EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000023967 (Gene tree)
Gene ID: 68565
Gene Symbol: Mrps18a
Alias: 1110004O20Rik
Full Name: mitochondrial ribosomal protein S18A
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 17925 bases
Position: chr17:46110986-46128910
Accession: 1915815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000122433	Ribosomal_S18	PF01084.20	5.3e-16	1	1
ENSMUSP00000024763	Ribosomal_S18	PF01084.20	7.4e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000024763	-	884	-	ENSMUSP00000024763	196 (aa)	-	Q5U5I3
ENSMUST00000147672	-	2220	-	-	- (aa)	-	-
ENSMUST00000134237	-	903	-	-	- (aa)	-	-
ENSMUST00000131943	-	571	-	-	- (aa)	-	-
ENSMUST00000123646	-	621	-	ENSMUSP00000122433	149 (aa)	-	D3Z603
ENSMUST00000146255	-	544	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000023967's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000023967's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000023967	Mrps18a	87	31.618	ENSMUSG00000016833	Mrps18c	93	31.343

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000023967	Mrps18a	100	81.879	ENSG00000096080	MRPS18A	99	82.540	Homo_sapiens
ENSMUSG00000023967	Mrps18a	100	79.082	ENSAMEG00000012117	MRPS18A	100	79.082	Ailuropoda_melanoleuca
ENSMUSG00000023967	Mrps18a	86	64.118	ENSACIG00000017782	mrps18a	81	64.118	Amphilophus_citrinellus
ENSMUSG00000023967	Mrps18a	66	65.657	ENSAOCG00000005723	mrps18a	58	65.657	Amphiprion_ocellaris
ENSMUSG00000023967	Mrps18a	100	56.853	ENSAPEG00000006971	mrps18a	94	56.853	Amphiprion_percula
ENSMUSG00000023967	Mrps18a	86	65.680	ENSATEG00000003132	mrps18a	81	65.680	Anabas_testudineus
ENSMUSG00000023967	Mrps18a	81	71.698	ENSAPLG00000016280	MRPS18A	100	71.698	Anas_platyrhynchos
ENSMUSG00000023967	Mrps18a	100	67.114	ENSACAG00000000642	MRPS18A	100	63.776	Anolis_carolinensis
ENSMUSG00000023967	Mrps18a	100	80.102	ENSANAG00000030889	MRPS18A	100	80.102	Aotus_nancymaae
ENSMUSG00000023967	Mrps18a	100	58.376	ENSACLG00000008170	mrps18a	95	60.116	Astatotilapia_calliptera
ENSMUSG00000023967	Mrps18a	58	63.478	ENSAMXG00000036055	-	85	63.478	Astyanax_mexicanus
ENSMUSG00000023967	Mrps18a	86	62.308	ENSAMXG00000036348	mrps18a	84	57.627	Astyanax_mexicanus
ENSMUSG00000023967	Mrps18a	100	79.195	ENSBTAG00000025571	MRPS18A	100	79.082	Bos_taurus
ENSMUSG00000023967	Mrps18a	87	31.818	WBGene00022583	mrps-18A	70	31.818	Caenorhabditis_elegans
ENSMUSG00000023967	Mrps18a	100	79.592	ENSCJAG00000017382	MRPS18A	100	79.592	Callithrix_jacchus
ENSMUSG00000023967	Mrps18a	100	78.571	ENSCAFG00000001928	MRPS18A	100	78.571	Canis_familiaris
ENSMUSG00000023967	Mrps18a	100	78.061	ENSCAFG00020012064	MRPS18A	83	78.061	Canis_lupus_dingo
ENSMUSG00000023967	Mrps18a	100	79.866	ENSCHIG00000013039	MRPS18A	100	79.592	Capra_hircus
ENSMUSG00000023967	Mrps18a	100	80.102	ENSTSYG00000001390	MRPS18A	100	80.102	Carlito_syrichta
ENSMUSG00000023967	Mrps18a	76	85.135	ENSCAPG00000016029	MRPS18A	91	85.135	Cavia_aperea
