EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024359 (Gene tree)
Gene ID: 15526
Gene Symbol: Hspa9
Alias: C3H-specific antigen|CSA|GRP75|Hsc74|Hsp74|Hsp74a|Hspa9a|PBP74|mortalin|mot-2|mthsp70
Full Name: heat shock protein 9
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 16929
Position: chr18: 34937423-34954351
Accession: 96245
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000025217	-	3034	-	ENSMUSP00000025217	679 (aa)	-	P38647

Gene Model

Click here to download ENSMUSG00000024359's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03018	RNA degradation	KEGG
mmu05152	Tuberculosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024359's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024359	Hspa9	93	77.338	WBGene00002010	hsp-6	96	77.338	Caenorhabditis_elegans
ENSMUSG00000024359	Hspa9	94	77.865	FBgn0001220	Hsc70-5	95	76.829	Drosophila_melanogaster
ENSMUSG00000024359	Hspa9	100	98.380	ENSG00000113013	HSPA9	100	100.000	Homo_sapiens
ENSMUSG00000024359	Hspa9	91	66.613	YJR045C	SSC1	94	66.613	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0005515	protein binding	11900485.14993262.	IPI	Function
GO:0005524	ATP binding	21873635.	IBA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005737	cytoplasm	11900485.	TAS	Component
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	12931191.14993262.	IDA	Component
GO:0005739	mitochondrion	7896880.	ISO	Component
GO:0005759	mitochondrial matrix	11092755.	IDA	Component
GO:0006457	protein folding	-	IEA	Process
GO:0006611	protein export from nucleus	11900485.	IDA	Process
GO:0006986	response to unfolded protein	21873635.	IBA	Process
GO:0016226	iron-sulfur cluster assembly	26702583.	IMP	Process
GO:0016226	iron-sulfur cluster assembly	-	ISO	Process
GO:0016887	ATPase activity	21873635.	IBA	Function
GO:0017134	fibroblast growth factor binding	-	ISO	Function
GO:0019899	enzyme binding	12646231.	IPI	Function
GO:0030218	erythrocyte differentiation	-	ISO	Process
GO:0031072	heat shock protein binding	21873635.	IBA	Function
GO:0031072	heat shock protein binding	-	ISO	Function
GO:0031625	ubiquitin protein ligase binding	-	ISO	Function
GO:0034605	cellular response to heat	21873635.	IBA	Process
GO:0034620	cellular response to unfolded protein	21873635.	IBA	Process
GO:0042026	protein refolding	21873635.	IBA	Process
GO:0042623	ATPase activity, coupled	21873635.	IBA	Function
GO:0042645	mitochondrial nucleoid	-	ISO	Component
GO:0043209	myelin sheath	17634366.	HDA	Component
GO:0044183	protein binding involved in protein folding	21873635.	IBA	Function
GO:0045646	regulation of erythrocyte differentiation	-	ISO	Process
GO:0045647	negative regulation of erythrocyte differentiation	-	ISO	Process
GO:0046777	protein autophosphorylation	-	ISO	Process
GO:0051082	unfolded protein binding	21873635.	IBA	Function
GO:0051085	chaperone cofactor-dependent protein refolding	21873635.	IBA	Process
GO:0051087	chaperone binding	-	ISO	Function
GO:0051787	misfolded protein binding	21873635.	IBA	Function
GO:0060548	negative regulation of cell death	-	ISO	Process
GO:1902037	negative regulation of hematopoietic stem cell differentiation	21123823.	IMP	Process
GO:1903707	negative regulation of hemopoiesis	21123823.	IMP	Process