EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000023805 (Gene tree)
Gene ID: 20975
Gene Symbol: Synj2
Alias: SJ2
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 103011 bases
Position: chr17:5941280-6044290
Accession: 1201671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000120006	Exo_endo_phos	PF03372.23	5.7e-14	1	1
ENSMUSP00000122316	Exo_endo_phos	PF03372.23	5.9e-14	1	1
ENSMUSP00000060382	Exo_endo_phos	PF03372.23	1.6e-13	1	1
ENSMUSP00000111451	Exo_endo_phos	PF03372.23	1.6e-13	1	1
ENSMUSP00000111456	Exo_endo_phos	PF03372.23	2.3e-13	1	1
ENSMUSP00000079164	Exo_endo_phos	PF03372.23	2.6e-13	1	1
ENSMUSP00000111457	Exo_endo_phos	PF03372.23	2.6e-13	1	1
ENSMUSP00000111452	Exo_endo_phos	PF03372.23	1.3e-08	1	1
ENSMUSP00000115371	DUF1866	PF08952.11	3.9e-60	1	1
ENSMUSP00000122316	DUF1866	PF08952.11	1.1e-59	1	1
ENSMUSP00000111451	DUF1866	PF08952.11	2.1e-59	1	1
ENSMUSP00000060382	DUF1866	PF08952.11	2.3e-59	1	1
ENSMUSP00000111456	DUF1866	PF08952.11	2.9e-59	1	1
ENSMUSP00000079164	DUF1866	PF08952.11	3e-59	1	1
ENSMUSP00000111457	DUF1866	PF08952.11	3.1e-59	1	1
ENSMUSP00000120006	DUF1866	PF08952.11	8.3e-11	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000115789	-	5130	-	-	- (aa)	-	-
ENSMUST00000130661	-	460	-	-	- (aa)	-	-
ENSMUST00000134767	-	5533	-	ENSMUSP00000138449	84 (aa)	-	S4R207
ENSMUST00000080283	-	4793	XM_006523205	ENSMUSP00000079164	1434 (aa)	XP_006523268	Q9D2G5
ENSMUST00000115786	-	2531	-	ENSMUSP00000111452	535 (aa)	-	D3YZB5
ENSMUST00000126881	-	1260	-	ENSMUSP00000115371	384 (aa)	-	F6U4I6
ENSMUST00000154114	-	2792	-	ENSMUSP00000122316	725 (aa)	-	F7BI35
ENSMUST00000115785	-	3778	XM_017317372	ENSMUSP00000111451	1118 (aa)	XP_017172861	E9Q4P5
ENSMUST00000115784	-	2634	-	-	- (aa)	-	-
ENSMUST00000115787	-	4013	-	-	- (aa)	-	-
ENSMUST00000142409	-	2513	-	ENSMUSP00000120006	660 (aa)	-	D3YWM9
ENSMUST00000115790	-	4808	XM_006523202	ENSMUSP00000111456	1394 (aa)	XP_006523265	D3YZB2
ENSMUST00000115791	-	5664	XM_006523203	ENSMUSP00000111457	1479 (aa)	XP_006523266	F8WHD8
ENSMUST00000232567	-	808	-	-	- (aa)	-	-
ENSMUST00000061091	-	4072	-	ENSMUSP00000060382	1216 (aa)	-	Q9D2G5
ENSMUST00000115788	-	3498	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000023805's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00562	Inositol phosphate metabolism	KEGG
mmu01100	Metabolic pathways	KEGG
mmu04070	Phosphatidylinositol signaling system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000023805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000023805	Synj2	50	34.421	ENSMUSG00000034570	Inpp5j	55	34.421
ENSMUSG00000023805	Synj2	99	59.581	ENSMUSG00000022973	Synj1	100	59.770
ENSMUSG00000023805	Synj2	58	32.653	ENSMUSG00000001173	Ocrl	50	32.039

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000023805	Synj2	100	93.182	ENSG00000078269	SYNJ2	98	87.619	Homo_sapiens
ENSMUSG00000023805	Synj2	100	91.515	ENSAMEG00000009581	SYNJ2	99	79.778	Ailuropoda_melanoleuca
ENSMUSG00000023805	Synj2	100	84.720	ENSAPLG00000002563	SYNJ2	99	69.205	Anas_platyrhynchos
ENSMUSG00000023805	Synj2	100	81.818	ENSACAG00000004945	SYNJ2	90	70.537	Anolis_carolinensis