ENSMUSG00000023967	Mrps18a	100	78.523	ENSCPOG00000022949	MRPS18A	96	81.383	Cavia_porcellus
ENSMUSG00000023967	Mrps18a	100	81.208	ENSCCAG00000021108	MRPS18A	100	80.612	Cebus_capucinus
ENSMUSG00000023967	Mrps18a	100	79.082	ENSCATG00000012963	MRPS18A	100	79.082	Cercocebus_atys
ENSMUSG00000023967	Mrps18a	100	78.571	ENSCLAG00000012929	MRPS18A	100	78.571	Chinchilla_lanigera
ENSMUSG00000023967	Mrps18a	100	79.082	ENSCSAG00000012127	MRPS18A	100	79.082	Chlorocebus_sabaeus
ENSMUSG00000023967	Mrps18a	100	65.772	ENSCPBG00000025243	MRPS18A	100	61.735	Chrysemys_picta_bellii
ENSMUSG00000023967	Mrps18a	84	36.471	ENSCING00000024771	-	84	36.471	Ciona_intestinalis
ENSMUSG00000023967	Mrps18a	87	36.641	ENSCSAVG00000009539	-	90	37.888	Ciona_savignyi
ENSMUSG00000023967	Mrps18a	100	79.195	ENSCANG00000039873	MRPS18A	100	78.571	Colobus_angolensis_palliatus
ENSMUSG00000023967	Mrps18a	89	87.218	ENSCGRG00001017882	Mrps18a	97	82.222	Cricetulus_griseus_chok1gshd
ENSMUSG00000023967	Mrps18a	100	64.430	ENSCGRG00000000079	Mrps18a	100	64.737	Cricetulus_griseus_crigri
ENSMUSG00000023967	Mrps18a	86	61.176	ENSCSEG00000019650	mrps18a	81	62.573	Cynoglossus_semilaevis
ENSMUSG00000023967	Mrps18a	84	65.663	ENSCVAG00000006511	mrps18a	79	65.663	Cyprinodon_variegatus
ENSMUSG00000023967	Mrps18a	85	62.500	ENSDARG00000024465	mrps18a	95	55.500	Danio_rerio
ENSMUSG00000023967	Mrps18a	100	79.866	ENSDNOG00000035755	MRPS18A	99	78.571	Dasypus_novemcinctus
ENSMUSG00000023967	Mrps18a	100	85.906	ENSDORG00000014583	Mrps18a	100	83.163	Dipodomys_ordii
ENSMUSG00000023967	Mrps18a	90	36.765	FBgn0051450	mRpS18A	83	36.765	Drosophila_melanogaster
ENSMUSG00000023967	Mrps18a	76	67.027	ENSETEG00000014171	MRPS18A	100	67.027	Echinops_telfairi
ENSMUSG00000023967	Mrps18a	100	79.195	ENSEASG00005003485	MRPS18A	63	80.233	Equus_asinus_asinus
ENSMUSG00000023967	Mrps18a	100	78.523	ENSECAG00000004870	MRPS18A	63	79.070	Equus_caballus
ENSMUSG00000023967	Mrps18a	93	60.109	ENSELUG00000005253	mrps18a	87	60.109	Esox_lucius
ENSMUSG00000023967	Mrps18a	100	78.571	ENSFCAG00000036031	MRPS18A	100	78.571	Felis_catus
ENSMUSG00000023967	Mrps18a	100	67.114	ENSFALG00000011356	MRPS18A	100	64.796	Ficedula_albicollis
ENSMUSG00000023967	Mrps18a	100	77.852	ENSFDAG00000012875	MRPS18A	87	78.035	Fukomys_damarensis
ENSMUSG00000023967	Mrps18a	82	65.432	ENSFHEG00000009014	mrps18a	77	65.432	Fundulus_heteroclitus
ENSMUSG00000023967	Mrps18a	100	51.634	ENSGMOG00000012493	mrps18a	97	53.500	Gadus_morhua
ENSMUSG00000023967	Mrps18a	97	69.444	ENSGALG00000010296	MRPS18A	97	69.444	Gallus_gallus
ENSMUSG00000023967	Mrps18a	83	68.293	ENSGAFG00000005211	mrps18a	88	64.242	Gambusia_affinis
ENSMUSG00000023967	Mrps18a	81	64.463	ENSGACG00000013370	mrps18a	82	60.714	Gasterosteus_aculeatus
ENSMUSG00000023967	Mrps18a	68	79.208	ENSGAGG00000017954	MRPS18A	79	68.919	Gopherus_agassizii
ENSMUSG00000023967	Mrps18a	100	80.537	ENSGGOG00000006303	-	100	80.102	Gorilla_gorilla
ENSMUSG00000023967	Mrps18a	100	58.376	ENSHBUG00000014682	mrps18a	94	58.376	Haplochromis_burtoni
