EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000023932 (Gene tree)
Gene ID
71702
Gene Symbol
Cdc5l
Alias
1200002I02Rik|PCDC5RP
Full Name
cell division cycle 5-like (S. pombe)
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
41854 bases
Position
chr17:45391884-45433737
Accession
1918952
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000024727Myb_CefPF11831.89.4e-8211
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseRBDmap & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000024727-3027-ENSMUSP00000024727802 (aa)-Q6A068
ENSMUST00000232900-764--- (aa)--
ENSMUST00000232910-418--- (aa)--
Gene Model
Click here to download ENSMUSG00000023932's gene model file
Pathways
Pathway IDPathway NameSource
mmu03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000023932's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000023932Cdc5l10098.005ENSMUSG00000112027Gm904510098.005
ENSMUSG00000023932Cdc5l10097.880ENSMUSG00000112814Gm904010097.880
ENSMUSG00000023932Cdc5l10097.880ENSMUSG00000112252Gm3280210097.880
ENSMUSG00000023932Cdc5l10097.756ENSMUSG00000112495Gm904810097.756
ENSMUSG00000023932Cdc5l10097.631ENSMUSG00000112781Gm904610097.631
ENSMUSG00000023932Cdc5l10098.005ENSMUSG00000112919Gm904910098.005
ENSMUSG00000023932Cdc5l10097.880ENSMUSG00000112216Gm3271710097.880
ENSMUSG00000023932Cdc5l10097.880ENSMUSG00000112419Gm904410097.880
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000023932Cdc5l10098.005ENSG00000096401CDC5L10098.005Homo_sapiens
ENSMUSG00000023932Cdc5l9977.874ENSAPOG00000009828cdc5l9977.874Acanthochromis_polyacanthus
ENSMUSG00000023932Cdc5l10097.385ENSAMEG00000011685CDC5L10097.385Ailuropoda_melanoleuca
ENSMUSG00000023932Cdc5l9977.750ENSAOCG00000000762cdc5l9977.750Amphiprion_ocellaris
ENSMUSG00000023932Cdc5l9977.750ENSAPEG00000014728cdc5l9977.750Amphiprion_percula
ENSMUSG00000023932Cdc5l9977.256ENSATEG00000016760cdc5l9977.256Anabas_testudineus
ENSMUSG00000023932Cdc5l9990.411ENSAPLG00000015586CDC5L10090.411Anas_platyrhynchos
ENSMUSG00000023932Cdc5l10090.535ENSACAG00000012874CDC5L10090.535Anolis_carolinensis
ENSMUSG00000023932Cdc5l10097.756ENSANAG00000028499CDC5L10097.756Aotus_nancymaae
ENSMUSG00000023932Cdc5l9974.536ENSACLG00000027113cdc5l9974.536Astatotilapia_calliptera
ENSMUSG00000023932Cdc5l9782.839ENSAMXG00000000894cdc5l9982.581Astyanax_mexicanus
ENSMUSG00000023932Cdc5l10097.631ENSBTAG00000020012CDC5L10097.631Bos_taurus
ENSMUSG00000023932Cdc5l9947.531WBGene00008386cdc-5L9747.531Caenorhabditis_elegans
ENSMUSG00000023932Cdc5l10097.756ENSCJAG00000012210CDC5L10097.756Callithrix_jacchus
ENSMUSG00000023932Cdc5l10097.506ENSCAFG00000001996CDC5L10097.506Canis_familiaris
ENSMUSG00000023932Cdc5l10097.506ENSCAFG00020012353CDC5L10097.506Canis_lupus_dingo
ENSMUSG00000023932Cdc5l10097.631ENSCHIG00000022031CDC5L10097.631Capra_hircus
ENSMUSG00000023932Cdc5l10097.506ENSTSYG00000013155CDC5L10097.506Carlito_syrichta
ENSMUSG00000023932Cdc5l9882.211ENSCAPG00000016503CDC5L10082.465Cavia_aperea
