EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024081 (Gene tree)
Gene ID: 12607
Gene Symbol: Cebpz
Alias: CBF2|Cbf|Cebpa-rs1
Full Name: CCAAT/enhancer binding protein zeta
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 18061 bases
Position: chr17:78919006-78937066
Accession: 109386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000024885	CBF	PF03914.17	2.1e-56	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000024885	-	4070	XM_006523558	ENSMUSP00000024885	1052 (aa)	XP_006523621	A0A0R4J046
ENSMUST00000233371	-	464	-	-	- (aa)	-	-
ENSMUST00000232899	-	530	-	-	- (aa)	-	-
ENSMUST00000233484	-	2920	-	ENSMUSP00000156479	461 (aa)	-	UPI0000485141
ENSMUST00000233595	-	454	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000024081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024081	Cebpz	100	80.961	ENSG00000115816	CEBPZ	100	81.338	Homo_sapiens
ENSMUSG00000024081	Cebpz	97	56.526	ENSAPOG00000010013	cebpz	92	58.140	Acanthochromis_polyacanthus
ENSMUSG00000024081	Cebpz	100	81.426	ENSAMEG00000017580	CEBPZ	100	82.083	Ailuropoda_melanoleuca
ENSMUSG00000024081	Cebpz	96	57.495	ENSAOCG00000007301	cebpz	92	58.560	Amphiprion_ocellaris
ENSMUSG00000024081	Cebpz	96	57.659	ENSAPEG00000014644	cebpz	92	58.755	Amphiprion_percula
ENSMUSG00000024081	Cebpz	96	54.776	ENSATEG00000001538	cebpz	92	55.600	Anabas_testudineus
ENSMUSG00000024081	Cebpz	94	62.300	ENSAPLG00000014239	CEBPZ	98	63.179	Anas_platyrhynchos
ENSMUSG00000024081	Cebpz	96	64.115	ENSACAG00000001411	CEBPZ	96	65.392	Anolis_carolinensis
ENSMUSG00000024081	Cebpz	100	80.867	ENSANAG00000030775	CEBPZ	100	81.338	Aotus_nancymaae
ENSMUSG00000024081	Cebpz	93	56.849	ENSACLG00000006896	cebpz	93	57.532	Astatotilapia_calliptera
ENSMUSG00000024081	Cebpz	96	56.322	ENSAMXG00000018270	cebpz	97	57.156	Astyanax_mexicanus
ENSMUSG00000024081	Cebpz	100	81.775	ENSBTAG00000039770	CEBPZ	99	81.775	Bos_taurus
ENSMUSG00000024081	Cebpz	66	34.431	WBGene00009084	F23B12.7	86	33.254	Caenorhabditis_elegans
ENSMUSG00000024081	Cebpz	97	81.207	ENSCJAG00000003858	CEBPZ	99	81.207	Callithrix_jacchus
ENSMUSG00000024081	Cebpz	100	81.109	ENSCAFG00000006085	CEBPZ	100	81.579	Canis_familiaris
ENSMUSG00000024081	Cebpz	100	81.527	ENSCAFG00020022832	CEBPZ	100	81.998	Canis_lupus_dingo
ENSMUSG00000024081	Cebpz	100	80.831	ENSCHIG00000020789	CEBPZ	100	80.831	Capra_hircus
ENSMUSG00000024081	Cebpz	98	80.884	ENSTSYG00000005691	CEBPZ	100	80.412	Carlito_syrichta
ENSMUSG00000024081	Cebpz	95	75.893	ENSCAPG00000017127	CEBPZ	100	75.794	Cavia_aperea
ENSMUSG00000024081	Cebpz	100	79.717	ENSCPOG00000020778	CEBPZ	100	79.528	Cavia_porcellus
