EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024268 (Gene tree)
Gene ID: 108013
Gene Symbol: Celf4
Alias: A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik
Full Name: CUGBP%2C Elav-like family member 4
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 276526 bases
Position: chr18:25477632-25754157
Accession: 1932407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000025117	RRM_1	PF00076.22	8.6e-53	1	3
ENSMUSP00000025117	RRM_1	PF00076.22	8.6e-53	2	3
ENSMUSP00000025117	RRM_1	PF00076.22	8.6e-53	3	3
ENSMUSP00000111483	RRM_1	PF00076.22	9.4e-53	1	3
ENSMUSP00000111483	RRM_1	PF00076.22	9.4e-53	2	3
ENSMUSP00000111483	RRM_1	PF00076.22	9.4e-53	3	3
ENSMUSP00000153226	RRM_1	PF00076.22	8e-43	1	3
ENSMUSP00000153226	RRM_1	PF00076.22	8e-43	2	3
ENSMUSP00000153226	RRM_1	PF00076.22	8e-43	3	3
ENSMUSP00000153326	RRM_1	PF00076.22	8.1e-43	1	3
ENSMUSP00000153326	RRM_1	PF00076.22	8.1e-43	2	3
ENSMUSP00000153326	RRM_1	PF00076.22	8.1e-43	3	3
ENSMUSP00000153258	RRM_1	PF00076.22	5.1e-42	1	3
ENSMUSP00000153258	RRM_1	PF00076.22	5.1e-42	2	3
ENSMUSP00000153258	RRM_1	PF00076.22	5.1e-42	3	3

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000025117	-	2899	XM_006525508	ENSMUSP00000025117	495 (aa)	XP_006525571	Q7TSY6
ENSMUST00000223704	-	2492	XM_006525510	ENSMUSP00000153326	485 (aa)	XP_006525573	Q7TSY6
ENSMUST00000225927	-	518	-	-	- (aa)	-	-
ENSMUST00000224028	-	1699	-	-	- (aa)	-	-
ENSMUST00000224553	-	1729	XM_006525515	ENSMUSP00000153258	456 (aa)	XP_006525578	Q7TSY6
ENSMUST00000225528	-	413	-	ENSMUSP00000153706	19 (aa)	-	A0A286YE56
ENSMUST00000224143	-	3236	-	-	- (aa)	-	-
ENSMUST00000225477	-	2626	XM_006525520	ENSMUSP00000153226	484 (aa)	XP_017173273	Q7TSY6
ENSMUST00000115816	-	3995	XM_006525511	ENSMUSP00000111483	504 (aa)	XP_006525574	Q7TSY6
ENSMUST00000226091	-	324	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000024268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000024268	Celf4	91	37.037	ENSMUSG00000008489	Elavl2	88	39.506
ENSMUSG00000024268	Celf4	99	68.966	ENSMUSG00000032297	Celf6	97	72.778
ENSMUSG00000024268	Celf4	67	39.744	ENSMUSG00000003410	Elavl3	70	39.506
ENSMUSG00000024268	Celf4	95	47.244	ENSMUSG00000002107	Celf2	92	54.472
ENSMUSG00000024268	Celf4	62	33.028	ENSMUSG00000011257	Pabpc4	93	33.803
ENSMUSG00000024268	Celf4	63	30.682	ENSMUSG00000071337	Tia1	87	32.911
ENSMUSG00000024268	Celf4	88	97.619	ENSMUSG00000028137	Celf3	84	97.619
ENSMUSG00000024268	Celf4	73	36.232	ENSMUSG00000040028	Elavl1	95	43.210
ENSMUSG00000024268	Celf4	94	46.061	ENSMUSG00000005506	Celf1	100	45.344
ENSMUSG00000024268	Celf4	91	35.802	ENSMUSG00000028546	Elavl4	88	38.272
ENSMUSG00000024268	Celf4	68	40.789	ENSMUSG00000039607	Rbms3	72	40.789
ENSMUSG00000024268	Celf4	62	36.842	ENSMUSG00000046173	Pabpc6	62	36.842
ENSMUSG00000024268	Celf4	81	64.770	ENSMUSG00000034818	Celf5	93	83.721
ENSMUSG00000024268	Celf4	58	35.227	ENSMUSG00000051732	Pabpc2	61	36.145

