EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000023902 (Gene tree)
Gene ID: 332221
Gene Symbol: Zscan10
Alias: Zfp206|Zscan10
Full Name: zinc finger and SCAN domain containing 10
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 10164 bases
Position: chr17:23600856-23611019
Accession: 3040700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000111171	zf-C2H2	PF00096.26	5.7e-68	1	12
ENSMUSP00000111171	zf-C2H2	PF00096.26	5.7e-68	2	12
ENSMUSP00000111171	zf-C2H2	PF00096.26	5.7e-68	3	12
ENSMUSP00000111171	zf-C2H2	PF00096.26	5.7e-68	4	12
ENSMUSP00000111171	zf-C2H2	PF00096.26	5.7e-68	5	12
ENSMUSP00000111171	zf-C2H2	PF00096.26	5.7e-68	6	12
ENSMUSP00000111171	zf-C2H2	PF00096.26	5.7e-68	7	12
ENSMUSP00000111171	zf-C2H2	PF00096.26	5.7e-68	8	12
ENSMUSP00000111171	zf-C2H2	PF00096.26	5.7e-68	9	12
ENSMUSP00000111171	zf-C2H2	PF00096.26	5.7e-68	10	12
ENSMUSP00000111171	zf-C2H2	PF00096.26	5.7e-68	11	12
ENSMUSP00000111171	zf-C2H2	PF00096.26	5.7e-68	12	12
ENSMUSP00000093255	zf-C2H2	PF00096.26	6.5e-67	1	12
ENSMUSP00000093255	zf-C2H2	PF00096.26	6.5e-67	2	12
ENSMUSP00000093255	zf-C2H2	PF00096.26	6.5e-67	3	12
ENSMUSP00000093255	zf-C2H2	PF00096.26	6.5e-67	4	12
ENSMUSP00000093255	zf-C2H2	PF00096.26	6.5e-67	5	12
ENSMUSP00000093255	zf-C2H2	PF00096.26	6.5e-67	6	12
ENSMUSP00000093255	zf-C2H2	PF00096.26	6.5e-67	7	12
ENSMUSP00000093255	zf-C2H2	PF00096.26	6.5e-67	8	12
ENSMUSP00000093255	zf-C2H2	PF00096.26	6.5e-67	9	12
ENSMUSP00000093255	zf-C2H2	PF00096.26	6.5e-67	10	12
ENSMUSP00000093255	zf-C2H2	PF00096.26	6.5e-67	11	12
ENSMUSP00000093255	zf-C2H2	PF00096.26	6.5e-67	12	12
ENSMUSP00000118987	zf-C2H2	PF00096.26	6.2e-66	1	12
ENSMUSP00000118987	zf-C2H2	PF00096.26	6.2e-66	2	12
ENSMUSP00000118987	zf-C2H2	PF00096.26	6.2e-66	3	12
ENSMUSP00000118987	zf-C2H2	PF00096.26	6.2e-66	4	12
ENSMUSP00000118987	zf-C2H2	PF00096.26	6.2e-66	5	12
ENSMUSP00000118987	zf-C2H2	PF00096.26	6.2e-66	6	12
ENSMUSP00000118987	zf-C2H2	PF00096.26	6.2e-66	7	12
ENSMUSP00000118987	zf-C2H2	PF00096.26	6.2e-66	8	12
ENSMUSP00000118987	zf-C2H2	PF00096.26	6.2e-66	9	12
ENSMUSP00000118987	zf-C2H2	PF00096.26	6.2e-66	10	12
ENSMUSP00000118987	zf-C2H2	PF00096.26	6.2e-66	11	12
ENSMUSP00000118987	zf-C2H2	PF00096.26	6.2e-66	12	12
ENSMUSP00000120876	zf-C2H2	PF00096.26	2.6e-64	1	12
ENSMUSP00000120876	zf-C2H2	PF00096.26	2.6e-64	2	12
ENSMUSP00000120876	zf-C2H2	PF00096.26	2.6e-64	3	12
ENSMUSP00000120876	zf-C2H2	PF00096.26	2.6e-64	4	12
ENSMUSP00000120876	zf-C2H2	PF00096.26	2.6e-64	5	12
ENSMUSP00000120876	zf-C2H2	PF00096.26	2.6e-64	6	12
ENSMUSP00000120876	zf-C2H2	PF00096.26	2.6e-64	7	12
ENSMUSP00000120876	zf-C2H2	PF00096.26	2.6e-64	8	12
ENSMUSP00000120876	zf-C2H2	PF00096.26	2.6e-64	9	12
ENSMUSP00000120876	zf-C2H2	PF00096.26	2.6e-64	10	12
ENSMUSP00000120876	zf-C2H2	PF00096.26	2.6e-64	11	12
ENSMUSP00000120876	zf-C2H2	PF00096.26	2.6e-64	12	12
ENSMUSP00000113386	zf-C2H2	PF00096.26	6.9e-64	1	12
ENSMUSP00000113386	zf-C2H2	PF00096.26	6.9e-64	2	12
ENSMUSP00000113386	zf-C2H2	PF00096.26	6.9e-64	3	12
ENSMUSP00000113386	zf-C2H2	PF00096.26	6.9e-64	4	12
ENSMUSP00000113386	zf-C2H2	PF00096.26	6.9e-64	5	12
ENSMUSP00000113386	zf-C2H2	PF00096.26	6.9e-64	6	12
ENSMUSP00000113386	zf-C2H2	PF00096.26	6.9e-64	7	12
ENSMUSP00000113386	zf-C2H2	PF00096.26	6.9e-64	8	12
ENSMUSP00000113386	zf-C2H2	PF00096.26	6.9e-64	9	12
ENSMUSP00000113386	zf-C2H2	PF00096.26	6.9e-64	10	12
ENSMUSP00000113386	zf-C2H2	PF00096.26	6.9e-64	11	12