ENSMUSG00000023967	Mrps18a	100	76.531	ENSHGLG00000014356	MRPS18A	100	76.531	Heterocephalus_glaber_female
ENSMUSG00000023967	Mrps18a	100	76.531	ENSHGLG00100010988	MRPS18A	100	76.531	Heterocephalus_glaber_male
ENSMUSG00000023967	Mrps18a	84	66.463	ENSHCOG00000000856	mrps18a	79	66.463	Hippocampus_comes
ENSMUSG00000023967	Mrps18a	91	62.431	ENSIPUG00000017406	mrps18a	87	62.983	Ictalurus_punctatus
ENSMUSG00000023967	Mrps18a	100	77.852	ENSSTOG00000004490	MRPS18A	100	75.728	Ictidomys_tridecemlineatus
ENSMUSG00000023967	Mrps18a	100	82.143	ENSJJAG00000006567	Mrps18a	100	82.143	Jaculus_jaculus
ENSMUSG00000023967	Mrps18a	86	64.118	ENSKMAG00000014910	mrps18a	81	64.118	Kryptolebias_marmoratus
ENSMUSG00000023967	Mrps18a	84	66.265	ENSLBEG00000003391	mrps18a	79	66.265	Labrus_bergylta
ENSMUSG00000023967	Mrps18a	91	47.222	ENSLACG00000022160	mrps18a	84	47.222	Latimeria_chalumnae
ENSMUSG00000023967	Mrps18a	91	68.382	ENSLOCG00000016008	mrps18a	87	63.934	Lepisosteus_oculatus
ENSMUSG00000023967	Mrps18a	100	77.157	ENSLAFG00000001168	MRPS18A	100	77.157	Loxodonta_africana
ENSMUSG00000023967	Mrps18a	100	79.082	ENSMFAG00000038311	MRPS18A	100	79.082	Macaca_fascicularis
ENSMUSG00000023967	Mrps18a	100	79.082	ENSMMUG00000014749	MRPS18A	100	79.082	Macaca_mulatta
ENSMUSG00000023967	Mrps18a	100	78.571	ENSMNEG00000044642	MRPS18A	100	78.571	Macaca_nemestrina
ENSMUSG00000023967	Mrps18a	81	82.911	ENSMLEG00000041828	MRPS18A	100	82.911	Mandrillus_leucophaeus
ENSMUSG00000023967	Mrps18a	86	62.353	ENSMAMG00000015478	mrps18a	81	64.706	Mastacembelus_armatus
ENSMUSG00000023967	Mrps18a	100	58.376	ENSMZEG00005014925	mrps18a	95	60.116	Maylandia_zebra
ENSMUSG00000023967	Mrps18a	97	69.444	ENSMGAG00000010915	MRPS18A	98	65.969	Meleagris_gallopavo
ENSMUSG00000023967	Mrps18a	100	78.061	ENSMICG00000005062	MRPS18A	100	78.061	Microcebus_murinus
ENSMUSG00000023967	Mrps18a	100	89.796	ENSMOCG00000021207	-	100	89.796	Microtus_ochrogaster
ENSMUSG00000023967	Mrps18a	100	82.653	ENSMOCG00000015168	-	100	82.653	Microtus_ochrogaster
ENSMUSG00000023967	Mrps18a	52	69.231	ENSMMOG00000015315	mrps18a	60	69.231	Mola_mola
ENSMUSG00000023967	Mrps18a	86	62.941	ENSMMOG00000015248	mrps18a	82	62.941	Mola_mola
ENSMUSG00000023967	Mrps18a	100	64.854	ENSMODG00000018952	MRPS18A	100	64.854	Monodelphis_domestica
ENSMUSG00000023967	Mrps18a	98	57.513	ENSMALG00000017044	mrps18a	98	57.513	Monopterus_albus
ENSMUSG00000023967	Mrps18a	100	99.490	MGP_CAROLIEiJ_G0021656	Mrps18a	100	99.490	Mus_caroli
ENSMUSG00000023967	Mrps18a	100	96.939	MGP_PahariEiJ_G0020648	Mrps18a	100	96.939	Mus_pahari
ENSMUSG00000023967	Mrps18a	100	100.000	MGP_SPRETEiJ_G0022568	Mrps18a	100	100.000	Mus_spretus
ENSMUSG00000023967	Mrps18a	100	79.082	ENSMPUG00000012868	MRPS18A	83	79.082	Mustela_putorius_furo
ENSMUSG00000023967	Mrps18a	100	80.537	ENSMLUG00000017755	MRPS18A	99	80.928	Myotis_lucifugus
ENSMUSG00000023967	Mrps18a	100	84.694	ENSNGAG00000020052	Mrps18a	100	84.694	Nannospalax_galili
ENSMUSG00000023967	Mrps18a	86	64.118	ENSNBRG00000021152	mrps18a	81	64.118	Neolamprologus_brichardi