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024268	Celf4	100	99.588	ENSG00000101489	CELF4	100	100.000	Homo_sapiens
ENSMUSG00000024268	Celf4	99	80.712	ENSAPOG00000002964	celf4	100	77.903	Acanthochromis_polyacanthus
ENSMUSG00000024268	Celf4	92	97.636	ENSAMEG00000017059	CELF4	100	97.539	Ailuropoda_melanoleuca
ENSMUSG00000024268	Celf4	99	80.088	ENSACIG00000018097	celf4	100	79.869	Amphilophus_citrinellus
ENSMUSG00000024268	Celf4	59	69.231	ENSAOCG00000019919	-	80	67.647	Amphiprion_ocellaris
ENSMUSG00000024268	Celf4	99	83.843	ENSAOCG00000020590	celf4	100	83.843	Amphiprion_ocellaris
ENSMUSG00000024268	Celf4	99	83.696	ENSAPEG00000002940	celf4	99	83.696	Amphiprion_percula
ENSMUSG00000024268	Celf4	99	83.624	ENSATEG00000023731	celf4	100	83.624	Anabas_testudineus
ENSMUSG00000024268	Celf4	69	85.676	ENSAPLG00000007830	-	100	85.676	Anas_platyrhynchos
ENSMUSG00000024268	Celf4	100	99.588	ENSANAG00000029499	CELF4	100	99.588	Aotus_nancymaae
ENSMUSG00000024268	Celf4	99	86.720	ENSACLG00000011828	celf4	100	83.702	Astatotilapia_calliptera
ENSMUSG00000024268	Celf4	100	83.660	ENSAMXG00000007935	celf4	100	83.442	Astyanax_mexicanus
ENSMUSG00000024268	Celf4	100	97.119	ENSBTAG00000004940	CELF4	99	100.000	Bos_taurus
ENSMUSG00000024268	Celf4	100	99.588	ENSCJAG00000021135	CELF4	100	99.588	Callithrix_jacchus
ENSMUSG00000024268	Celf4	100	97.119	ENSCHIG00000007169	CELF4	99	100.000	Capra_hircus
ENSMUSG00000024268	Celf4	93	99.449	ENSTSYG00000000816	CELF4	85	99.449	Carlito_syrichta
ENSMUSG00000024268	Celf4	100	94.643	ENSCPOG00000035956	CELF4	100	94.643	Cavia_porcellus
ENSMUSG00000024268	Celf4	100	99.588	ENSCCAG00000028373	CELF4	100	99.588	Cebus_capucinus
ENSMUSG00000024268	Celf4	100	99.588	ENSCATG00000045293	CELF4	100	99.588	Cercocebus_atys
ENSMUSG00000024268	Celf4	100	99.603	ENSCLAG00000008344	CELF4	100	99.603	Chinchilla_lanigera
ENSMUSG00000024268	Celf4	89	99.157	ENSCSAG00000017933	CELF4	99	99.157	Chlorocebus_sabaeus
ENSMUSG00000024268	Celf4	87	98.214	ENSCPBG00000005237	CELF4	93	98.214	Chrysemys_picta_bellii
ENSMUSG00000024268	Celf4	100	99.588	ENSCANG00000036735	CELF4	100	99.588	Colobus_angolensis_palliatus
ENSMUSG00000024268	Celf4	76	89.610	ENSCGRG00001018085	Celf4	89	89.610	Cricetulus_griseus_chok1gshd
ENSMUSG00000024268	Celf4	99	80.712	ENSCSEG00000007074	celf4	99	92.857	Cynoglossus_semilaevis
ENSMUSG00000024268	Celf4	100	83.007	ENSCVAG00000017617	celf4	100	83.333	Cyprinodon_variegatus
ENSMUSG00000024268	Celf4	99	80.224	ENSDARG00000070045	celf4	100	80.779	Danio_rerio
ENSMUSG00000024268	Celf4	88	98.056	ENSDNOG00000032492	CELF4	99	96.467	Dasypus_novemcinctus
ENSMUSG00000024268	Celf4	100	99.603	ENSDORG00000007169	Celf4	100	99.603	Dipodomys_ordii
ENSMUSG00000024268	Celf4	93	98.658	ENSETEG00000007432	-	74	98.658	Echinops_telfairi
ENSMUSG00000024268	Celf4	100	97.325	ENSEASG00005016534	CELF4	100	97.325	Equus_asinus_asinus
ENSMUSG00000024268	Celf4	100	99.588	ENSECAG00000008810	CELF4	100	99.588	Equus_caballus
ENSMUSG00000024268	Celf4	91	78.378	ENSEEUG00000003763	CELF4	100	79.279	Erinaceus_europaeus