ENSMUSG00000023805	Synj2	100	93.041	ENSANAG00000026575	SYNJ2	98	87.609	Aotus_nancymaae
ENSMUSG00000023805	Synj2	100	90.166	ENSBTAG00000000817	SYNJ2	99	80.914	Bos_taurus
ENSMUSG00000023805	Synj2	100	92.738	ENSCJAG00000003570	SYNJ2	98	87.768	Callithrix_jacchus
ENSMUSG00000023805	Synj2	100	92.273	ENSCAFG00000000644	SYNJ2	99	82.621	Canis_familiaris
ENSMUSG00000023805	Synj2	100	92.273	ENSCAFG00020015809	SYNJ2	95	89.181	Canis_lupus_dingo
ENSMUSG00000023805	Synj2	100	89.394	ENSCHIG00000011077	SYNJ2	99	80.735	Capra_hircus
ENSMUSG00000023805	Synj2	100	92.727	ENSTSYG00000014342	SYNJ2	94	88.405	Carlito_syrichta
ENSMUSG00000023805	Synj2	100	88.860	ENSCAPG00000000287	SYNJ2	100	88.860	Cavia_aperea
ENSMUSG00000023805	Synj2	100	93.485	ENSCPOG00000009144	SYNJ2	100	90.688	Cavia_porcellus
ENSMUSG00000023805	Synj2	100	92.738	ENSCCAG00000025484	SYNJ2	98	87.530	Cebus_capucinus
ENSMUSG00000023805	Synj2	100	93.182	ENSCATG00000042943	SYNJ2	98	87.857	Cercocebus_atys
ENSMUSG00000023805	Synj2	100	93.788	ENSCLAG00000004730	SYNJ2	91	93.869	Chinchilla_lanigera
ENSMUSG00000023805	Synj2	100	93.030	ENSCSAG00000013130	SYNJ2	99	83.634	Chlorocebus_sabaeus
ENSMUSG00000023805	Synj2	56	94.595	ENSCHOG00000000343	-	52	94.595	Choloepus_hoffmanni
ENSMUSG00000023805	Synj2	100	85.023	ENSCPBG00000016273	SYNJ2	98	70.596	Chrysemys_picta_bellii
ENSMUSG00000023805	Synj2	100	93.030	ENSCANG00000040349	SYNJ2	98	88.052	Colobus_angolensis_palliatus
ENSMUSG00000023805	Synj2	100	96.970	ENSCGRG00001004257	Synj2	97	95.807	Cricetulus_griseus_chok1gshd
ENSMUSG00000023805	Synj2	100	96.970	ENSCGRG00000001656	Synj2	100	93.229	Cricetulus_griseus_crigri
ENSMUSG00000023805	Synj2	99	85.281	ENSDNOG00000015900	SYNJ2	97	80.844	Dasypus_novemcinctus
ENSMUSG00000023805	Synj2	100	93.333	ENSDORG00000014128	Synj2	98	81.907	Dipodomys_ordii
ENSMUSG00000023805	Synj2	87	90.141	ENSETEG00000017418	SYNJ2	81	90.580	Echinops_telfairi
ENSMUSG00000023805	Synj2	100	92.879	ENSEASG00005018902	SYNJ2	99	83.634	Equus_asinus_asinus
ENSMUSG00000023805	Synj2	100	92.727	ENSECAG00000012646	SYNJ2	93	83.524	Equus_caballus
ENSMUSG00000023805	Synj2	63	78.571	ENSEEUG00000015796	-	57	78.571	Erinaceus_europaeus
ENSMUSG00000023805	Synj2	100	91.667	ENSFCAG00000010854	SYNJ2	98	86.890	Felis_catus
ENSMUSG00000023805	Synj2	100	81.997	ENSFALG00000012593	SYNJ2	98	68.166	Ficedula_albicollis
ENSMUSG00000023805	Synj2	100	92.273	ENSFDAG00000016352	SYNJ2	97	90.828	Fukomys_damarensis
ENSMUSG00000023805	Synj2	99	84.394	ENSGALG00000013727	SYNJ2	90	74.022	Gallus_gallus
ENSMUSG00000023805	Synj2	100	84.569	ENSGAGG00000009857	SYNJ2	98	70.086	Gopherus_agassizii
ENSMUSG00000023805	Synj2	100	93.182	ENSGGOG00000012210	SYNJ2	98	87.857	Gorilla_gorilla
ENSMUSG00000023805	Synj2	100	93.333	ENSHGLG00000007534	SYNJ2	95	91.656	Heterocephalus_glaber_female
ENSMUSG00000023805	Synj2	100	93.333	ENSHGLG00100009973	SYNJ2	100	88.083	Heterocephalus_glaber_male
ENSMUSG00000023805	Synj2	100	94.848	ENSSTOG00000016474	SYNJ2	99	85.058	Ictidomys_tridecemlineatus
ENSMUSG00000023805	Synj2	100	95.303	ENSJJAG00000014436	Synj2	94	90.108	Jaculus_jaculus
ENSMUSG00000023805	Synj2	100	74.699	ENSLACG00000007316	SYNJ2	99	68.327	Latimeria_chalumnae
