EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000023460 (Gene tree)
Gene ID: 19328
Gene Symbol: Rab12
Alias: 2900054P15Rik
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 25218 bases
Position: chr17:66494512-66519729
Accession: 894284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000128645	MMR_HSR1	PF01926.23	4.8e-07	1	1
ENSMUSP00000070134	MMR_HSR1	PF01926.23	7.3e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000146279	-	669	-	-	- (aa)	-	-
ENSMUST00000135620	-	381	-	-	- (aa)	-	-
ENSMUST00000070538	-	2069	-	ENSMUSP00000070134	291 (aa)	-	A2CG35
ENSMUST00000155026	-	629	-	-	- (aa)	-	-
ENSMUST00000167962	-	2010	-	ENSMUSP00000128645	243 (aa)	-	P35283

Gene Model

Click here to download ENSMUSG00000023460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000023460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000023460	Rab12	71	51.744	ENSMUSG00000027935	Rab13	85	51.744
ENSMUSG00000023460	Rab12	84	37.736	ENSMUSG00000077450	Rab11b	93	44.203
ENSMUSG00000023460	Rab12	64	31.210	ENSMUSG00000032470	Mras	80	31.548
ENSMUSG00000023460	Rab12	65	37.107	ENSMUSG00000027519	Rab22a	81	37.107
ENSMUSG00000023460	Rab12	74	47.778	ENSMUSG00000030643	Rab30	94	57.426
ENSMUSG00000023460	Rab12	67	49.697	ENSMUSG00000073639	Rab18	79	49.697
ENSMUSG00000023460	Rab12	82	39.500	ENSMUSG00000022159	Rab2b	80	47.097
ENSMUSG00000023460	Rab12	62	30.464	ENSMUSG00000027852	Nras	97	30.405
ENSMUSG00000023460	Rab12	70	49.704	ENSMUSG00000024870	Rab1b	84	49.704
ENSMUSG00000023460	Rab12	77	36.316	ENSMUSG00000079477	Rab7	90	48.864
ENSMUSG00000023460	Rab12	76	35.676	ENSMUSG00000064147	Rab44	69	35.676
ENSMUSG00000023460	Rab12	84	37.073	ENSMUSG00000008601	Rab25	79	40.588
ENSMUSG00000023460	Rab12	67	35.329	ENSMUSG00000043463	Rab9b	83	35.329
ENSMUSG00000023460	Rab12	68	35.119	ENSMUSG00000004768	Rab23	69	35.119
ENSMUSG00000023460	Rab12	79	36.869	ENSMUSG00000027739	Rab33b	83	36.224
ENSMUSG00000023460	Rab12	65	39.623	ENSMUSG00000032549	Rab6b	76	39.623
ENSMUSG00000023460	Rab12	70	45.614	ENSMUSG00000029518	Rab35	94	43.455
ENSMUSG00000023460	Rab12	68	42.262	ENSMUSG00000031202	Rab39b	78	42.262
ENSMUSG00000023460	Rab12	84	37.799	ENSMUSG00000004771	Rab11a	90	43.796
ENSMUSG00000023460	Rab12	64	34.194	ENSMUSG00000022621	Rabl2	67	34.194
ENSMUSG00000023460	Rab12	65	30.818	ENSMUSG00000028945	Rheb	85	30.818
ENSMUSG00000023460	Rab12	65	40.252	ENSMUSG00000030704	Rab6a	76	40.252
ENSMUSG00000023460	Rab12	66	43.210	ENSMUSG00000020732	Rab37	75	43.210
ENSMUSG00000023460	Rab12	86	36.321	ENSMUSG00000026878	Rab14	80	39.884
ENSMUSG00000023460	Rab12	86	43.396	ENSMUSG00000021062	Rab15	88	45.213
ENSMUSG00000023460	Rab12	51	31.250	ENSMUSG00000038352	Arl5c	69	31.250
ENSMUSG00000023460	Rab12	90	36.000	ENSMUSG00000019173	Rab5c	86	38.806
ENSMUSG00000023460	Rab12	74	42.308	ENSMUSG00000047187	Rab2a	85	42.308
ENSMUSG00000023460	Rab12	73	33.023	ENSMUSG00000002059	Rab34	75	38.000
ENSMUSG00000023460	Rab12	63	31.373	ENSMUSG00000030265	Kras	87	31.325
