EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000023988 (Gene tree)
Gene ID: 53414
Gene Symbol: Bysl
Alias: Enp1
Full Name: bystin-like
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 12162 bases
Position: chr17:47599331-47611492
Accession: 1858419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000024783	Bystin	PF05291.11	8.7e-138	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000024783	-	3854	-	ENSMUSP00000024783	436 (aa)	-	O54825

Gene Model

Click here to download ENSMUSG00000023988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000023988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000023988	Bysl	100	90.618	ENSG00000112578	BYSL	97	93.820	Homo_sapiens
ENSMUSG00000023988	Bysl	100	73.589	ENSAPOG00000017917	bysl	98	73.913	Acanthochromis_polyacanthus
ENSMUSG00000023988	Bysl	100	91.076	ENSAMEG00000013033	BYSL	100	91.304	Ailuropoda_melanoleuca
ENSMUSG00000023988	Bysl	69	86.513	ENSACIG00000019537	bysl	99	86.513	Amphilophus_citrinellus
ENSMUSG00000023988	Bysl	96	75.943	ENSAOCG00000001625	bysl	98	74.201	Amphiprion_ocellaris
ENSMUSG00000023988	Bysl	96	75.943	ENSAPEG00000014739	bysl	98	74.201	Amphiprion_percula
ENSMUSG00000023988	Bysl	99	74.194	ENSATEG00000006316	bysl	98	74.424	Anabas_testudineus
ENSMUSG00000023988	Bysl	75	82.121	ENSAPLG00000008733	BYSL	98	82.121	Anas_platyrhynchos
ENSMUSG00000023988	Bysl	98	75.917	ENSACAG00000003079	BYSL	90	76.147	Anolis_carolinensis
ENSMUSG00000023988	Bysl	100	90.847	ENSANAG00000036138	BYSL	100	91.076	Aotus_nancymaae
ENSMUSG00000023988	Bysl	100	74.376	ENSACLG00000022434	bysl	99	74.376	Astatotilapia_calliptera
ENSMUSG00000023988	Bysl	99	72.336	ENSAMXG00000008799	bysl	99	72.562	Astyanax_mexicanus
ENSMUSG00000023988	Bysl	100	91.304	ENSBTAG00000010101	BYSL	100	91.304	Bos_taurus
ENSMUSG00000023988	Bysl	96	51.408	WBGene00000276	byn-1	93	50.939	Caenorhabditis_elegans
ENSMUSG00000023988	Bysl	100	90.847	ENSCJAG00000004266	BYSL	100	91.076	Callithrix_jacchus
ENSMUSG00000023988	Bysl	100	89.245	ENSCAFG00000001614	BYSL	100	89.245	Canis_familiaris
ENSMUSG00000023988	Bysl	100	89.245	ENSCAFG00020008426	BYSL	100	89.245	Canis_lupus_dingo
ENSMUSG00000023988	Bysl	100	91.762	ENSCHIG00000017590	BYSL	73	91.762	Capra_hircus
ENSMUSG00000023988	Bysl	100	90.847	ENSTSYG00000029904	BYSL	100	90.389	Carlito_syrichta
ENSMUSG00000023988	Bysl	67	95.918	ENSCAPG00000015987	BYSL	100	95.918	Cavia_aperea
ENSMUSG00000023988	Bysl	100	91.743	ENSCPOG00000004403	BYSL	100	91.743	Cavia_porcellus
ENSMUSG00000023988	Bysl	100	90.847	ENSCCAG00000036583	BYSL	100	91.076	Cebus_capucinus
ENSMUSG00000023988	Bysl	100	90.847	ENSCATG00000039266	BYSL	100	90.847	Cercocebus_atys
ENSMUSG00000023988	Bysl	100	92.661	ENSCLAG00000014143	BYSL	100	92.661	Chinchilla_lanigera
ENSMUSG00000023988	Bysl	100	90.847	ENSCSAG00000011306	BYSL	100	90.847	Chlorocebus_sabaeus
ENSMUSG00000023988	Bysl	72	95.111	ENSCHOG00000011476	BYSL	72	95.111	Choloepus_hoffmanni
ENSMUSG00000023988	Bysl	98	75.571	ENSCPBG00000017439	BYSL	98	74.886	Chrysemys_picta_bellii