ENSMUSG00000024268	Celf4	100	97.325	ENSFCAG00000045234	CELF4	100	97.325	Felis_catus
ENSMUSG00000024268	Celf4	89	98.315	ENSFALG00000009188	CELF4	99	97.759	Ficedula_albicollis
ENSMUSG00000024268	Celf4	100	94.048	ENSFDAG00000010287	CELF4	100	94.048	Fukomys_damarensis
ENSMUSG00000024268	Celf4	99	75.519	ENSFHEG00000003431	celf4	99	76.495	Fundulus_heteroclitus
ENSMUSG00000024268	Celf4	99	65.619	ENSGMOG00000008703	celf4	88	91.892	Gadus_morhua
ENSMUSG00000024268	Celf4	82	92.683	ENSGMOG00000011747	-	75	92.683	Gadus_morhua
ENSMUSG00000024268	Celf4	51	79.375	ENSGALG00000050344	-	75	90.769	Gallus_gallus
ENSMUSG00000024268	Celf4	99	80.519	ENSGAFG00000021515	celf4	99	76.268	Gambusia_affinis
ENSMUSG00000024268	Celf4	99	74.624	ENSGACG00000008752	celf4	100	74.248	Gasterosteus_aculeatus
ENSMUSG00000024268	Celf4	89	65.000	ENSGAGG00000017672	-	99	64.651	Gopherus_agassizii
ENSMUSG00000024268	Celf4	61	97.611	ENSGAGG00000023014	-	98	97.611	Gopherus_agassizii
ENSMUSG00000024268	Celf4	100	99.588	ENSGGOG00000013920	CELF4	100	99.588	Gorilla_gorilla
ENSMUSG00000024268	Celf4	99	86.519	ENSHBUG00000021618	celf4	100	83.903	Haplochromis_burtoni
ENSMUSG00000024268	Celf4	100	99.587	ENSHGLG00000003130	CELF4	100	99.587	Heterocephalus_glaber_female
ENSMUSG00000024268	Celf4	100	99.008	ENSHGLG00100006394	CELF4	100	99.008	Heterocephalus_glaber_male
ENSMUSG00000024268	Celf4	100	82.213	ENSHCOG00000012195	celf4	100	81.996	Hippocampus_comes
ENSMUSG00000024268	Celf4	99	77.846	ENSIPUG00000010810	celf4	97	78.344	Ictalurus_punctatus
ENSMUSG00000024268	Celf4	100	98.810	ENSJJAG00000016892	Celf4	100	98.810	Jaculus_jaculus
ENSMUSG00000024268	Celf4	99	79.963	ENSKMAG00000019602	celf4	100	77.365	Kryptolebias_marmoratus
ENSMUSG00000024268	Celf4	100	83.585	ENSLBEG00000000940	celf4	100	83.585	Labrus_bergylta
ENSMUSG00000024268	Celf4	93	76.658	ENSLOCG00000004792	celf4	99	75.676	Lepisosteus_oculatus
ENSMUSG00000024268	Celf4	100	99.405	ENSLAFG00000021352	CELF4	100	99.405	Loxodonta_africana
ENSMUSG00000024268	Celf4	100	99.588	ENSMFAG00000042983	CELF4	100	99.588	Macaca_fascicularis
ENSMUSG00000024268	Celf4	100	99.381	ENSMMUG00000006866	CELF4	100	99.381	Macaca_mulatta
ENSMUSG00000024268	Celf4	100	97.325	ENSMNEG00000033449	CELF4	100	97.325	Macaca_nemestrina
ENSMUSG00000024268	Celf4	92	93.392	ENSMLEG00000028543	CELF4	99	93.392	Mandrillus_leucophaeus
ENSMUSG00000024268	Celf4	100	83.117	ENSMAMG00000018573	celf4	99	83.117	Mastacembelus_armatus
ENSMUSG00000024268	Celf4	100	80.043	ENSMZEG00005026879	celf4	100	79.826	Maylandia_zebra
ENSMUSG00000024268	Celf4	64	71.609	ENSMGAG00000017029	CELF4	99	71.609	Meleagris_gallopavo
ENSMUSG00000024268	Celf4	100	99.381	ENSMICG00000006984	CELF4	100	99.381	Microcebus_murinus
ENSMUSG00000024268	Celf4	100	99.802	ENSMOCG00000011985	Celf4	100	99.802	Microtus_ochrogaster
ENSMUSG00000024268	Celf4	99	82.328	ENSMMOG00000012281	celf4	100	82.759	Mola_mola