ENSMUSG00000023932Cdc5l10097.631ENSCPOG00000000961CDC5L10097.631Cavia_porcellus
ENSMUSG00000023932Cdc5l10097.880ENSCCAG00000032324CDC5L10097.880Cebus_capucinus
ENSMUSG00000023932Cdc5l10098.130ENSCATG00000038925CDC5L10098.130Cercocebus_atys
ENSMUSG00000023932Cdc5l10097.756ENSCLAG00000014884CDC5L10097.756Chinchilla_lanigera
ENSMUSG00000023932Cdc5l10098.005ENSCSAG00000012464CDC5L10098.005Chlorocebus_sabaeus
ENSMUSG00000023932Cdc5l10077.307ENSCHOG00000001728CDC5L10077.307Choloepus_hoffmanni
ENSMUSG00000023932Cdc5l10093.275ENSCPBG00000016346CDC5L10093.275Chrysemys_picta_bellii
ENSMUSG00000023932Cdc5l9961.673ENSCING00000007995-9961.798Ciona_intestinalis
ENSMUSG00000023932Cdc5l9961.887ENSCSAVG00000010518-9961.887Ciona_savignyi
ENSMUSG00000023932Cdc5l10098.005ENSCANG00000032340CDC5L10098.005Colobus_angolensis_palliatus
ENSMUSG00000023932Cdc5l10069.738ENSCGRG00001021667-10069.738Cricetulus_griseus_chok1gshd
ENSMUSG00000023932Cdc5l9198.039ENSCGRG00001019419-10098.039Cricetulus_griseus_chok1gshd
ENSMUSG00000023932Cdc5l10077.182ENSCGRG00001007741-10077.182Cricetulus_griseus_chok1gshd
ENSMUSG00000023932Cdc5l9897.967ENSCGRG00000006762-10097.967Cricetulus_griseus_crigri
ENSMUSG00000023932Cdc5l9975.062ENSCSEG00000017309cdc5l9975.062Cynoglossus_semilaevis
ENSMUSG00000023932Cdc5l8294.595ENSCVAG00000014810cdc5l9395.890Cyprinodon_variegatus
ENSMUSG00000023932Cdc5l10083.541ENSDARG00000043797cdc5l10083.541Danio_rerio
ENSMUSG00000023932Cdc5l9991.056ENSDNOG00000044224CDC5L9891.180Dasypus_novemcinctus
ENSMUSG00000023932Cdc5l10098.005ENSDORG00000009131-10098.005Dipodomys_ordii
ENSMUSG00000023932Cdc5l10062.822FBgn0265574Cdc59862.822Drosophila_melanogaster
ENSMUSG00000023932Cdc5l8797.132ENSETEG00000013241CDC5L8797.132Echinops_telfairi
ENSMUSG00000023932Cdc5l8167.791ENSEBUG00000016336cdc5l9967.791Eptatretus_burgeri
ENSMUSG00000023932Cdc5l10097.506ENSEASG00005003742CDC5L10097.506Equus_asinus_asinus
ENSMUSG00000023932Cdc5l10097.506ENSECAG00000010081CDC5L10097.506Equus_caballus
ENSMUSG00000023932Cdc5l9182.496ENSEEUG00000007288CDC5L9182.496Erinaceus_europaeus
ENSMUSG00000023932Cdc5l10077.805ENSELUG00000013492cdc5l10077.805Esox_lucius
ENSMUSG00000023932Cdc5l10097.506ENSFCAG00000009570CDC5L10097.506Felis_catus
ENSMUSG00000023932Cdc5l10091.158ENSFALG00000012688CDC5L10091.158Ficedula_albicollis
ENSMUSG00000023932Cdc5l10097.007ENSFDAG00000018610CDC5L10097.007Fukomys_damarensis
ENSMUSG00000023932Cdc5l9977.295ENSFHEG00000013091cdc5l9977.295Fundulus_heteroclitus
ENSMUSG00000023932Cdc5l9975.185ENSGMOG00000000407cdc5l9975.185Gadus_morhua
ENSMUSG00000023932Cdc5l10091.283ENSGALG00000016704CDC5L9091.294Gallus_gallus
ENSMUSG00000023932Cdc5l6582.798ENSGAFG00000003610cdc5l9482.798Gambusia_affinis
ENSMUSG00000023932Cdc5l9976.020ENSGACG00000011733cdc5l9976.020Gasterosteus_aculeatus
ENSMUSG00000023932Cdc5l10093.026ENSGAGG00000005724CDC5L10093.026Gopherus_agassizii
ENSMUSG00000023932Cdc5l10098.005ENSGGOG00000006784CDC5L10098.005Gorilla_gorilla
ENSMUSG00000023932Cdc5l8098.214ENSHBUG00000017304cdc5l9995.082Haplochromis_burtoni