ENSMUSG00000023988	Bysl	97	56.909	ENSCING00000001646	-	96	56.909	Ciona_intestinalis
ENSMUSG00000023988	Bysl	97	54.695	ENSCSAVG00000008659	-	96	54.695	Ciona_savignyi
ENSMUSG00000023988	Bysl	100	90.847	ENSCANG00000031335	BYSL	100	90.847	Colobus_angolensis_palliatus
ENSMUSG00000023988	Bysl	100	85.780	ENSCGRG00001006626	-	100	85.780	Cricetulus_griseus_chok1gshd
ENSMUSG00000023988	Bysl	59	95.522	ENSCGRG00001022668	-	86	95.522	Cricetulus_griseus_chok1gshd
ENSMUSG00000023988	Bysl	67	84.483	ENSCGRG00001007527	-	99	81.433	Cricetulus_griseus_chok1gshd
ENSMUSG00000023988	Bysl	64	91.549	ENSCGRG00001008990	-	91	91.549	Cricetulus_griseus_chok1gshd
ENSMUSG00000023988	Bysl	97	78.251	ENSCGRG00001010109	-	98	77.197	Cricetulus_griseus_chok1gshd
ENSMUSG00000023988	Bysl	67	79.866	ENSCGRG00000016274	-	100	79.866	Cricetulus_griseus_crigri
ENSMUSG00000023988	Bysl	99	86.079	ENSCGRG00000013448	-	98	86.079	Cricetulus_griseus_crigri
ENSMUSG00000023988	Bysl	67	72.789	ENSCGRG00000002253	-	100	72.789	Cricetulus_griseus_crigri
ENSMUSG00000023988	Bysl	100	86.425	ENSCGRG00000000072	-	100	86.652	Cricetulus_griseus_crigri
ENSMUSG00000023988	Bysl	97	87.765	ENSCGRG00000016761	-	99	87.765	Cricetulus_griseus_crigri
ENSMUSG00000023988	Bysl	100	74.661	ENSCSEG00000002246	bysl	95	74.661	Cynoglossus_semilaevis
ENSMUSG00000023988	Bysl	95	77.053	ENSCVAG00000023275	bysl	98	74.483	Cyprinodon_variegatus
ENSMUSG00000023988	Bysl	99	73.333	ENSDARG00000001057	bysl	90	73.333	Danio_rerio
ENSMUSG00000023988	Bysl	100	90.826	ENSDNOG00000016670	BYSL	100	90.826	Dasypus_novemcinctus
ENSMUSG00000023988	Bysl	100	93.349	ENSDORG00000010968	Bysl	100	93.349	Dipodomys_ordii
ENSMUSG00000023988	Bysl	95	51.799	FBgn0010292	bys	84	54.047	Drosophila_melanogaster
ENSMUSG00000023988	Bysl	99	68.837	ENSETEG00000018226	BYSL	98	68.837	Echinops_telfairi
ENSMUSG00000023988	Bysl	98	65.581	ENSEBUG00000000925	bysl	96	65.349	Eptatretus_burgeri
ENSMUSG00000023988	Bysl	100	91.304	ENSEASG00005003059	BYSL	100	90.160	Equus_asinus_asinus
ENSMUSG00000023988	Bysl	100	91.533	ENSECAG00000021260	BYSL	100	91.762	Equus_caballus
ENSMUSG00000023988	Bysl	94	75.181	ENSELUG00000014214	bysl	95	73.227	Esox_lucius
ENSMUSG00000023988	Bysl	100	91.514	ENSFCAG00000026154	BYSL	100	91.514	Felis_catus
ENSMUSG00000023988	Bysl	66	87.108	ENSFALG00000002897	BYSL	94	87.108	Ficedula_albicollis
ENSMUSG00000023988	Bysl	100	86.009	ENSFDAG00000014804	BYSL	100	86.009	Fukomys_damarensis
ENSMUSG00000023988	Bysl	95	77.404	ENSFHEG00000005147	bysl	98	74.944	Fundulus_heteroclitus
ENSMUSG00000023988	Bysl	98	72.222	ENSGMOG00000008061	bysl	98	71.759	Gadus_morhua
ENSMUSG00000023988	Bysl	97	73.488	ENSGALG00000003467	BYSL	98	73.068	Gallus_gallus
ENSMUSG00000023988	Bysl	95	74.408	ENSGAFG00000021598	bysl	99	71.812	Gambusia_affinis
ENSMUSG00000023988	Bysl	99	72.998	ENSGACG00000001059	bysl	98	72.998	Gasterosteus_aculeatus
ENSMUSG00000023988	Bysl	98	75.114	ENSGAGG00000017774	BYSL	98	74.429	Gopherus_agassizii
ENSMUSG00000023988	Bysl	100	90.618	ENSGGOG00000027046	BYSL	100	90.618	Gorilla_gorilla