ENSMUSG00000024081	Cebpz	100	80.584	ENSCCAG00000036968	CEBPZ	100	80.867	Cebus_capucinus
ENSMUSG00000024081	Cebpz	100	81.209	ENSCATG00000030450	CEBPZ	100	81.844	Cercocebus_atys
ENSMUSG00000024081	Cebpz	100	80.057	ENSCLAG00000009453	CEBPZ	100	80.246	Chinchilla_lanigera
ENSMUSG00000024081	Cebpz	100	81.338	ENSCSAG00000012188	CEBPZ	100	81.715	Chlorocebus_sabaeus
ENSMUSG00000024081	Cebpz	62	72.495	ENSCHOG00000013012	-	61	73.674	Choloepus_hoffmanni
ENSMUSG00000024081	Cebpz	94	67.581	ENSCPBG00000023684	CEBPZ	95	67.937	Chrysemys_picta_bellii
ENSMUSG00000024081	Cebpz	58	37.107	ENSCING00000021688	-	97	37.107	Ciona_intestinalis
ENSMUSG00000024081	Cebpz	100	81.715	ENSCANG00000033300	CEBPZ	100	82.092	Colobus_angolensis_palliatus
ENSMUSG00000024081	Cebpz	100	88.783	ENSCGRG00001024288	Cebpz	100	88.783	Cricetulus_griseus_chok1gshd
ENSMUSG00000024081	Cebpz	100	88.783	ENSCGRG00000014269	Cebpz	100	88.783	Cricetulus_griseus_crigri
ENSMUSG00000024081	Cebpz	95	53.762	ENSCSEG00000005661	cebpz	91	54.970	Cynoglossus_semilaevis
ENSMUSG00000024081	Cebpz	83	57.162	ENSCVAG00000018541	cebpz	92	57.279	Cyprinodon_variegatus
ENSMUSG00000024081	Cebpz	98	56.214	ENSDARG00000045857	cebpz	93	57.256	Danio_rerio
ENSMUSG00000024081	Cebpz	100	80.943	ENSDNOG00000002209	CEBPZ	100	80.943	Dasypus_novemcinctus
ENSMUSG00000024081	Cebpz	99	79.567	ENSDORG00000027348	Cebpz	99	79.830	Dipodomys_ordii
ENSMUSG00000024081	Cebpz	95	77.151	ENSETEG00000002400	CEBPZ	100	77.448	Echinops_telfairi
ENSMUSG00000024081	Cebpz	93	46.191	ENSEBUG00000015764	cebpz	93	48.179	Eptatretus_burgeri
ENSMUSG00000024081	Cebpz	100	81.433	ENSEASG00005007345	CEBPZ	100	81.621	Equus_asinus_asinus
ENSMUSG00000024081	Cebpz	100	81.433	ENSECAG00000018957	CEBPZ	100	81.621	Equus_caballus
ENSMUSG00000024081	Cebpz	89	73.984	ENSEEUG00000013490	CEBPZ	89	73.713	Erinaceus_europaeus
ENSMUSG00000024081	Cebpz	96	56.518	ENSELUG00000015123	cebpz	93	57.115	Esox_lucius
ENSMUSG00000024081	Cebpz	98	80.464	ENSFCAG00000015764	CEBPZ	99	80.170	Felis_catus
ENSMUSG00000024081	Cebpz	98	62.024	ENSFALG00000011758	CEBPZ	96	65.656	Ficedula_albicollis
ENSMUSG00000024081	Cebpz	100	80.019	ENSFDAG00000002926	CEBPZ	100	80.019	Fukomys_damarensis
ENSMUSG00000024081	Cebpz	87	52.704	ENSFHEG00000012867	cebpz	97	53.145	Fundulus_heteroclitus
ENSMUSG00000024081	Cebpz	93	54.084	ENSGMOG00000017880	cebpz	98	53.678	Gadus_morhua
ENSMUSG00000024081	Cebpz	95	62.608	ENSGALG00000040335	CEBPZ	95	64.093	Gallus_gallus
ENSMUSG00000024081	Cebpz	96	51.328	ENSGAFG00000014306	cebpz	93	52.515	Gambusia_affinis
ENSMUSG00000024081	Cebpz	94	56.356	ENSGACG00000011855	cebpz	98	57.331	Gasterosteus_aculeatus
ENSMUSG00000024081	Cebpz	98	67.045	ENSGAGG00000024100	CEBPZ	95	67.546	Gopherus_agassizii