ENSMUSP00000113386	zf-C2H2	PF00096.26	6.9e-64	12	12
ENSMUSP00000116748	zf-C2H2	PF00096.26	2.1e-08	1	2
ENSMUSP00000116748	zf-C2H2	PF00096.26	2.1e-08	2	2
ENSMUSP00000118987	zf-met	PF12874.7	4.8e-07	1	1
ENSMUSP00000120876	zf-met	PF12874.7	1.4e-05	1	1
ENSMUSP00000113386	zf-met	PF12874.7	2.9e-05	1	1
ENSMUSP00000111171	zf-met	PF12874.7	0.0002	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000117606	-	891	-	ENSMUSP00000112460	149 (aa)	-	D3YWR9
ENSMUST00000115509	-	2368	-	ENSMUSP00000111171	672 (aa)	-	Q3URR7
ENSMUST00000122285	-	909	-	ENSMUSP00000112559	190 (aa)	-	E9PX93
ENSMUST00000123866	-	1074	-	ENSMUSP00000116748	329 (aa)	-	D3Z3Z6
ENSMUST00000095595	-	2698	-	ENSMUSP00000093255	782 (aa)	-	Q3URR7
ENSMUST00000125912	-	531	-	-	- (aa)	-	-
ENSMUST00000120967	-	2609	XM_017317515	ENSMUSP00000113386	750 (aa)	XP_017173004	Q3URR7
ENSMUST00000148062	-	2271	-	ENSMUSP00000120876	702 (aa)	-	E9PXB1
ENSMUST00000138487	-	844	-	ENSMUSP00000114341	262 (aa)	-	D3YVM1
ENSMUST00000129227	-	1902	-	ENSMUSP00000118987	543 (aa)	-	E9PV84
ENSMUST00000133749	-	548	-	-	- (aa)	-	-
ENSMUST00000118369	-	1006	-	ENSMUSP00000113757	190 (aa)	-	E9PX93

Gene Model

Click here to download ENSMUSG00000023902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000023902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000023902	Zscan10	79	41.214	ENSMUSG00000020364	Zfp354a	80	41.214
ENSMUSG00000023902	Zscan10	75	36.705	ENSMUSG00000052751	Repin1	92	36.705
ENSMUSG00000023902	Zscan10	78	37.313	ENSMUSG00000059142	Zfp945	75	35.971
ENSMUSG00000023902	Zscan10	80	42.342	ENSMUSG00000091474	2610021A01Rik	64	42.342
ENSMUSG00000023902	Zscan10	94	36.854	ENSMUSG00000114923	Gm49345	89	36.947
ENSMUSG00000023902	Zscan10	78	37.010	ENSMUSG00000095432	Zfp748	92	37.010
ENSMUSG00000023902	Zscan10	75	35.101	ENSMUSG00000057551	Zfp317	82	35.356
ENSMUSG00000023902	Zscan10	86	35.938	ENSMUSG00000070709	Zfp974	90	37.591
ENSMUSG00000023902	Zscan10	78	38.060	ENSMUSG00000023892	Zfp51	81	39.617
ENSMUSG00000023902	Zscan10	90	36.161	ENSMUSG00000012640	Zfp715	68	36.667
ENSMUSG00000023902	Zscan10	78	43.165	ENSMUSG00000006215	Zbtb17	72	34.627
ENSMUSG00000023902	Zscan10	79	47.009	ENSMUSG00000047603	Zfp235	61	41.880
ENSMUSG00000023902	Zscan10	77	39.416	ENSMUSG00000055305	Zfp93	68	39.416
ENSMUSG00000023902	Zscan10	78	40.179	ENSMUSG00000058402	Zfp420	97	40.991
ENSMUSG00000023902	Zscan10	74	37.631	ENSMUSG00000049755	Zfp672	92	39.437
ENSMUSG00000023902	Zscan10	78	40.394	ENSMUSG00000030823	9130019O22Rik	68	40.394
ENSMUSG00000023902	Zscan10	95	32.628	ENSMUSG00000054931	Zkscan4	95	39.869
ENSMUSG00000023902	Zscan10	79	39.255	ENSMUSG00000063108	Zfp26	78	39.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000023902	Zscan10	100	99.554	MGP_SPRETEiJ_G0022057	Zscan10	100	99.554	Mus_spretus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0003700	DNA-binding transcription factor activity	19740739.	IMP	Function
GO:0003700	DNA-binding transcription factor activity	16971461.17628018.	TAS	Function
GO:0005515	protein binding	19740739.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	16971461.17628018.	IDA	Component
GO:0043565	sequence-specific DNA binding	19740739.	IDA	Function
GO:0045892	negative regulation of transcription, DNA-templated	19740739.	IMP	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0048863	stem cell differentiation	16971461.17628018.	TAS	Process