ENSMUSG00000023988	Bysl	100	74.376	ENSHBUG00000002896	bysl	99	74.376	Haplochromis_burtoni
ENSMUSG00000023988	Bysl	100	91.514	ENSHGLG00000017479	BYSL	100	91.514	Heterocephalus_glaber_female
ENSMUSG00000023988	Bysl	100	91.514	ENSHGLG00100011829	BYSL	100	91.514	Heterocephalus_glaber_male
ENSMUSG00000023988	Bysl	99	71.198	ENSHCOG00000005390	bysl	98	71.198	Hippocampus_comes
ENSMUSG00000023988	Bysl	99	72.072	ENSIPUG00000017509	BYSL	99	71.847	Ictalurus_punctatus
ENSMUSG00000023988	Bysl	100	91.514	ENSSTOG00000021848	BYSL	99	91.514	Ictidomys_tridecemlineatus
ENSMUSG00000023988	Bysl	69	78.878	ENSJJAG00000003859	-	100	78.878	Jaculus_jaculus
ENSMUSG00000023988	Bysl	100	93.349	ENSJJAG00000023129	-	100	93.349	Jaculus_jaculus
ENSMUSG00000023988	Bysl	95	76.019	ENSKMAG00000021439	bysl	98	73.349	Kryptolebias_marmoratus
ENSMUSG00000023988	Bysl	99	72.523	ENSLOCG00000012661	bysl	99	72.870	Lepisosteus_oculatus
ENSMUSG00000023988	Bysl	89	91.473	ENSLAFG00000015418	BYSL	100	91.512	Loxodonta_africana
ENSMUSG00000023988	Bysl	100	90.847	ENSMFAG00000033214	BYSL	100	90.847	Macaca_fascicularis
ENSMUSG00000023988	Bysl	100	90.618	ENSMMUG00000004416	BYSL	99	90.618	Macaca_mulatta
ENSMUSG00000023988	Bysl	100	90.618	ENSMNEG00000043045	BYSL	100	90.618	Macaca_nemestrina
ENSMUSG00000023988	Bysl	100	90.847	ENSMLEG00000041724	BYSL	100	90.847	Mandrillus_leucophaeus
ENSMUSG00000023988	Bysl	99	73.684	ENSMAMG00000023910	bysl	98	73.684	Mastacembelus_armatus
ENSMUSG00000023988	Bysl	100	74.150	ENSMZEG00005011046	bysl	99	74.150	Maylandia_zebra
ENSMUSG00000023988	Bysl	58	87.302	ENSMGAG00000006299	BYSL	97	87.302	Meleagris_gallopavo
ENSMUSG00000023988	Bysl	67	96.135	ENSMAUG00000010845	Bysl	100	96.135	Mesocricetus_auratus
ENSMUSG00000023988	Bysl	100	91.076	ENSMICG00000011347	BYSL	100	91.304	Microcebus_murinus
ENSMUSG00000023988	Bysl	100	94.954	ENSMOCG00000002210	Bysl	100	94.954	Microtus_ochrogaster
ENSMUSG00000023988	Bysl	69	85.855	ENSMMOG00000021768	bysl	99	85.855	Mola_mola
ENSMUSG00000023988	Bysl	100	82.273	ENSMODG00000012808	BYSL	100	82.232	Monodelphis_domestica
ENSMUSG00000023988	Bysl	99	73.516	ENSMALG00000018147	bysl	98	73.516	Monopterus_albus
ENSMUSG00000023988	Bysl	100	97.248	MGP_CAROLIEiJ_G0021703	Bysl	100	97.248	Mus_caroli
ENSMUSG00000023988	Bysl	100	97.936	MGP_PahariEiJ_G0020693	Bysl	100	97.936	Mus_pahari
ENSMUSG00000023988	Bysl	100	99.541	MGP_SPRETEiJ_G0022615	Bysl	100	99.541	Mus_spretus
ENSMUSG00000023988	Bysl	100	89.703	ENSMPUG00000013486	BYSL	100	89.703	Mustela_putorius_furo
ENSMUSG00000023988	Bysl	100	91.762	ENSMLUG00000014028	BYSL	100	91.762	Myotis_lucifugus
ENSMUSG00000023988	Bysl	67	96.575	ENSNGAG00000005496	Bysl	100	96.575	Nannospalax_galili
ENSMUSG00000023988	Bysl	100	74.208	ENSNBRG00000006639	bysl	99	74.208	Neolamprologus_brichardi
ENSMUSG00000023988	Bysl	100	81.236	ENSNLEG00000032809	BYSL	100	81.236	Nomascus_leucogenys
ENSMUSG00000023988	Bysl	67	91.126	ENSMEUG00000000759	BYSL	100	91.126	Notamacropus_eugenii
ENSMUSG00000023988	Bysl	100	91.304	ENSOPRG00000015845	BYSL	100	91.304	Ochotona_princeps