ENSMUSG00000023460	Rab12	51	30.597	ENSMUSG00000036093	Arl5a	69	30.597
ENSMUSG00000023460	Rab12	78	46.561	ENSMUSG00000020149	Rab1a	83	50.296
ENSMUSG00000023460	Rab12	83	30.583	ENSMUSG00000079316	Rab9	83	34.132
ENSMUSG00000023460	Rab12	51	31.159	ENSMUSG00000017418	Arl5b	68	31.159
ENSMUSG00000023460	Rab12	75	37.696	ENSMUSG00000031104	Rab33a	68	41.104
ENSMUSG00000023460	Rab12	64	38.462	ENSMUSG00000056515	Rab31	79	38.462
ENSMUSG00000023460	Rab12	76	35.326	ENSMUSG00000000711	Rab5b	85	35.326
ENSMUSG00000023460	Rab12	74	37.989	ENSMUSG00000017831	Rab5a	81	37.989

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000023460	Rab12	100	95.902	ENSG00000206418	RAB12	100	95.902	Homo_sapiens
ENSMUSG00000023460	Rab12	91	90.541	ENSAMEG00000007452	RAB12	100	88.362	Ailuropoda_melanoleuca
ENSMUSG00000023460	Rab12	92	88.789	ENSACIG00000020616	rab12	93	84.211	Amphilophus_citrinellus
ENSMUSG00000023460	Rab12	100	83.740	ENSAOCG00000002130	rab12	93	84.581	Amphiprion_ocellaris
ENSMUSG00000023460	Rab12	100	83.740	ENSAPEG00000013255	rab12	93	84.581	Amphiprion_percula
ENSMUSG00000023460	Rab12	100	84.490	ENSATEG00000019683	rab12	93	85.398	Anabas_testudineus
ENSMUSG00000023460	Rab12	91	97.738	ENSACAG00000003360	RAB12	100	87.984	Anolis_carolinensis
ENSMUSG00000023460	Rab12	100	84.146	ENSACLG00000007696	rab12	93	85.022	Astatotilapia_calliptera
ENSMUSG00000023460	Rab12	92	86.607	ENSAMXG00000004882	rab12	93	80.870	Astyanax_mexicanus
ENSMUSG00000023460	Rab12	100	97.541	ENSBTAG00000010356	RAB12	100	97.541	Bos_taurus
ENSMUSG00000023460	Rab12	100	95.510	ENSCJAG00000015468	RAB12	100	80.294	Callithrix_jacchus
ENSMUSG00000023460	Rab12	100	96.311	ENSCAFG00020023721	RAB12	100	91.468	Canis_lupus_dingo
ENSMUSG00000023460	Rab12	100	97.541	ENSCHIG00000016103	RAB12	100	97.541	Capra_hircus
ENSMUSG00000023460	Rab12	86	98.571	ENSCPOG00000022689	RAB12	100	98.571	Cavia_porcellus
ENSMUSG00000023460	Rab12	100	95.510	ENSCCAG00000022862	RAB12	100	95.510	Cebus_capucinus
ENSMUSG00000023460	Rab12	96	97.009	ENSCATG00000037784	RAB12	97	97.009	Cercocebus_atys
ENSMUSG00000023460	Rab12	100	94.355	ENSCSAG00000017569	RAB12	100	78.613	Chlorocebus_sabaeus
ENSMUSG00000023460	Rab12	100	91.429	ENSCPBG00000028375	RAB12	100	91.429	Chrysemys_picta_bellii
ENSMUSG00000023460	Rab12	91	98.636	ENSCANG00000031453	RAB12	100	98.636	Colobus_angolensis_palliatus
ENSMUSG00000023460	Rab12	100	97.942	ENSCGRG00001006958	Rab12	100	95.563	Cricetulus_griseus_chok1gshd
ENSMUSG00000023460	Rab12	100	83.740	ENSCSEG00000016933	rab12	100	80.894	Cynoglossus_semilaevis
ENSMUSG00000023460	Rab12	92	88.341	ENSCVAG00000003539	rab12	93	84.348	Cyprinodon_variegatus
ENSMUSG00000023460	Rab12	100	82.716	ENSDARG00000089428	rab12	93	82.589	Danio_rerio
ENSMUSG00000023460	Rab12	100	96.296	ENSDNOG00000046064	RAB12	73	82.759	Dasypus_novemcinctus
ENSMUSG00000023460	Rab12	93	98.238	ENSDORG00000008920	Rab12	100	98.238	Dipodomys_ordii
ENSMUSG00000023460	Rab12	80	66.667	ENSEBUG00000006581	rab12	93	66.667	Eptatretus_burgeri