ENSMUSG00000024081	Cebpz	100	81.150	ENSGGOG00000011349	CEBPZ	100	81.527	Gorilla_gorilla
ENSMUSG00000024081	Cebpz	94	56.712	ENSHBUG00000004917	cebpz	93	57.711	Haplochromis_burtoni
ENSMUSG00000024081	Cebpz	100	77.620	ENSHGLG00000012838	CEBPZ	100	77.620	Heterocephalus_glaber_female
ENSMUSG00000024081	Cebpz	100	78.848	ENSHGLG00100005398	CEBPZ	100	78.848	Heterocephalus_glaber_male
ENSMUSG00000024081	Cebpz	97	48.993	ENSHCOG00000012132	cebpz	92	50.918	Hippocampus_comes
ENSMUSG00000024081	Cebpz	98	55.735	ENSIPUG00000006584	cebpz	93	57.879	Ictalurus_punctatus
ENSMUSG00000024081	Cebpz	100	82.092	ENSSTOG00000026177	CEBPZ	100	82.375	Ictidomys_tridecemlineatus
ENSMUSG00000024081	Cebpz	100	81.398	ENSJJAG00000011428	Cebpz	98	82.160	Jaculus_jaculus
ENSMUSG00000024081	Cebpz	96	52.431	ENSKMAG00000001280	cebpz	95	53.268	Kryptolebias_marmoratus
ENSMUSG00000024081	Cebpz	84	58.686	ENSLBEG00000023442	CEBPZ	94	58.791	Labrus_bergylta
ENSMUSG00000024081	Cebpz	93	61.287	ENSLACG00000012928	CEBPZ	96	61.366	Latimeria_chalumnae
ENSMUSG00000024081	Cebpz	97	60.615	ENSLOCG00000016867	cebpz	94	61.462	Lepisosteus_oculatus
ENSMUSG00000024081	Cebpz	100	81.562	ENSLAFG00000000953	CEBPZ	100	81.750	Loxodonta_africana
ENSMUSG00000024081	Cebpz	100	81.664	ENSMFAG00000042567	CEBPZ	100	81.827	Macaca_fascicularis
ENSMUSG00000024081	Cebpz	100	81.569	ENSMMUG00000016433	CEBPZ	100	81.733	Macaca_mulatta
ENSMUSG00000024081	Cebpz	100	81.380	ENSMNEG00000039414	CEBPZ	100	81.638	Macaca_nemestrina
ENSMUSG00000024081	Cebpz	98	82.160	ENSMLEG00000031611	CEBPZ	100	81.844	Mandrillus_leucophaeus
ENSMUSG00000024081	Cebpz	95	55.787	ENSMAMG00000019826	cebpz	91	56.322	Mastacembelus_armatus
ENSMUSG00000024081	Cebpz	93	56.751	ENSMZEG00005013159	cebpz	93	57.434	Maylandia_zebra
ENSMUSG00000024081	Cebpz	95	61.873	ENSMGAG00000011280	CEBPZ	95	63.822	Meleagris_gallopavo
ENSMUSG00000024081	Cebpz	100	86.502	ENSMAUG00000008610	Cebpz	100	86.502	Mesocricetus_auratus
ENSMUSG00000024081	Cebpz	100	81.056	ENSMICG00000003324	CEBPZ	100	81.621	Microcebus_murinus
ENSMUSG00000024081	Cebpz	100	87.833	ENSMOCG00000018640	Cebpz	100	87.833	Microtus_ochrogaster
ENSMUSG00000024081	Cebpz	96	52.703	ENSMMOG00000017553	cebpz	92	53.930	Mola_mola
ENSMUSG00000024081	Cebpz	99	69.281	ENSMODG00000023074	CEBPZ	99	69.496	Monodelphis_domestica
ENSMUSG00000024081	Cebpz	98	52.046	ENSMALG00000010892	cebpz	89	62.034	Monopterus_albus
ENSMUSG00000024081	Cebpz	75	97.985	MGP_CAROLIEiJ_G0021891	-	77	97.985	Mus_caroli
ENSMUSG00000024081	Cebpz	100	98.954	MGP_SPRETEiJ_G0022806	Cebpz	100	98.954	Mus_spretus
ENSMUSG00000024081	Cebpz	100	81.433	ENSMPUG00000010216	CEBPZ	96	81.904	Mustela_putorius_furo