ENSMUSG00000023932Cdc5l10097.257ENSHGLG00000011993CDC5L10097.257Heterocephalus_glaber_female
ENSMUSG00000023932Cdc5l10097.257ENSHGLG00100005766CDC5L10097.257Heterocephalus_glaber_male
ENSMUSG00000023932Cdc5l9973.482ENSHCOG00000020596cdc5l9973.606Hippocampus_comes
ENSMUSG00000023932Cdc5l9984.461ENSIPUG00000004377cdc5l9984.461Ictalurus_punctatus
ENSMUSG00000023932Cdc5l10097.756ENSSTOG00000016173CDC5L10097.756Ictidomys_tridecemlineatus
ENSMUSG00000023932Cdc5l10097.880ENSJJAG00000012361-10097.880Jaculus_jaculus
ENSMUSG00000023932Cdc5l9977.819ENSKMAG00000007868cdc5l9977.819Kryptolebias_marmoratus
ENSMUSG00000023932Cdc5l9975.525ENSLBEG00000019437cdc5l9975.525Labrus_bergylta
ENSMUSG00000023932Cdc5l10085.679ENSLACG00000008060CDC5L10085.679Latimeria_chalumnae
ENSMUSG00000023932Cdc5l10085.679ENSLOCG00000015811cdc5l10085.679Lepisosteus_oculatus
ENSMUSG00000023932Cdc5l10096.758ENSLAFG00000012689CDC5L10096.758Loxodonta_africana
ENSMUSG00000023932Cdc5l10098.005ENSMFAG00000000812CDC5L10098.005Macaca_fascicularis
ENSMUSG00000023932Cdc5l10098.005ENSMMUG00000014389CDC5L10098.005Macaca_mulatta
ENSMUSG00000023932Cdc5l10098.005ENSMNEG00000036577CDC5L10098.005Macaca_nemestrina
ENSMUSG00000023932Cdc5l10098.005ENSMLEG00000030582CDC5L10098.005Mandrillus_leucophaeus
ENSMUSG00000023932Cdc5l9977.627ENSMAMG00000022399cdc5l9977.627Mastacembelus_armatus
ENSMUSG00000023932Cdc5l9976.885ENSMZEG00005027301cdc5l9976.885Maylandia_zebra
ENSMUSG00000023932Cdc5l10090.943ENSMGAG00000014263CDC5L10090.954Meleagris_gallopavo
ENSMUSG00000023932Cdc5l10098.753ENSMAUG00000013120-10098.753Mesocricetus_auratus
ENSMUSG00000023932Cdc5l10096.883ENSMICG00000006933CDC5L10096.883Microcebus_murinus
ENSMUSG00000023932Cdc5l10098.878ENSMOCG00000022910-10098.878Microtus_ochrogaster
ENSMUSG00000023932Cdc5l9267.463ENSMMOG00000006817cdc5l9964.074Mola_mola
ENSMUSG00000023932Cdc5l10094.521ENSMODG00000018923-10094.521Monodelphis_domestica
ENSMUSG00000023932Cdc5l9981.179ENSMODG00000003702-9981.179Monodelphis_domestica
ENSMUSG00000023932Cdc5l9981.556ENSMODG00000003716-9981.556Monodelphis_domestica
ENSMUSG00000023932Cdc5l9976.267ENSMALG00000021999cdc5l9976.267Monopterus_albus
ENSMUSG00000023932Cdc5l10099.626MGP_CAROLIEiJ_G0021641-10099.626Mus_caroli
ENSMUSG00000023932Cdc5l10099.751MGP_PahariEiJ_G0020633-10099.751Mus_pahari
ENSMUSG00000023932Cdc5l100100.000MGP_SPRETEiJ_G0022553-100100.000Mus_spretus
ENSMUSG00000023932Cdc5l10097.382ENSMPUG00000012546CDC5L10097.382Mustela_putorius_furo
ENSMUSG00000023932Cdc5l10097.011ENSMLUG00000012803CDC5L10097.011Myotis_lucifugus
ENSMUSG00000023932Cdc5l10098.379ENSNGAG00000015764-10098.379Nannospalax_galili
ENSMUSG00000023932Cdc5l8791.720ENSNBRG00000009082cdc5l9591.720Neolamprologus_brichardi
ENSMUSG00000023932Cdc5l9695.562ENSNLEG00000003627CDC5L10095.562Nomascus_leucogenys
ENSMUSG00000023932Cdc5l7993.836ENSMEUG00000012298-7993.836Notamacropus_eugenii
ENSMUSG00000023932Cdc5l8776.361ENSMEUG00000015564-10076.361Notamacropus_eugenii