ENSMUSG00000023460	Rab12	100	96.708	ENSEASG00005002926	RAB12	100	91.438	Equus_asinus_asinus
ENSMUSG00000023460	Rab12	100	96.708	ENSECAG00000007384	RAB12	100	80.352	Equus_caballus
ENSMUSG00000023460	Rab12	100	80.658	ENSELUG00000007123	rab12	93	81.250	Esox_lucius
ENSMUSG00000023460	Rab12	100	96.311	ENSFCAG00000027710	RAB12	100	81.121	Felis_catus
ENSMUSG00000023460	Rab12	90	88.128	ENSFHEG00000004319	rab12	93	82.969	Fundulus_heteroclitus
ENSMUSG00000023460	Rab12	85	83.575	ENSGMOG00000012335	rab12	87	83.575	Gadus_morhua
ENSMUSG00000023460	Rab12	100	89.412	ENSGALG00000033608	RAB12	100	92.400	Gallus_gallus
ENSMUSG00000023460	Rab12	83	86.070	ENSGACG00000016639	rab12	100	81.166	Gasterosteus_aculeatus
ENSMUSG00000023460	Rab12	100	91.429	ENSGAGG00000007278	RAB12	100	91.429	Gopherus_agassizii
ENSMUSG00000023460	Rab12	100	84.146	ENSHBUG00000008497	rab12	93	85.022	Haplochromis_burtoni
ENSMUSG00000023460	Rab12	99	85.950	ENSHGLG00000006189	RAB12	90	89.669	Heterocephalus_glaber_female
ENSMUSG00000023460	Rab12	100	81.301	ENSHCOG00000012376	rab12	100	78.049	Hippocampus_comes
ENSMUSG00000023460	Rab12	92	86.161	ENSIPUG00000017401	rab12	93	80.702	Ictalurus_punctatus
ENSMUSG00000023460	Rab12	93	96.476	ENSSTOG00000025122	RAB12	100	96.476	Ictidomys_tridecemlineatus
ENSMUSG00000023460	Rab12	94	98.246	ENSJJAG00000019064	Rab12	100	98.246	Jaculus_jaculus
ENSMUSG00000023460	Rab12	100	81.893	ENSKMAG00000020056	rab12	93	82.589	Kryptolebias_marmoratus
ENSMUSG00000023460	Rab12	100	84.490	ENSLBEG00000013756	rab12	93	85.398	Labrus_bergylta
ENSMUSG00000023460	Rab12	92	90.135	ENSLACG00000010461	RAB12	100	83.133	Latimeria_chalumnae
ENSMUSG00000023460	Rab12	95	87.931	ENSLOCG00000002680	rab12	100	84.337	Lepisosteus_oculatus
ENSMUSG00000023460	Rab12	100	95.122	ENSMFAG00000043551	RAB12	100	95.122	Macaca_fascicularis
ENSMUSG00000023460	Rab12	95	97.414	ENSMNEG00000040853	RAB12	92	97.414	Macaca_nemestrina
ENSMUSG00000023460	Rab12	100	84.082	ENSMAMG00000006862	rab12	93	84.956	Mastacembelus_armatus
ENSMUSG00000023460	Rab12	100	84.146	ENSMZEG00005024316	rab12	93	85.022	Maylandia_zebra
ENSMUSG00000023460	Rab12	84	98.529	ENSMGAG00000009197	RAB12	100	98.529	Meleagris_gallopavo
ENSMUSG00000023460	Rab12	100	98.354	ENSMAUG00000008371	Rab12	100	95.918	Mesocricetus_auratus
ENSMUSG00000023460	Rab12	92	97.768	ENSMICG00000030661	RAB12	99	95.339	Microcebus_murinus
ENSMUSG00000023460	Rab12	90	98.630	ENSMOCG00000000452	Rab12	100	98.630	Microtus_ochrogaster
ENSMUSG00000023460	Rab12	100	94.309	ENSMODG00000021452	RAB12	100	78.529	Monodelphis_domestica
ENSMUSG00000023460	Rab12	92	86.161	ENSMALG00000015762	rab12	93	83.628	Monopterus_albus
ENSMUSG00000023460	Rab12	100	100.000	MGP_CAROLIEiJ_G0021839	Rab12	100	100.000	Mus_caroli
ENSMUSG00000023460	Rab12	100	100.000	MGP_PahariEiJ_G0020826	Rab12	100	100.000	Mus_pahari
ENSMUSG00000023460	Rab12	100	100.000	MGP_SPRETEiJ_G0022750	Rab12	100	99.658	Mus_spretus
ENSMUSG00000023460	Rab12	100	95.885	ENSMLUG00000002883	RAB12	100	95.885	Myotis_lucifugus