ENSMUSG00000023988	Bysl	100	91.055	ENSODEG00000016059	BYSL	100	91.055	Octodon_degus
ENSMUSG00000023988	Bysl	100	73.923	ENSONIG00000018932	bysl	99	73.923	Oreochromis_niloticus
ENSMUSG00000023988	Bysl	100	92.220	ENSOCUG00000017567	BYSL	100	92.449	Oryctolagus_cuniculus
ENSMUSG00000023988	Bysl	100	73.349	ENSORLG00000000248	bysl	99	73.349	Oryzias_latipes
ENSMUSG00000023988	Bysl	100	73.121	ENSORLG00020008275	bysl	99	73.121	Oryzias_latipes_hni
ENSMUSG00000023988	Bysl	100	73.349	ENSORLG00015004475	bysl	99	73.349	Oryzias_latipes_hsok
ENSMUSG00000023988	Bysl	96	75.000	ENSOMEG00000015003	bysl	99	73.016	Oryzias_melastigma
ENSMUSG00000023988	Bysl	100	91.304	ENSOGAG00000015234	BYSL	100	90.847	Otolemur_garnettii
ENSMUSG00000023988	Bysl	85	90.957	ENSOARG00000002863	BYSL	100	90.957	Ovis_aries
ENSMUSG00000023988	Bysl	100	90.847	ENSPPAG00000028063	BYSL	100	90.847	Pan_paniscus
ENSMUSG00000023988	Bysl	100	91.514	ENSPPRG00000010500	BYSL	100	91.514	Panthera_pardus
ENSMUSG00000023988	Bysl	100	91.514	ENSPTIG00000010244	BYSL	100	91.514	Panthera_tigris_altaica
ENSMUSG00000023988	Bysl	100	90.847	ENSPTRG00000018163	BYSL	100	90.847	Pan_troglodytes
ENSMUSG00000023988	Bysl	100	90.618	ENSPANG00000007619	BYSL	100	90.618	Papio_anubis
ENSMUSG00000023988	Bysl	96	73.861	ENSPKIG00000001265	bysl	99	72.146	Paramormyrops_kingsleyae
ENSMUSG00000023988	Bysl	94	77.938	ENSPSIG00000009405	BYSL	98	75.515	Pelodiscus_sinensis
ENSMUSG00000023988	Bysl	99	73.148	ENSPMGG00000004006	bysl	98	73.148	Periophthalmus_magnuspinnatus
ENSMUSG00000023988	Bysl	100	94.495	ENSPEMG00000022283	Bysl	99	96.980	Peromyscus_maniculatus_bairdii
ENSMUSG00000023988	Bysl	75	78.723	ENSPMAG00000000953	bysl	96	78.507	Petromyzon_marinus
ENSMUSG00000023988	Bysl	100	82.232	ENSPCIG00000025889	BYSL	100	82.688	Phascolarctos_cinereus
ENSMUSG00000023988	Bysl	95	75.962	ENSPFOG00000000406	bysl	98	73.121	Poecilia_formosa
ENSMUSG00000023988	Bysl	95	75.962	ENSPLAG00000013506	bysl	98	73.121	Poecilia_latipinna
ENSMUSG00000023988	Bysl	95	76.202	ENSPMEG00000004461	bysl	98	73.349	Poecilia_mexicana
ENSMUSG00000023988	Bysl	95	74.880	ENSPREG00000004437	bysl	98	72.336	Poecilia_reticulata
ENSMUSG00000023988	Bysl	53	90.948	ENSPPYG00000017273	-	100	90.948	Pongo_abelii
ENSMUSG00000023988	Bysl	80	89.565	ENSPCAG00000004575	BYSL	80	89.565	Procavia_capensis
ENSMUSG00000023988	Bysl	100	90.847	ENSPCOG00000020727	-	100	91.076	Propithecus_coquereli
ENSMUSG00000023988	Bysl	100	75.744	ENSPCOG00000003664	-	100	75.744	Propithecus_coquereli
ENSMUSG00000023988	Bysl	100	90.618	ENSPVAG00000007606	BYSL	100	90.847	Pteropus_vampyrus
ENSMUSG00000023988	Bysl	100	74.376	ENSPNYG00000007839	bysl	99	74.376	Pundamilia_nyererei
ENSMUSG00000023988	Bysl	99	71.689	ENSPNAG00000010533	bysl	99	71.689	Pygocentrus_nattereri
ENSMUSG00000023988	Bysl	100	94.725	ENSRNOG00000049121	Bysl	100	94.725	Rattus_norvegicus
ENSMUSG00000023988	Bysl	100	90.618	ENSRBIG00000030183	BYSL	100	90.618	Rhinopithecus_bieti