ENSMUSG00000023967	Mrps18a	100	81.879	ENSNLEG00000003865	MRPS18A	99	82.540	Nomascus_leucogenys
ENSMUSG00000023967	Mrps18a	100	62.651	ENSMEUG00000013986	MRPS18A	100	62.249	Notamacropus_eugenii
ENSMUSG00000023967	Mrps18a	100	81.395	ENSOPRG00000007680	MRPS18A	100	59.533	Ochotona_princeps
ENSMUSG00000023967	Mrps18a	100	75.168	ENSODEG00000015388	MRPS18A	100	74.490	Octodon_degus
ENSMUSG00000023967	Mrps18a	86	64.706	ENSONIG00000000609	mrps18a	81	64.706	Oreochromis_niloticus
ENSMUSG00000023967	Mrps18a	79	81.935	ENSOANG00000001955	MRPS18A	97	81.935	Ornithorhynchus_anatinus
ENSMUSG00000023967	Mrps18a	100	81.879	ENSOCUG00000005544	MRPS18A	100	80.102	Oryctolagus_cuniculus
ENSMUSG00000023967	Mrps18a	86	63.529	ENSORLG00000023864	mrps18a	82	63.529	Oryzias_latipes
ENSMUSG00000023967	Mrps18a	86	64.118	ENSORLG00020002882	mrps18a	82	64.118	Oryzias_latipes_hni
ENSMUSG00000023967	Mrps18a	86	62.941	ENSORLG00015022065	mrps18a	82	62.941	Oryzias_latipes_hsok
ENSMUSG00000023967	Mrps18a	86	64.706	ENSOMEG00000018124	mrps18a	81	64.706	Oryzias_melastigma
ENSMUSG00000023967	Mrps18a	100	80.612	ENSOGAG00000026551	MRPS18A	100	80.612	Otolemur_garnettii
ENSMUSG00000023967	Mrps18a	100	79.866	ENSOARG00000008279	MRPS18A	100	79.592	Ovis_aries
ENSMUSG00000023967	Mrps18a	100	82.550	ENSPPAG00000036291	MRPS18A	99	83.333	Pan_paniscus
ENSMUSG00000023967	Mrps18a	100	79.195	ENSPPRG00000006429	MRPS18A	99	80.159	Panthera_pardus
ENSMUSG00000023967	Mrps18a	100	78.523	ENSPTIG00000001653	MRPS18A	99	79.365	Panthera_tigris_altaica
ENSMUSG00000023967	Mrps18a	100	82.550	ENSPTRG00000018209	MRPS18A	99	83.333	Pan_troglodytes
ENSMUSG00000023967	Mrps18a	100	79.082	ENSPANG00000006967	MRPS18A	100	79.082	Papio_anubis
ENSMUSG00000023967	Mrps18a	84	68.902	ENSPKIG00000012807	mrps18a	70	68.902	Paramormyrops_kingsleyae
ENSMUSG00000023967	Mrps18a	78	67.241	ENSPSIG00000013672	MRPS18A	85	61.350	Pelodiscus_sinensis
ENSMUSG00000023967	Mrps18a	65	69.466	ENSPMGG00000000493	mrps18a	76	67.333	Periophthalmus_magnuspinnatus
ENSMUSG00000023967	Mrps18a	100	91.275	ENSPEMG00000000405	Mrps18a	100	90.306	Peromyscus_maniculatus_bairdii
ENSMUSG00000023967	Mrps18a	84	64.848	ENSPMAG00000007012	mrps18a	90	64.848	Petromyzon_marinus
ENSMUSG00000023967	Mrps18a	100	78.523	ENSPCIG00000024858	MRPS18A	100	78.061	Phascolarctos_cinereus
ENSMUSG00000023967	Mrps18a	81	65.625	ENSPFOG00000009046	mrps18a	100	65.625	Poecilia_formosa
ENSMUSG00000023967	Mrps18a	85	64.286	ENSPLAG00000011106	mrps18a	80	64.286	Poecilia_latipinna
ENSMUSG00000023967	Mrps18a	85	64.286	ENSPMEG00000000736	mrps18a	82	66.443	Poecilia_mexicana
ENSMUSG00000023967	Mrps18a	84	66.265	ENSPREG00000012172	mrps18a	89	62.275	Poecilia_reticulata
ENSMUSG00000023967	Mrps18a	100	81.879	ENSPPYG00000017282	MRPS18A	100	80.612	Pongo_abelii
ENSMUSG00000023967	Mrps18a	80	63.902	ENSPCAG00000004192	MRPS18A	99	63.902	Procavia_capensis
ENSMUSG00000023967	Mrps18a	100	80.102	ENSPCOG00000014911	MRPS18A	100	80.102	Propithecus_coquereli
