EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000024369 (Gene tree)
Gene ID: 27632
Gene Symbol: Nelfe
Alias: NELF-E|Rdbp
Full Name: negative elongation factor complex member E%2C Rdbp
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 5982 bases
Position: chr17:34850391-34856372
Accession: 102744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000094956	RRM_1	PF00076.22	5.4e-11	1	1
ENSMUSP00000131195	RRM_1	PF00076.22	5.4e-11	1	1
ENSMUSP00000134272	RRM_1	PF00076.22	5.4e-11	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000173775	-	499	-	-	- (aa)	-	-
ENSMUST00000097343	-	1607	-	ENSMUSP00000094956	367 (aa)	-	P19426
ENSMUST00000173065	-	961	-	ENSMUSP00000133934	228 (aa)	-	G3UY39
ENSMUST00000174888	-	425	-	-	- (aa)	-	-
ENSMUST00000173357	-	1399	-	ENSMUSP00000134272	367 (aa)	-	P19426
ENSMUST00000165953	-	1381	-	ENSMUSP00000131195	367 (aa)	-	P19426
ENSMUST00000174075	-	420	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000024369's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000024369's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000024369	Nelfe	100	91.644	ENSG00000204356	NELFE	100	94.340	Homo_sapiens
ENSMUSG00000024369	Nelfe	50	48.529	ENSCSAVG00000004231	-	67	48.529	Ciona_savignyi
ENSMUSG00000024369	Nelfe	100	89.974	ENSCANG00000022451	NELFE	98	90.296	Colobus_angolensis_palliatus
ENSMUSG00000024369	Nelfe	93	79.412	ENSDNOG00000006996	-	94	79.091	Dasypus_novemcinctus
ENSMUSG00000024369	Nelfe	100	45.924	ENSEBUG00000017070	nelfe	99	58.659	Eptatretus_burgeri
ENSMUSG00000024369	Nelfe	72	96.296	ENSEEUG00000005004	NELFE	67	96.296	Erinaceus_europaeus
ENSMUSG00000024369	Nelfe	100	57.407	ENSELUG00000005830	nelfe	72	74.227	Esox_lucius
ENSMUSG00000024369	Nelfe	100	63.859	ENSGALG00000045676	NELFE	94	77.778	Gallus_gallus
ENSMUSG00000024369	Nelfe	100	61.580	ENSGACG00000002935	nelfe	52	66.082	Gasterosteus_aculeatus
ENSMUSG00000024369	Nelfe	74	87.407	ENSHGLG00000016601	NELFE	92	83.883	Heterocephalus_glaber_female
ENSMUSG00000024369	Nelfe	100	92.683	ENSSTOG00000027409	NELFE	98	91.826	Ictidomys_tridecemlineatus
ENSMUSG00000024369	Nelfe	93	89.884	ENSJJAG00000014005	Nelfe	91	89.851	Jaculus_jaculus
ENSMUSG00000024369	Nelfe	100	91.644	ENSLAFG00000028155	NELFE	93	99.219	Loxodonta_africana
ENSMUSG00000024369	Nelfe	100	91.914	ENSMFAG00000036108	-	98	90.027	Macaca_fascicularis
ENSMUSG00000024369	Nelfe	100	91.914	ENSMMUG00000000735	-	98	90.027	Macaca_mulatta
ENSMUSG00000024369	Nelfe	100	93.188	ENSMNEG00000032542	NELFE	98	93.188	Macaca_nemestrina
ENSMUSG00000024369	Nelfe	87	58.284	ENSMGAG00000001297	NELFE	75	73.810	Meleagris_gallopavo
ENSMUSG00000024369	Nelfe	82	90.698	ENSMODG00000015063	NELFE	93	90.625	Monodelphis_domestica
ENSMUSG00000024369	Nelfe	100	97.855	MGP_CAROLIEiJ_G0021478	Nelfe	100	97.855	Mus_caroli
ENSMUSG00000024369	Nelfe	100	98.103	MGP_PahariEiJ_G0020473	Nelfe	100	98.103	Mus_pahari
ENSMUSG00000024369	Nelfe	100	97.855	MGP_SPRETEiJ_G0022383	Nelfe	100	97.855	Mus_spretus
ENSMUSG00000024369	Nelfe	61	73.469	ENSOMEG00000008581	nelfe	66	73.469	Oryzias_melastigma
ENSMUSG00000024369	Nelfe	100	61.035	ENSPKIG00000012048	nelfe	75	77.241	Paramormyrops_kingsleyae
ENSMUSG00000024369	Nelfe	66	89.837	ENSPCAG00000004108	NELFE	65	88.618	Procavia_capensis
ENSMUSG00000024369	Nelfe	100	97.561	ENSRNOG00000000420	Nelfe	100	97.561	Rattus_norvegicus
ENSMUSG00000024369	Nelfe	100	83.424	ENSRBIG00000028593	-	98	85.870	Rhinopithecus_bieti
ENSMUSG00000024369	Nelfe	100	58.809	ENSSFOG00015017039	nelfe	99	60.490	Scleropages_formosus
ENSMUSG00000024369	Nelfe	100	92.643	ENSTTRG00000005923	NELFE	98	92.643	Tursiops_truncatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005515	protein binding	22579285.26010750.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006355	regulation of transcription, DNA-templated	-	IEA	Process
GO:0016604	nuclear body	-	ISO	Component
GO:0032021	NELF complex	-	ISO	Component
GO:0034244	negative regulation of transcription elongation from RNA polymerase II promoter	21670248.	IMP	Process
GO:1900364	negative regulation of mRNA polyadenylation	-	ISO	Process