process