EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024312 (Gene tree)
Gene ID: 57315
Gene Symbol: Wdr46
Alias: 2310007I04Rik|Bing4
Full Name: WD repeat domain 46
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 9038
Position: chr17: 33940660-33949697
Accession: 1931871
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000025170	-	2229	XM_006524697	ENSMUSP00000025170	622 (aa)	XP_006524760	Q9Z0H1
ENSMUST00000234334	-	1396	-	ENSMUSP00000157147	329 (aa)	-	-
ENSMUST00000173857	-	533	-	-	- (aa)	-	-
ENSMUST00000172546	-	604	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000024312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024312's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024312	Wdr46	98	84.829	ENSG00000227057	WDR46	100	84.829	Homo_sapiens
ENSMUSG00000024312	Wdr46	81	42.804	YER082C	UTP7	83	41.164	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0032040	small-subunit processome	21873635.	IBA	Component