ENSMUSG00000024081	Cebpz	100	80.320	ENSMLUG00000008929	CEBPZ	100	80.320	Myotis_lucifugus
ENSMUSG00000024081	Cebpz	100	85.701	ENSNGAG00000015241	Cebpz	100	85.511	Nannospalax_galili
ENSMUSG00000024081	Cebpz	87	57.895	ENSNBRG00000008466	cebpz	95	53.110	Neolamprologus_brichardi
ENSMUSG00000024081	Cebpz	100	80.490	ENSNLEG00000016237	CEBPZ	100	80.773	Nomascus_leucogenys
ENSMUSG00000024081	Cebpz	83	77.778	ENSMEUG00000011839	-	82	77.778	Notamacropus_eugenii
ENSMUSG00000024081	Cebpz	90	74.059	ENSOPRG00000008189	CEBPZ	92	74.059	Ochotona_princeps
ENSMUSG00000024081	Cebpz	58	78.704	ENSODEG00000011002	-	99	79.074	Octodon_degus
ENSMUSG00000024081	Cebpz	94	57.438	ENSONIG00000018713	cebpz	93	58.424	Oreochromis_niloticus
ENSMUSG00000024081	Cebpz	99	65.631	ENSOANG00000005120	CEBPZ	98	66.378	Ornithorhynchus_anatinus
ENSMUSG00000024081	Cebpz	100	80.907	ENSOCUG00000007230	CEBPZ	100	80.907	Oryctolagus_cuniculus
ENSMUSG00000024081	Cebpz	96	56.135	ENSORLG00000017177	cebpz	93	57.300	Oryzias_latipes
ENSMUSG00000024081	Cebpz	96	56.027	ENSORLG00020001900	cebpz	94	56.296	Oryzias_latipes_hni
ENSMUSG00000024081	Cebpz	96	56.316	ENSORLG00015019923	cebpz	93	56.890	Oryzias_latipes_hsok
ENSMUSG00000024081	Cebpz	97	55.123	ENSOMEG00000019691	cebpz	93	57.242	Oryzias_melastigma
ENSMUSG00000024081	Cebpz	100	80.657	ENSOGAG00000002565	CEBPZ	100	81.127	Otolemur_garnettii
ENSMUSG00000024081	Cebpz	100	80.961	ENSOARG00000009540	CEBPZ	99	80.961	Ovis_aries
ENSMUSG00000024081	Cebpz	100	80.302	ENSPPAG00000043370	CEBPZ	100	80.679	Pan_paniscus
ENSMUSG00000024081	Cebpz	98	81.836	ENSPPRG00000003326	CEBPZ	99	81.509	Panthera_pardus
ENSMUSG00000024081	Cebpz	98	81.836	ENSPTIG00000014858	CEBPZ	99	81.509	Panthera_tigris_altaica
ENSMUSG00000024081	Cebpz	100	80.396	ENSPTRG00000011836	CEBPZ	100	80.773	Pan_troglodytes
ENSMUSG00000024081	Cebpz	100	81.758	ENSPANG00000015853	CEBPZ	100	82.015	Papio_anubis
ENSMUSG00000024081	Cebpz	98	56.682	ENSPKIG00000023192	cebpz	94	58.014	Paramormyrops_kingsleyae
ENSMUSG00000024081	Cebpz	96	66.988	ENSPSIG00000006455	CEBPZ	96	68.473	Pelodiscus_sinensis
ENSMUSG00000024081	Cebpz	78	56.923	ENSPMGG00000017825	cebpz	91	49.503	Periophthalmus_magnuspinnatus
ENSMUSG00000024081	Cebpz	100	89.544	ENSPEMG00000017978	Cebpz	100	89.544	Peromyscus_maniculatus_bairdii
ENSMUSG00000024081	Cebpz	99	70.539	ENSPCIG00000007283	CEBPZ	98	71.510	Phascolarctos_cinereus
ENSMUSG00000024081	Cebpz	96	52.229	ENSPFOG00000003831	cebpz	95	53.990	Poecilia_formosa
ENSMUSG00000024081	Cebpz	96	52.519	ENSPLAG00000016264	cebpz	95	54.581	Poecilia_latipinna
ENSMUSG00000024081	Cebpz	96	52.224	ENSPMEG00000013419	cebpz	95	53.687	Poecilia_mexicana