ENSMUSG00000024268	Celf4	84	88.439	ENSMODG00000000306	CELF4	91	88.439	Monodelphis_domestica
ENSMUSG00000024268	Celf4	99	86.720	ENSMALG00000001696	celf4	100	83.702	Monopterus_albus
ENSMUSG00000024268	Celf4	100	100.000	MGP_CAROLIEiJ_G0022058	Celf4	100	100.000	Mus_caroli
ENSMUSG00000024268	Celf4	100	100.000	MGP_PahariEiJ_G0018792	Celf4	100	100.000	Mus_pahari
ENSMUSG00000024268	Celf4	100	100.000	MGP_SPRETEiJ_G0022969	Celf4	100	100.000	Mus_spretus
ENSMUSG00000024268	Celf4	93	79.097	ENSMPUG00000001027	CELF4	100	81.295	Mustela_putorius_furo
ENSMUSG00000024268	Celf4	89	97.043	ENSMLUG00000001755	CELF4	100	97.043	Myotis_lucifugus
ENSMUSG00000024268	Celf4	100	99.603	ENSNGAG00000000761	Celf4	100	99.603	Nannospalax_galili
ENSMUSG00000024268	Celf4	100	80.043	ENSNBRG00000018194	celf4	100	79.826	Neolamprologus_brichardi
ENSMUSG00000024268	Celf4	80	87.931	ENSMEUG00000007202	-	100	87.931	Notamacropus_eugenii
ENSMUSG00000024268	Celf4	100	83.539	ENSOPRG00000014415	CELF4	100	84.362	Ochotona_princeps
ENSMUSG00000024268	Celf4	100	99.802	ENSODEG00000018464	CELF4	100	99.802	Octodon_degus
ENSMUSG00000024268	Celf4	99	84.725	ENSONIG00000019463	celf4	100	84.521	Oreochromis_niloticus
ENSMUSG00000024268	Celf4	92	96.854	ENSOCUG00000024790	CELF4	81	99.539	Oryctolagus_cuniculus
ENSMUSG00000024268	Celf4	99	83.478	ENSORLG00000008913	celf4	100	83.261	Oryzias_latipes
ENSMUSG00000024268	Celf4	99	80.337	ENSORLG00020008454	celf4	100	77.903	Oryzias_latipes_hni
ENSMUSG00000024268	Celf4	99	81.489	ENSORLG00015004115	celf4	100	81.288	Oryzias_latipes_hsok
ENSMUSG00000024268	Celf4	99	83.151	ENSOMEG00000002391	celf4	100	82.932	Oryzias_melastigma
ENSMUSG00000024268	Celf4	93	87.294	ENSOGAG00000010018	CELF4	100	88.000	Otolemur_garnettii
ENSMUSG00000024268	Celf4	63	97.771	ENSOARG00000005276	CELF4	100	97.771	Ovis_aries
ENSMUSG00000024268	Celf4	92	97.137	ENSPPAG00000020644	CELF4	99	97.137	Pan_paniscus
ENSMUSG00000024268	Celf4	100	99.588	ENSPPRG00000007683	CELF4	100	99.588	Panthera_pardus
ENSMUSG00000024268	Celf4	100	99.588	ENSPTRG00000009982	CELF4	100	99.588	Pan_troglodytes
ENSMUSG00000024268	Celf4	100	99.588	ENSPANG00000006365	CELF4	100	99.588	Papio_anubis
ENSMUSG00000024268	Celf4	100	82.035	ENSPKIG00000017421	celf4	100	82.251	Paramormyrops_kingsleyae
ENSMUSG00000024268	Celf4	89	98.315	ENSPSIG00000015538	CELF4	99	97.759	Pelodiscus_sinensis
ENSMUSG00000024268	Celf4	100	100.000	ENSPEMG00000019299	Celf4	100	100.000	Peromyscus_maniculatus_bairdii
ENSMUSG00000024268	Celf4	80	81.843	ENSPLAG00000012151	celf4	89	83.424	Poecilia_latipinna
ENSMUSG00000024268	Celf4	87	92.857	ENSPMEG00000015313	celf4	97	92.857	Poecilia_mexicana
ENSMUSG00000024268	Celf4	99	87.273	ENSPREG00000021231	celf4	100	84.242	Poecilia_reticulata
ENSMUSG00000024268	Celf4	88	99.479	ENSPCAG00000000126	CELF4	83	99.479	Procavia_capensis
ENSMUSG00000024268	Celf4	100	99.588	ENSPVAG00000009204	CELF4	100	99.588	Pteropus_vampyrus
ENSMUSG00000024268	Celf4	100	80.043	ENSPNYG00000004131	celf4	100	79.826	Pundamilia_nyererei