ENSMUSG00000023967	Mrps18a	100	80.800	ENSPVAG00000002758	MRPS18A	100	56.767	Pteropus_vampyrus
ENSMUSG00000023967	Mrps18a	100	58.376	ENSPNYG00000014753	mrps18a	94	58.376	Pundamilia_nyererei
ENSMUSG00000023967	Mrps18a	87	60.116	ENSPNAG00000023462	mrps18a	84	58.989	Pygocentrus_nattereri
ENSMUSG00000023967	Mrps18a	100	92.857	ENSRNOG00000019511	Mrps18a	100	92.857	Rattus_norvegicus
ENSMUSG00000023967	Mrps18a	100	80.537	ENSRBIG00000028789	MRPS18A	99	80.952	Rhinopithecus_bieti
ENSMUSG00000023967	Mrps18a	100	80.537	ENSRROG00000042368	-	99	80.952	Rhinopithecus_roxellana
ENSMUSG00000023967	Mrps18a	100	80.102	ENSSBOG00000019943	MRPS18A	100	80.102	Saimiri_boliviensis_boliviensis
ENSMUSG00000023967	Mrps18a	100	77.852	ENSSHAG00000015048	-	100	77.041	Sarcophilus_harrisii
ENSMUSG00000023967	Mrps18a	93	63.187	ENSSFOG00015005628	mrps18a	88	63.187	Scleropages_formosus
ENSMUSG00000023967	Mrps18a	84	66.265	ENSSMAG00000009353	mrps18a	80	66.265	Scophthalmus_maximus
ENSMUSG00000023967	Mrps18a	76	64.430	ENSSDUG00000011655	mrps18a	82	67.114	Seriola_dumerili
ENSMUSG00000023967	Mrps18a	69	69.343	ENSSLDG00000025435	mrps18a	73	69.343	Seriola_lalandi_dorsalis
ENSMUSG00000023967	Mrps18a	100	67.333	ENSSPUG00000011517	MRPS18A	100	65.482	Sphenodon_punctatus
ENSMUSG00000023967	Mrps18a	100	60.914	ENSSPAG00000000034	mrps18a	94	60.914	Stegastes_partitus
ENSMUSG00000023967	Mrps18a	100	78.061	ENSSSCG00000001692	MRPS18A	100	78.061	Sus_scrofa
ENSMUSG00000023967	Mrps18a	68	79.208	ENSTGUG00000008142	MRPS18A	100	70.946	Taeniopygia_guttata
ENSMUSG00000023967	Mrps18a	97	59.000	ENSTRUG00000025134	mrps18a	96	59.000	Takifugu_rubripes
ENSMUSG00000023967	Mrps18a	97	59.000	ENSTNIG00000016302	mrps18a	96	59.000	Tetraodon_nigroviridis
ENSMUSG00000023967	Mrps18a	100	72.308	ENSTBEG00000004094	MRPS18A	100	54.826	Tupaia_belangeri
ENSMUSG00000023967	Mrps18a	100	69.048	ENSTTRG00000006354	MRPS18A	100	45.353	Tursiops_truncatus
ENSMUSG00000023967	Mrps18a	100	79.082	ENSUAMG00000013758	MRPS18A	100	79.082	Ursus_americanus
ENSMUSG00000023967	Mrps18a	100	78.571	ENSUMAG00000005910	MRPS18A	100	78.571	Ursus_maritimus
ENSMUSG00000023967	Mrps18a	68	71.324	ENSVVUG00000022444	-	68	71.324	Vulpes_vulpes
ENSMUSG00000023967	Mrps18a	100	77.551	ENSVVUG00000029092	-	100	77.551	Vulpes_vulpes
ENSMUSG00000023967	Mrps18a	99	64.626	ENSXETG00000003270	mrps18a	95	65.333	Xenopus_tropicalis
ENSMUSG00000023967	Mrps18a	78	63.399	ENSXCOG00000007223	mrps18a	84	63.924	Xiphophorus_couchianus
ENSMUSG00000023967	Mrps18a	85	63.095	ENSXMAG00000004867	mrps18a	95	58.101	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11402041.	ISS	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005763	mitochondrial small ribosomal subunit	-	ISO	Component
GO:0005763	mitochondrial small ribosomal subunit	11402041.	ISS	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0032543	mitochondrial translation	11402041.	ISS	Process
GO:0070181	small ribosomal subunit rRNA binding	21873635.	IBA	Function