ENSMUSG00000023460	Rab12	100	84.774	ENSNGAG00000019722	-	100	84.774	Nannospalax_galili
ENSMUSG00000023460	Rab12	94	96.507	ENSNGAG00000024103	-	98	96.507	Nannospalax_galili
ENSMUSG00000023460	Rab12	100	84.146	ENSNBRG00000014428	rab12	93	85.022	Neolamprologus_brichardi
ENSMUSG00000023460	Rab12	100	95.492	ENSNLEG00000006939	RAB12	100	95.492	Nomascus_leucogenys
ENSMUSG00000023460	Rab12	100	95.122	ENSMEUG00000000493	RAB12	100	95.122	Notamacropus_eugenii
ENSMUSG00000023460	Rab12	90	98.630	ENSODEG00000006414	RAB12	100	98.630	Octodon_degus
ENSMUSG00000023460	Rab12	100	84.146	ENSONIG00000018469	rab12	93	85.022	Oreochromis_niloticus
ENSMUSG00000023460	Rab12	100	84.898	ENSORLG00000003902	rab12	93	85.841	Oryzias_latipes
ENSMUSG00000023460	Rab12	100	84.898	ENSORLG00020005131	rab12	93	85.841	Oryzias_latipes_hni
ENSMUSG00000023460	Rab12	100	84.490	ENSORLG00015007869	rab12	93	85.398	Oryzias_latipes_hsok
ENSMUSG00000023460	Rab12	100	84.898	ENSOMEG00000008191	rab12	93	85.841	Oryzias_melastigma
ENSMUSG00000023460	Rab12	86	98.571	ENSOGAG00000028002	RAB12	99	98.571	Otolemur_garnettii
ENSMUSG00000023460	Rab12	86	98.095	ENSOARG00000000728	RAB12	96	91.880	Ovis_aries
ENSMUSG00000023460	Rab12	85	99.029	ENSPPAG00000009152	RAB12	97	99.029	Pan_paniscus
ENSMUSG00000023460	Rab12	100	96.311	ENSPPRG00000024521	RAB12	100	96.311	Panthera_pardus
ENSMUSG00000023460	Rab12	100	95.902	ENSPTRG00000009853	RAB12	100	95.902	Pan_troglodytes
ENSMUSG00000023460	Rab12	100	95.142	ENSPANG00000009320	RAB12	100	95.142	Papio_anubis
ENSMUSG00000023460	Rab12	78	91.579	ENSPKIG00000008579	rab12	93	87.500	Paramormyrops_kingsleyae
ENSMUSG00000023460	Rab12	90	85.780	ENSPMGG00000001890	rab12	93	81.858	Periophthalmus_magnuspinnatus
ENSMUSG00000023460	Rab12	100	98.765	ENSPEMG00000021032	Rab12	100	97.938	Peromyscus_maniculatus_bairdii
ENSMUSG00000023460	Rab12	100	95.122	ENSPCIG00000010453	RAB12	85	78.886	Phascolarctos_cinereus
ENSMUSG00000023460	Rab12	100	81.781	ENSPFOG00000001579	rab12	93	83.333	Poecilia_formosa
ENSMUSG00000023460	Rab12	100	81.781	ENSPLAG00000013594	rab12	93	83.333	Poecilia_latipinna
ENSMUSG00000023460	Rab12	100	81.781	ENSPMEG00000010417	rab12	93	83.333	Poecilia_mexicana
ENSMUSG00000023460	Rab12	100	81.781	ENSPREG00000017487	rab12	93	83.333	Poecilia_reticulata
ENSMUSG00000023460	Rab12	100	95.902	ENSPPYG00000009015	-	100	80.000	Pongo_abelii
ENSMUSG00000023460	Rab12	100	96.721	ENSPCAG00000015007	RAB12	100	96.721	Procavia_capensis
ENSMUSG00000023460	Rab12	100	95.902	ENSPCOG00000019816	RAB12	100	95.902	Propithecus_coquereli
ENSMUSG00000023460	Rab12	100	95.902	ENSPVAG00000002757	RAB12	100	95.902	Pteropus_vampyrus
ENSMUSG00000023460	Rab12	100	84.146	ENSPNYG00000023905	rab12	93	85.022	Pundamilia_nyererei
ENSMUSG00000023460	Rab12	100	84.146	ENSPNYG00000005654	rab12	93	85.022	Pundamilia_nyererei
ENSMUSG00000023460	Rab12	92	87.946	ENSPNAG00000015031	rab12	93	81.739	Pygocentrus_nattereri
ENSMUSG00000023460	Rab12	100	91.870	ENSRNOG00000019295	Rab12	100	92.276	Rattus_norvegicus
