EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000234107	-	2422	XM_006526117	ENSMUSP00000157102	245 (aa)	XP_006526180	UPI00000222F6
ENSMUST00000072847	-	3002	-	ENSMUSP00000072626	209 (aa)	-	Q9CQE0
ENSMUST00000234545	-	1769	XM_006526118	ENSMUSP00000157123	179 (aa)	XP_006526181	-
ENSMUST00000234169	-	6766	-	-	- (aa)	-	-
ENSMUST00000052396	-	2769	-	ENSMUSP00000056641	209 (aa)	-	Q9CQE0
ENSMUST00000234536	-	2271	-	ENSMUSP00000157047	245 (aa)	-	UPI00000222F6

Gene Model

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000724	double-strand break repair via homologous recombination	21873635.	IBA	Process
GO:0000724	double-strand break repair via homologous recombination	-	ISO	Process
GO:0003677	DNA binding	-	IEA	Function
GO:0003697	single-stranded DNA binding	21873635.	IBA	Function
GO:0003697	single-stranded DNA binding	-	ISO	Function
GO:0005694	chromosome	-	IEA	Component
GO:0006281	DNA repair	-	IEA	Process
GO:0006974	cellular response to DNA damage stimulus	-	IEA	Process
GO:0010792	DNA double-strand break processing involved in repair via single-strand annealing	21873635.	IBA	Process
GO:0010792	DNA double-strand break processing involved in repair via single-strand annealing	-	ISO	Process
GO:0016055	Wnt signaling pathway	-	IEA	Process
GO:0016567	protein ubiquitination	-	ISO	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0019901	protein kinase binding	-	ISO	Function
GO:0035861	site of double-strand break	21873635.	IBA	Component
GO:0035861	site of double-strand break	-	ISO	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0061630	ubiquitin protein ligase activity	21873635.	IBA	Function
GO:0061630	ubiquitin protein ligase activity	-	ISO	Function
GO:1990830	cellular response to leukemia inhibitory factor	20439489.	IEP	Process