ENSMUSG00000024268	Celf4	99	87.475	ENSPNAG00000006426	celf4	100	84.444	Pygocentrus_nattereri
ENSMUSG00000024268	Celf4	83	98.176	ENSRNOG00000014503	Celf4	100	98.176	Rattus_norvegicus
ENSMUSG00000024268	Celf4	100	97.325	ENSRBIG00000035924	CELF4	100	97.325	Rhinopithecus_bieti
ENSMUSG00000024268	Celf4	100	99.588	ENSRROG00000014839	CELF4	100	99.588	Rhinopithecus_roxellana
ENSMUSG00000024268	Celf4	100	98.765	ENSSBOG00000030001	CELF4	100	98.765	Saimiri_boliviensis_boliviensis
ENSMUSG00000024268	Celf4	84	93.617	ENSSHAG00000009193	CELF4	96	92.570	Sarcophilus_harrisii
ENSMUSG00000024268	Celf4	99	82.435	ENSSFOG00015010874	celf4	100	81.437	Scleropages_formosus
ENSMUSG00000024268	Celf4	99	84.980	ENSSMAG00000009331	celf4	100	92.857	Scophthalmus_maximus
ENSMUSG00000024268	Celf4	99	73.196	ENSSLDG00000018548	celf4	100	71.371	Seriola_lalandi_dorsalis
ENSMUSG00000024268	Celf4	99	75.464	ENSSPAG00000018307	celf4	100	76.289	Stegastes_partitus
ENSMUSG00000024268	Celf4	100	99.383	ENSSSCG00000003748	CELF4	100	100.000	Sus_scrofa
ENSMUSG00000024268	Celf4	89	98.315	ENSTGUG00000001649	CELF4	99	97.759	Taeniopygia_guttata
ENSMUSG00000024268	Celf4	99	80.131	ENSTRUG00000015481	celf4	100	80.349	Takifugu_rubripes
ENSMUSG00000024268	Celf4	99	78.304	ENSTNIG00000010679	celf4	99	79.042	Tetraodon_nigroviridis
ENSMUSG00000024268	Celf4	86	99.104	ENSTBEG00000010647	CELF4	100	85.476	Tupaia_belangeri
ENSMUSG00000024268	Celf4	100	99.383	ENSTTRG00000016826	CELF4	100	99.383	Tursiops_truncatus
ENSMUSG00000024268	Celf4	82	98.837	ENSUAMG00000005506	CELF4	83	98.837	Ursus_americanus
ENSMUSG00000024268	Celf4	68	66.296	ENSVPAG00000009042	-	88	67.778	Vicugna_pacos
ENSMUSG00000024268	Celf4	100	97.119	ENSVVUG00000027721	CELF4	100	97.119	Vulpes_vulpes
ENSMUSG00000024268	Celf4	93	95.393	ENSXETG00000020486	celf4	99	98.305	Xenopus_tropicalis
ENSMUSG00000024268	Celf4	89	84.236	ENSXCOG00000017592	celf4	97	80.328	Xiphophorus_couchianus
ENSMUSG00000024268	Celf4	99	86.974	ENSXMAG00000018178	celf4	100	83.968	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	ISO	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	11158314.	IDA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	23932931.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005634	nucleus	11158314.	ISS	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	23932931.	IDA	Component
GO:0006376	mRNA splice site selection	21873635.	IBA	Process
GO:0006376	mRNA splice site selection	11158314.	IDA	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0036002	pre-mRNA binding	-	ISO	Function
GO:0048025	negative regulation of mRNA splicing, via spliceosome	23636947.	IMP	Process
GO:0048026	positive regulation of mRNA splicing, via spliceosome	-	ISO	Process
GO:0090394	negative regulation of excitatory postsynaptic potential	21745337.	IMP	Process
GO:1902866	regulation of retina development in camera-type eye	23932931.	IEP	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component