ENSMUSG00000023932Cdc5l9188.235ENSOPRG00000007745CDC5L9188.235Ochotona_princeps
ENSMUSG00000023932Cdc5l10097.880ENSODEG00000017235CDC5L10097.880Octodon_degus
ENSMUSG00000023932Cdc5l9976.885ENSONIG00000001420cdc5l9976.885Oreochromis_niloticus
ENSMUSG00000023932Cdc5l10093.773ENSOANG00000008262CDC5L10093.773Ornithorhynchus_anatinus
ENSMUSG00000023932Cdc5l10098.005ENSOCUG00000017240CDC5L10098.005Oryctolagus_cuniculus
ENSMUSG00000023932Cdc5l9976.638ENSORLG00000018576cdc5l9976.638Oryzias_latipes
ENSMUSG00000023932Cdc5l9977.132ENSOMEG00000015638cdc5l9977.132Oryzias_melastigma
ENSMUSG00000023932Cdc5l10097.136ENSOGAG00000008211CDC5L10097.136Otolemur_garnettii
ENSMUSG00000023932Cdc5l10097.631ENSOARG00000010205CDC5L10097.631Ovis_aries
ENSMUSG00000023932Cdc5l10097.880ENSPPAG00000031456CDC5L10097.880Pan_paniscus
ENSMUSG00000023932Cdc5l10097.506ENSPPRG00000014475CDC5L10097.506Panthera_pardus
ENSMUSG00000023932Cdc5l10097.382ENSPTIG00000006547CDC5L10097.382Panthera_tigris_altaica
ENSMUSG00000023932Cdc5l10097.880ENSPTRG00000018224CDC5L10097.880Pan_troglodytes
ENSMUSG00000023932Cdc5l10098.005ENSPANG00000018654CDC5L10098.005Papio_anubis
ENSMUSG00000023932Cdc5l10083.064ENSPKIG00000015398cdc5l10083.064Paramormyrops_kingsleyae
ENSMUSG00000023932Cdc5l10092.030ENSPSIG00000013123CDC5L10092.030Pelodiscus_sinensis
ENSMUSG00000023932Cdc5l10082.192ENSPEMG00000007860-10082.192Peromyscus_maniculatus_bairdii
ENSMUSG00000023932Cdc5l9976.196ENSPMAG00000005250cdc5l9976.196Petromyzon_marinus
ENSMUSG00000023932Cdc5l10094.396ENSPCIG00000024040-10094.396Phascolarctos_cinereus
ENSMUSG00000023932Cdc5l9976.923ENSPFOG00000013630cdc5l9976.923Poecilia_formosa
ENSMUSG00000023932Cdc5l9977.047ENSPLAG00000001970cdc5l9977.047Poecilia_latipinna
ENSMUSG00000023932Cdc5l9977.295ENSPMEG00000001452cdc5l9977.295Poecilia_mexicana
ENSMUSG00000023932Cdc5l9977.627ENSPREG00000004453cdc5l9977.627Poecilia_reticulata
ENSMUSG00000023932Cdc5l10097.880ENSPPYG00000016661CDC5L10097.880Pongo_abelii
ENSMUSG00000023932Cdc5l8787.518ENSPCAG00000011444CDC5L10087.518Procavia_capensis
ENSMUSG00000023932Cdc5l6979.455ENSPCOG00000024619CDC5L7179.455Propithecus_coquereli
ENSMUSG00000023932Cdc5l10097.506ENSPVAG00000004579CDC5L10097.506Pteropus_vampyrus
ENSMUSG00000023932Cdc5l9984.085ENSPNAG00000006467cdc5l9984.085Pygocentrus_nattereri
ENSMUSG00000023932Cdc5l10099.626ENSRNOG00000019975Cdc5l10099.626Rattus_norvegicus
ENSMUSG00000023932Cdc5l10091.283ENSRBIG00000037455CDC5L10091.283Rhinopithecus_bieti
ENSMUSG00000023932Cdc5l10098.005ENSRROG00000029176CDC5L10098.005Rhinopithecus_roxellana
ENSMUSG00000023932Cdc5l10097.880ENSSBOG00000031265CDC5L10097.880Saimiri_boliviensis_boliviensis
ENSMUSG00000023932Cdc5l10094.286ENSSHAG00000017642-10094.286Sarcophilus_harrisii
ENSMUSG00000023932Cdc5l10082.690ENSSFOG00015015844cdc5l10082.690Scleropages_formosus
ENSMUSG00000023932Cdc5l9976.514ENSSMAG00000001917cdc5l9976.514Scophthalmus_maximus
ENSMUSG00000023932Cdc5l9977.256ENSSDUG00000014563cdc5l9977.256Seriola_dumerili