ENSMUSG00000023805	Synj2	100	89.259	ENSLAFG00000011979	SYNJ2	99	80.243	Loxodonta_africana
ENSMUSG00000023805	Synj2	93	90.694	ENSMFAG00000040552	SYNJ2	99	90.000	Macaca_fascicularis
ENSMUSG00000023805	Synj2	100	93.333	ENSMMUG00000007153	SYNJ2	97	88.235	Macaca_mulatta
ENSMUSG00000023805	Synj2	100	93.485	ENSMNEG00000017211	SYNJ2	98	87.937	Macaca_nemestrina
ENSMUSG00000023805	Synj2	100	86.061	ENSMLEG00000024911	SYNJ2	99	80.428	Mandrillus_leucophaeus
ENSMUSG00000023805	Synj2	99	82.153	ENSMGAG00000012839	SYNJ2	98	73.134	Meleagris_gallopavo
ENSMUSG00000023805	Synj2	100	96.970	ENSMAUG00000022212	Synj2	100	92.969	Mesocricetus_auratus
ENSMUSG00000023805	Synj2	100	91.061	ENSMICG00000015804	SYNJ2	97	86.768	Microcebus_murinus
ENSMUSG00000023805	Synj2	100	96.818	ENSMOCG00000020054	Synj2	99	94.243	Microtus_ochrogaster
ENSMUSG00000023805	Synj2	100	90.758	ENSMODG00000007783	SYNJ2	99	78.185	Monodelphis_domestica
ENSMUSG00000023805	Synj2	100	99.394	MGP_CAROLIEiJ_G0021026	Synj2	100	99.394	Mus_caroli
ENSMUSG00000023805	Synj2	100	99.091	MGP_PahariEiJ_G0023344	Synj2	100	99.091	Mus_pahari
ENSMUSG00000023805	Synj2	100	99.394	MGP_SPRETEiJ_G0021931	Synj2	100	99.394	Mus_spretus
ENSMUSG00000023805	Synj2	100	88.030	ENSMPUG00000005323	SYNJ2	98	83.755	Mustela_putorius_furo
ENSMUSG00000023805	Synj2	100	91.667	ENSMLUG00000000324	SYNJ2	99	80.481	Myotis_lucifugus
ENSMUSG00000023805	Synj2	100	95.606	ENSNGAG00000014859	Synj2	98	93.017	Nannospalax_galili
ENSMUSG00000023805	Synj2	100	90.512	ENSNLEG00000010750	SYNJ2	98	84.123	Nomascus_leucogenys
ENSMUSG00000023805	Synj2	93	85.847	ENSMEUG00000003493	SYNJ2	94	81.897	Notamacropus_eugenii
ENSMUSG00000023805	Synj2	93	87.317	ENSOPRG00000009648	SYNJ2	93	78.947	Ochotona_princeps
ENSMUSG00000023805	Synj2	100	93.636	ENSODEG00000007709	SYNJ2	100	88.860	Octodon_degus
ENSMUSG00000023805	Synj2	90	65.250	ENSOANG00000029828	-	99	59.699	Ornithorhynchus_anatinus
ENSMUSG00000023805	Synj2	100	90.152	ENSOCUG00000004762	SYNJ2	99	80.344	Oryctolagus_cuniculus
ENSMUSG00000023805	Synj2	100	92.296	ENSOGAG00000000488	SYNJ2	100	87.035	Otolemur_garnettii
ENSMUSG00000023805	Synj2	100	89.410	ENSOARG00000004304	SYNJ2	99	79.862	Ovis_aries
ENSMUSG00000023805	Synj2	100	93.333	ENSPPAG00000028831	SYNJ2	99	82.754	Pan_paniscus
ENSMUSG00000023805	Synj2	100	91.818	ENSPPRG00000009068	SYNJ2	98	86.970	Panthera_pardus
ENSMUSG00000023805	Synj2	100	91.364	ENSPTIG00000018780	SYNJ2	94	86.589	Panthera_tigris_altaica
ENSMUSG00000023805	Synj2	100	93.333	ENSPTRG00000018739	SYNJ2	99	88.622	Pan_troglodytes
ENSMUSG00000023805	Synj2	100	93.333	ENSPANG00000010755	SYNJ2	98	87.937	Papio_anubis
ENSMUSG00000023805	Synj2	100	84.418	ENSPSIG00000014659	SYNJ2	98	69.966	Pelodiscus_sinensis
ENSMUSG00000023805	Synj2	100	96.667	ENSPEMG00000006247	Synj2	100	92.987	Peromyscus_maniculatus_bairdii
ENSMUSG00000023805	Synj2	100	89.848	ENSPCIG00000010179	SYNJ2	99	78.185	Phascolarctos_cinereus
ENSMUSG00000023805	Synj2	100	93.485	ENSPPYG00000017130	SYNJ2	99	83.981	Pongo_abelii
ENSMUSG00000023805	Synj2	92	93.548	ENSPCAG00000009217	SYNJ2	90	93.548	Procavia_capensis
ENSMUSG00000023805	Synj2	100	92.273	ENSPCOG00000026910	SYNJ2	97	87.971	Propithecus_coquereli