ENSMUSG00000023460	Rab12	95	97.414	ENSRBIG00000028760	RAB12	99	97.414	Rhinopithecus_bieti
ENSMUSG00000023460	Rab12	94	98.246	ENSRROG00000019249	RAB12	95	98.246	Rhinopithecus_roxellana
ENSMUSG00000023460	Rab12	87	97.642	ENSSBOG00000021125	RAB12	81	97.642	Saimiri_boliviensis_boliviensis
ENSMUSG00000023460	Rab12	92	93.363	ENSSHAG00000001489	RAB12	100	93.363	Sarcophilus_harrisii
ENSMUSG00000023460	Rab12	90	87.671	ENSSMAG00000012678	rab12	93	84.071	Scophthalmus_maximus
ENSMUSG00000023460	Rab12	100	84.490	ENSSDUG00000008505	rab12	93	85.398	Seriola_dumerili
ENSMUSG00000023460	Rab12	100	84.490	ENSSLDG00000022239	rab12	93	85.398	Seriola_lalandi_dorsalis
ENSMUSG00000023460	Rab12	100	91.057	ENSSPUG00000003222	RAB12	100	93.089	Sphenodon_punctatus
ENSMUSG00000023460	Rab12	100	84.146	ENSSPAG00000010822	rab12	93	85.022	Stegastes_partitus
ENSMUSG00000023460	Rab12	100	96.721	ENSSSCG00000038026	RAB12	100	96.721	Sus_scrofa
ENSMUSG00000023460	Rab12	93	96.916	ENSTGUG00000009889	RAB12	100	91.600	Taeniopygia_guttata
ENSMUSG00000023460	Rab12	100	82.449	ENSTRUG00000024455	rab12	93	83.186	Takifugu_rubripes
ENSMUSG00000023460	Rab12	100	82.857	ENSTNIG00000014859	rab12	93	83.186	Tetraodon_nigroviridis
ENSMUSG00000023460	Rab12	91	98.198	ENSTTRG00000008711	RAB12	100	98.198	Tursiops_truncatus
ENSMUSG00000023460	Rab12	100	96.311	ENSUAMG00000018092	RAB12	100	96.311	Ursus_americanus
ENSMUSG00000023460	Rab12	90	98.630	ENSVVUG00000011748	RAB12	99	98.630	Vulpes_vulpes
ENSMUSG00000023460	Rab12	95	92.275	ENSXETG00000004289	rab12	82	85.938	Xenopus_tropicalis
ENSMUSG00000023460	Rab12	100	81.781	ENSXCOG00000019310	rab12	100	79.757	Xiphophorus_couchianus
ENSMUSG00000023460	Rab12	100	82.186	ENSXMAG00000023617	rab12	93	83.772	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000139	Golgi membrane	21873635.	IBA	Component
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005764	lysosome	21718402.	IDA	Component
GO:0005768	endosome	-	IEA	Component
GO:0005776	autophagosome	23357852.	IDA	Component
GO:0005789	endoplasmic reticulum membrane	21873635.	IBA	Component
GO:0005794	Golgi apparatus	-	IEA	Component
GO:0005802	trans-Golgi network	21873635.	IBA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006888	ER to Golgi vesicle-mediated transport	21873635.	IBA	Process
GO:0006914	autophagy	-	IEA	Process
GO:0008333	endosome to lysosome transport	21718402.	IMP	Process
GO:0015031	protein transport	-	IEA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016239	positive regulation of macroautophagy	23357852.	IMP	Process
GO:0019003	GDP binding	-	ISO	Function
GO:0030141	secretory granule	-	ISO	Component
GO:0031410	cytoplasmic vesicle	-	IEA	Component
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0044257	cellular protein catabolic process	21718402.	IMP	Process
GO:0045335	phagocytic vesicle	19144319.	IDA	Component
GO:0055038	recycling endosome membrane	21718402.	IDA	Component
GO:0071346	cellular response to interferon-gamma	19144319.	IDA	Process