ENSMUSG00000023932Cdc5l9977.256ENSSLDG00000017777cdc5l9977.256Seriola_lalandi_dorsalis
ENSMUSG00000023932Cdc5l8997.801ENSSARG00000012371CDC5L9197.801Sorex_araneus
ENSMUSG00000023932Cdc5l10091.283ENSSPUG00000006685CDC5L10091.283Sphenodon_punctatus
ENSMUSG00000023932Cdc5l9977.750ENSSPAG00000023162cdc5l9977.750Stegastes_partitus
ENSMUSG00000023932Cdc5l10097.382ENSSSCG00000001708CDC5L10097.382Sus_scrofa
ENSMUSG00000023932Cdc5l10090.582ENSTGUG00000013251CDC5L10090.582Taeniopygia_guttata
ENSMUSG00000023932Cdc5l9975.493ENSTRUG00000006648cdc5l9975.493Takifugu_rubripes
ENSMUSG00000023932Cdc5l9975.248ENSTNIG00000009853cdc5l9975.248Tetraodon_nigroviridis
ENSMUSG00000023932Cdc5l8198.718ENSTBEG00000017422CDC5L8198.718Tupaia_belangeri
ENSMUSG00000023932Cdc5l10097.382ENSTTRG00000006940CDC5L10097.382Tursiops_truncatus
ENSMUSG00000023932Cdc5l6895.588ENSUAMG00000028303CDC5L10095.588Ursus_americanus
ENSMUSG00000023932Cdc5l10097.506ENSUMAG00000005223CDC5L10097.506Ursus_maritimus
ENSMUSG00000023932Cdc5l9897.332ENSVPAG00000008981CDC5L10097.332Vicugna_pacos
ENSMUSG00000023932Cdc5l10097.506ENSVVUG00000029242CDC5L10097.506Vulpes_vulpes
ENSMUSG00000023932Cdc5l9976.449ENSXETG00000007885cdc5l9976.449Xenopus_tropicalis
ENSMUSG00000023932Cdc5l9977.295ENSXCOG00000014117cdc5l9977.295Xiphophorus_couchianus
ENSMUSG00000023932Cdc5l9977.295ENSXMAG00000006816cdc5l9977.295Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000278mitotic cell cycle-ISOProcess
GO:0000398mRNA splicing, via spliceosome-ISOProcess
GO:0000974Prp19 complex-ISOComponent
GO:0000977RNA polymerase II regulatory region sequence-specific DNA binding-ISOFunction
GO:0001222transcription corepressor binding-ISOFunction
GO:0001228DNA-binding transcription activator activity, RNA polymerase II-specific-ISOFunction
GO:0003677DNA binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0005634nucleus-ISOComponent
GO:0005654nucleoplasm-ISOComponent
GO:0005662DNA replication factor A complex-ISOComponent
GO:0005681spliceosomal complex-IEAComponent
GO:0005737cytoplasm-ISOComponent
GO:0006281DNA repair-IEAProcess
GO:0006397mRNA processing-IEAProcess
GO:0006974cellular response to DNA damage stimulus-IEAProcess
GO:0007049cell cycle-IEAProcess
GO:0008157protein phosphatase 1 binding-ISOFunction
GO:0008380RNA splicing-IEAProcess
GO:0016607nuclear speck-ISOComponent
GO:0019901protein kinase binding-ISOFunction
GO:0032993protein-DNA complex-ISOComponent
GO:0043522leucine zipper domain binding-ISOFunction
GO:0045944positive regulation of transcription by RNA polymerase II-ISOProcess
GO:0048471perinuclear region of cytoplasm-ISOComponent
GO:0071007U2-type catalytic step 2 spliceosome-ISOComponent
GO:0071013catalytic step 2 spliceosome-ISOComponent
GO:0071987WD40-repeat domain binding-ISOFunction
GO:0072422signal transduction involved in DNA damage checkpoint-ISOProcess
GO:1904568cellular response to wortmannin-ISOProcess
GO:1990090cellular response to nerve growth factor stimulus-ISOProcess

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