ENSMUSG00000024081	Cebpz	89	52.526	ENSPREG00000012387	cebpz	94	53.403	Poecilia_reticulata
ENSMUSG00000024081	Cebpz	100	80.867	ENSPPYG00000012491	CEBPZ	100	81.244	Pongo_abelii
ENSMUSG00000024081	Cebpz	91	78.505	ENSPCAG00000012718	CEBPZ	100	78.609	Procavia_capensis
ENSMUSG00000024081	Cebpz	97	82.074	ENSPCOG00000017899	CEBPZ	100	81.527	Propithecus_coquereli
ENSMUSG00000024081	Cebpz	80	79.221	ENSPVAG00000013834	CEBPZ	82	79.128	Pteropus_vampyrus
ENSMUSG00000024081	Cebpz	94	53.221	ENSPNYG00000001483	cebpz	92	54.734	Pundamilia_nyererei
ENSMUSG00000024081	Cebpz	98	55.243	ENSPNAG00000010829	cebpz	93	57.478	Pygocentrus_nattereri
ENSMUSG00000024081	Cebpz	100	92.776	ENSRNOG00000005087	Cebpz	100	92.586	Rattus_norvegicus
ENSMUSG00000024081	Cebpz	98	81.286	ENSRBIG00000035805	CEBPZ	99	81.328	Rhinopithecus_bieti
ENSMUSG00000024081	Cebpz	100	81.792	ENSRROG00000045300	CEBPZ	100	81.792	Rhinopithecus_roxellana
ENSMUSG00000024081	Cebpz	100	80.885	ENSSBOG00000032043	CEBPZ	100	81.356	Saimiri_boliviensis_boliviensis
ENSMUSG00000024081	Cebpz	99	70.121	ENSSHAG00000010396	CEBPZ	92	70.885	Sarcophilus_harrisii
ENSMUSG00000024081	Cebpz	95	58.046	ENSSFOG00015001353	cebpz	93	58.570	Scleropages_formosus
ENSMUSG00000024081	Cebpz	96	56.000	ENSSMAG00000007770	cebpz	92	56.463	Scophthalmus_maximus
ENSMUSG00000024081	Cebpz	95	56.405	ENSSDUG00000013019	cebpz	92	57.834	Seriola_dumerili
ENSMUSG00000024081	Cebpz	95	57.116	ENSSLDG00000021173	cebpz	92	57.971	Seriola_lalandi_dorsalis
ENSMUSG00000024081	Cebpz	97	66.508	ENSSPUG00000017394	CEBPZ	96	67.549	Sphenodon_punctatus
ENSMUSG00000024081	Cebpz	100	78.888	ENSSSCG00000008493	CEBPZ	100	79.925	Sus_scrofa
ENSMUSG00000024081	Cebpz	96	63.158	ENSTGUG00000008585	CEBPZ	95	64.775	Taeniopygia_guttata
ENSMUSG00000024081	Cebpz	93	54.249	ENSTRUG00000015584	CEBPZ	94	55.420	Takifugu_rubripes
ENSMUSG00000024081	Cebpz	98	80.288	ENSTBEG00000012108	CEBPZ	100	79.925	Tupaia_belangeri
ENSMUSG00000024081	Cebpz	100	80.925	ENSTTRG00000006886	CEBPZ	100	81.398	Tursiops_truncatus
ENSMUSG00000024081	Cebpz	91	81.686	ENSUAMG00000006489	CEBPZ	99	81.686	Ursus_americanus
ENSMUSG00000024081	Cebpz	100	82.187	ENSUMAG00000014757	CEBPZ	100	82.846	Ursus_maritimus
ENSMUSG00000024081	Cebpz	100	80.831	ENSVPAG00000003306	CEBPZ	100	80.831	Vicugna_pacos
ENSMUSG00000024081	Cebpz	96	81.576	ENSVVUG00000018894	CEBPZ	95	82.365	Vulpes_vulpes
ENSMUSG00000024081	Cebpz	96	57.951	ENSXETG00000000654	cebpz	96	58.202	Xenopus_tropicalis
ENSMUSG00000024081	Cebpz	93	51.300	ENSXMAG00000007499	cebpz	98	53.586	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISO	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process