EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024335 (Gene tree)
Gene ID: 14312
Gene Symbol: Brd2
Alias: D17H6S113E|Frg-1|Fsrg1|Ring3|Rnf3
Full Name: bromodomain containing 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 10612
Position: chr17: 34112023-34122634
Accession: 99495
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000173204	-	771	-	ENSMUSP00000138431	64 (aa)	-	S4R1Z1
ENSMUST00000151986	-	4482	-	ENSMUSP00000117359	473 (aa)	-	I7HPW1
ENSMUST00000142570	-	961	-	-	- (aa)	-	-
ENSMUST00000179722	-	463	-	-	- (aa)	-	-
ENSMUST00000177828	-	396	-	-	- (aa)	-	-
ENSMUST00000154232	-	4520	-	ENSMUSP00000128835	146 (aa)	-	Q3TH63
ENSMUST00000114242	-	4483	XM_017317248	ENSMUSP00000109880	798 (aa)	XP_017172737	Q7JJ13
ENSMUST00000173032	-	406	-	ENSMUSP00000134608	136 (aa)	-	G3UZR9
ENSMUST00000155286	-	610	-	-	- (aa)	-	-
ENSMUST00000025193	-	4374	XM_017317245	ENSMUSP00000025193	798 (aa)	XP_017172734	Q7JJ13
ENSMUST00000179687	-	366	-	-	- (aa)	-	-
ENSMUST00000148143	-	683	-	-	- (aa)	-	-
ENSMUST00000095347	-	2617	XM_017317254	ENSMUSP00000092990	406 (aa)	XP_017172743	U3KLT0

Gene Model

Click here to download ENSMUSG00000024335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024335's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024335	Brd2	98	100.000	ENSG00000204256	BRD2	100	98.551	Homo_sapiens
ENSMUSG00000024335	Brd2	95	81.967	ENSG00000169925	BRD3	88	74.242	Homo_sapiens
ENSMUSG00000024335	Brd2	95	83.607	ENSMUSG00000026918	Brd3	91	75.904	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003682	chromatin binding	-	ISO	Function
GO:0005634	nucleus	15063089.	IDA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	15063089.	IDA	Component
GO:0006325	chromatin organization	-	IEA	Process
GO:0006334	nucleosome assembly	-	ISO	Process
GO:0006357	regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0016607	nuclear speck	-	ISO	Component
GO:0070577	lysine-acetylated histone binding	-	ISO	Function