EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024002 (Gene tree)
Gene ID: 57261
Gene Symbol: Brd4
Alias: HUNK1|MCAP|WI-11513
Full Name: bromodomain containing 4
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 88449
Position: chr17: 32196274-32284722
Accession: 1888520
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000121285	-	5922	XM_006524688	ENSMUSP00000113070	1400 (aa)	XP_006524751	Q9ESU6
ENSMUST00000125899	-	2118	-	ENSMUSP00000115277	146 (aa)	-	D6RGP2
ENSMUST00000127893	-	1910	-	ENSMUSP00000115163	557 (aa)	-	B0V2V6
ENSMUST00000230982	-	618	-	-	- (aa)	-	-
ENSMUST00000120276	-	4486	XM_006524695	ENSMUSP00000112474	723 (aa)	XP_006524758	Q9ESU6
ENSMUST00000230565	-	747	-	-	- (aa)	-	-
ENSMUST00000230858	-	507	-	ENSMUSP00000155477	169 (aa)	-	A0A2R8VHW4
ENSMUST00000003726	-	5957	XM_006524683	ENSMUSP00000003726	1401 (aa)	XP_006524746	Q3UH70
ENSMUST00000229020	-	438	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000024002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024002's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024002	Brd4	100	99.315	ENSG00000141867	BRD4	100	99.315	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000083	regulation of transcription involved in G1/S transition of mitotic cell cycle	-	ISO	Process
GO:0000790	nuclear chromatin	16339075.	IDA	Component
GO:0000794	condensed nuclear chromosome	10938129.16339075.18039861.	IDA	Component
GO:0000794	condensed nuclear chromosome	-	ISO	Component
GO:0001833	inner cell mass cell proliferation	11997514.	IMP	Process
GO:0003677	DNA binding	16109376.	IDA	Function
GO:0003682	chromatin binding	23154982.23752591.	IDA	Function
GO:0005515	protein binding	16109376.19103749.23154982.23752591.	IPI	Function
GO:0005634	nucleus	10938129.16109376.	IDA	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005730	nucleolus	16109376.	IDA	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0006468	protein phosphorylation	16109376.	IPI	Process
GO:0007059	chromosome segregation	16339075.	IMP	Process
GO:0008024	cyclin/CDK positive transcription elongation factor complex	23752591.	IDA	Component
GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	22509028.	IDA	Function
GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	22509028.	IMP	Function
GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	-	ISO	Function
GO:0010971	positive regulation of G2/M transition of mitotic cell cycle	-	ISO	Process
GO:0032968	positive regulation of transcription elongation from RNA polymerase II promoter	-	ISO	Process
GO:0034211	GTP-dependent protein kinase activity	22509028.	IDA	Function
GO:0043388	positive regulation of DNA binding	16109376.	IDA	Process
GO:0043983	histone H4-K12 acetylation	16339075.	IMP	Process
GO:0044154	histone H3-K14 acetylation	16339075.	IMP	Process
GO:0046777	protein autophosphorylation	22509028.	IDA	Process
GO:0099122	RNA polymerase II C-terminal domain binding	22509028.	IPI	Function
GO:0099122	RNA polymerase II C-terminal domain binding	-	ISO	Function