ENSMUSG00000023988	Bysl	100	90.618	ENSRROG00000007843	-	100	90.618	Rhinopithecus_roxellana
ENSMUSG00000023988	Bysl	99	90.160	ENSRROG00000030276	-	99	91.142	Rhinopithecus_roxellana
ENSMUSG00000023988	Bysl	96	34.746	YBR247C	ENP1	87	38.571	Saccharomyces_cerevisiae
ENSMUSG00000023988	Bysl	100	90.389	ENSSBOG00000034517	BYSL	100	90.618	Saimiri_boliviensis_boliviensis
ENSMUSG00000023988	Bysl	100	82.313	ENSSHAG00000003954	BYSL	100	82.766	Sarcophilus_harrisii
ENSMUSG00000023988	Bysl	99	72.109	ENSSFOG00015016401	bysl	99	72.336	Scleropages_formosus
ENSMUSG00000023988	Bysl	95	73.270	ENSSMAG00000000371	bysl	98	72.210	Scophthalmus_maximus
ENSMUSG00000023988	Bysl	96	75.592	ENSSDUG00000009127	bysl	98	74.023	Seriola_dumerili
ENSMUSG00000023988	Bysl	96	75.592	ENSSLDG00000022707	bysl	98	74.023	Seriola_lalandi_dorsalis
ENSMUSG00000023988	Bysl	98	69.907	ENSSPUG00000007702	BYSL	98	69.676	Sphenodon_punctatus
ENSMUSG00000023988	Bysl	95	76.202	ENSSPAG00000013378	bysl	98	73.804	Stegastes_partitus
ENSMUSG00000023988	Bysl	100	87.185	ENSSSCG00000026752	BYSL	100	87.414	Sus_scrofa
ENSMUSG00000023988	Bysl	100	73.696	ENSTRUG00000008963	bysl	99	83.553	Takifugu_rubripes
ENSMUSG00000023988	Bysl	98	74.884	ENSTNIG00000014648	bysl	98	74.884	Tetraodon_nigroviridis
ENSMUSG00000023988	Bysl	67	94.539	ENSTBEG00000009332	-	67	94.539	Tupaia_belangeri
ENSMUSG00000023988	Bysl	100	81.465	ENSTTRG00000009429	BYSL	100	81.693	Tursiops_truncatus
ENSMUSG00000023988	Bysl	100	91.076	ENSUAMG00000027838	BYSL	100	91.304	Ursus_americanus
ENSMUSG00000023988	Bysl	100	82.993	ENSUMAG00000011988	BYSL	100	83.220	Ursus_maritimus
ENSMUSG00000023988	Bysl	81	90.909	ENSVPAG00000005678	BYSL	81	90.909	Vicugna_pacos
ENSMUSG00000023988	Bysl	100	89.245	ENSVVUG00000026680	BYSL	100	89.245	Vulpes_vulpes
ENSMUSG00000023988	Bysl	98	73.782	ENSXETG00000011846	bysl	99	73.086	Xenopus_tropicalis
ENSMUSG00000023988	Bysl	95	70.883	ENSXCOG00000003684	bysl	99	68.161	Xiphophorus_couchianus
ENSMUSG00000023988	Bysl	95	74.940	ENSXMAG00000001060	bysl	99	71.812	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	17242206.	IMP	Process
GO:0001701	in utero embryonic development	17055491.	IMP	Process
GO:0001825	blastocyst formation	17242206.	IMP	Process
GO:0001829	trophectodermal cell differentiation	17242206.	IMP	Process
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	17055491.17242206.	IDA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	17055491.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005881	cytoplasmic microtubule	-	ISO	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0007155	cell adhesion	11252172.	ISS	Process
GO:0008283	cell proliferation	17242206.	IMP	Process
GO:0030515	snoRNA binding	21873635.	IBA	Function
GO:0030688	preribosome, small subunit precursor	21873635.	IBA	Component
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0042995	cell projection	-	ISO	Component
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component
GO:0045177	apical part of cell	17055491.	IDA	Component
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component