ENSMUSG00000023805	Synj2	96	89.921	ENSPVAG00000006131	SYNJ2	99	78.129	Pteropus_vampyrus
ENSMUSG00000023805	Synj2	100	95.573	ENSRNOG00000017114	Synj2	100	92.922	Rattus_norvegicus
ENSMUSG00000023805	Synj2	100	92.587	ENSRBIG00000044126	SYNJ2	99	82.579	Rhinopithecus_bieti
ENSMUSG00000023805	Synj2	100	93.030	ENSRROG00000027755	SYNJ2	98	87.778	Rhinopithecus_roxellana
ENSMUSG00000023805	Synj2	100	92.738	ENSSBOG00000034876	SYNJ2	98	87.689	Saimiri_boliviensis_boliviensis
ENSMUSG00000023805	Synj2	100	90.455	ENSSHAG00000018881	SYNJ2	99	77.763	Sarcophilus_harrisii
ENSMUSG00000023805	Synj2	100	83.485	ENSSPUG00000000491	SYNJ2	95	76.426	Sphenodon_punctatus
ENSMUSG00000023805	Synj2	100	91.212	ENSSSCG00000012315	SYNJ2	98	87.290	Sus_scrofa
ENSMUSG00000023805	Synj2	100	80.945	ENSTGUG00000011082	SYNJ2	100	72.342	Taeniopygia_guttata
ENSMUSG00000023805	Synj2	80	84.483	ENSTBEG00000015827	SYNJ2	84	76.577	Tupaia_belangeri
ENSMUSG00000023805	Synj2	100	80.758	ENSTTRG00000009677	SYNJ2	99	77.524	Tursiops_truncatus
ENSMUSG00000023805	Synj2	90	74.745	ENSUAMG00000021958	-	97	74.293	Ursus_americanus
ENSMUSG00000023805	Synj2	88	86.017	ENSUAMG00000026577	-	88	86.017	Ursus_americanus
ENSMUSG00000023805	Synj2	100	87.121	ENSUMAG00000012826	SYNJ2	96	85.639	Ursus_maritimus
ENSMUSG00000023805	Synj2	100	88.759	ENSVVUG00000007407	SYNJ2	99	88.625	Vulpes_vulpes
ENSMUSG00000023805	Synj2	100	75.378	ENSXETG00000034066	synj2	84	65.875	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004439	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	21873635.	IBA	Function
GO:0004439	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	9442075.	IDA	Function
GO:0004445	inositol-polyphosphate 5-phosphatase activity	-	ISO	Function
GO:0005737	cytoplasm	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005881	cytoplasmic microtubule	-	ISO	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0007420	brain development	21873635.	IBA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016787	hydrolase activity	-	IEA	Function
GO:0017124	SH3 domain binding	21873635.	IBA	Function
GO:0017124	SH3 domain binding	-	ISO	Function
GO:0030165	PDZ domain binding	21873635.	IBA	Function
GO:0031315	extrinsic component of mitochondrial outer membrane	-	ISO	Component
GO:0032587	ruffle membrane	-	ISO	Component
GO:0034595	phosphatidylinositol phosphate 5-phosphatase activity	-	IEA	Function
GO:0042578	phosphoric ester hydrolase activity	-	IEA	Function
GO:0042995	cell projection	-	IEA	Component
GO:0043679	axon terminus	-	ISO	Component
GO:0046855	inositol phosphate dephosphorylation	21873635.	IBA	Process
GO:0046855	inositol phosphate dephosphorylation	-	ISO	Process
GO:0046856	phosphatidylinositol dephosphorylation	21873635.	IBA	Process
GO:0046856	phosphatidylinositol dephosphorylation	-	ISO	Process
GO:0048312	intracellular distribution of mitochondria	-	ISO	Process
GO:0048471	perinuclear region of cytoplasm	21873635.	IBA	Component
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0052744	phosphatidylinositol monophosphate phosphatase activity	-	ISO	Function
GO:0098793	presynapse	21873635.	IBA	Component
GO:0098793	presynapse	-	ISO	Component